Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
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Accession | NC_010581 |
Length | 4,170,153 |
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The map label for this gene is gltX [H]
Identifier: 182677429
GI number: 182677429
Start: 487082
End: 487984
Strand: Direct
Name: gltX [H]
Synonym: Bind_0433
Alternate gene names: 182677429
Gene position: 487082-487984 (Clockwise)
Preceding gene: 182677427
Following gene: 182677431
Centisome position: 11.68
GC content: 57.7
Gene sequence:
>903_bases ATGACCCACGCCTGTCCTCAGTCTGCCTTTCGCTTCGCTCCCTCGCCCAATGGCTATCTGCATCTCGGTCACGCTTTTTC GGCGCTCGAAAATGAGCGTCTGGCGCGTTTGAACGGGGGCCGTCTCTTCTTGCGAATCGAAAATATCGATGTCGATCGCT GCCGGCCGGAATATGAACGCGCGATTCTCGAGGATCTGACCTGGCTTGGTATCGCGCTGGAGCCCGAAGTGCGGCGGCAG TCCGAGCATTTCGACGATTATGCACAAGCCCTGGACCGGCTCGCGCGGATGGGCCTCATCTATCCCTGTTTCTGTTCCCG TACTGACATCATGCAGAAGATACGGGAACGGGCCTTTTGGGCGCGCGATCCTGACGGATCGCCGCTTTATCCCGGCACCT GCAAACATCTTCCAAAGGACAAAATCCAGGAGCGCCTGGAGGCTGGCGAGCCGGCCTCTTATCGCCTCGACATGGGCAAA GCCTTGAATCTGATTGGTTATAGGCTCGGCTGGACCGAATTTGGTTCCGGGATGGTCGGTCGCTTCGTACAGGCTAGTCC GCAGAAATGGGGGGATACCATTCTGGCCCGCAAGGATATTGCGACGAGCTATCACATTGCCGTCGTCGTTGACGATGCCT TGCAACGGATCACTGATATCGTACGCGGCGAAGATTTGTTCCAGGCGACCAGTCTGCACCGGCTGTTGCAAAGCCTGTTG GGCTTGCCTGAACCGGCCTATCACCATCACGGGCTGCTGCGTGATGCCTCTGGCCAGAAATTGTCGAAAAGTCTCAGAGC CAAATCCTTGCGTGCCTTGCGCGAGGAAGGATTATCCCCGAAAGCAGTGCGCGCCAAACTGGCGCCACTGCCCCCTCTCA TCGCCGCTTTGCAAACGGTTTGA
Upstream 100 bases:
>100_bases ATCCGATTTCGGCTGAATGAGGGATGCGTGAGCTTGGCTCGTTGCCATTTCGAATTCTGGCCGGGATGTTTCCTGCCTCT GTCCGTCCCCGAAGTAAGCC
Downstream 100 bases:
>100_bases AATCAAGCCGTTTGAATCGGTCGCTATTCAGCGGCGCTTTTGGCGCCGCCGAAACGCCGCTCGATATAATCCTGAACGAT GGTCTTGAATTCGGCGGCTA
Product: glutamyl-tRNA synthetase class Ic
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS [H]
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MTHACPQSAFRFAPSPNGYLHLGHAFSALENERLARLNGGRLFLRIENIDVDRCRPEYERAILEDLTWLGIALEPEVRRQ SEHFDDYAQALDRLARMGLIYPCFCSRTDIMQKIRERAFWARDPDGSPLYPGTCKHLPKDKIQERLEAGEPASYRLDMGK ALNLIGYRLGWTEFGSGMVGRFVQASPQKWGDTILARKDIATSYHIAVVVDDALQRITDIVRGEDLFQATSLHRLLQSLL GLPEPAYHHHGLLRDASGQKLSKSLRAKSLRALREEGLSPKAVRAKLAPLPPLIAALQTV
Sequences:
>Translated_300_residues MTHACPQSAFRFAPSPNGYLHLGHAFSALENERLARLNGGRLFLRIENIDVDRCRPEYERAILEDLTWLGIALEPEVRRQ SEHFDDYAQALDRLARMGLIYPCFCSRTDIMQKIRERAFWARDPDGSPLYPGTCKHLPKDKIQERLEAGEPASYRLDMGK ALNLIGYRLGWTEFGSGMVGRFVQASPQKWGDTILARKDIATSYHIAVVVDDALQRITDIVRGEDLFQATSLHRLLQSLL GLPEPAYHHHGLLRDASGQKLSKSLRAKSLRALREEGLSPKAVRAKLAPLPPLIAALQTV >Mature_299_residues THACPQSAFRFAPSPNGYLHLGHAFSALENERLARLNGGRLFLRIENIDVDRCRPEYERAILEDLTWLGIALEPEVRRQS EHFDDYAQALDRLARMGLIYPCFCSRTDIMQKIRERAFWARDPDGSPLYPGTCKHLPKDKIQERLEAGEPASYRLDMGKA LNLIGYRLGWTEFGSGMVGRFVQASPQKWGDTILARKDIATSYHIAVVVDDALQRITDIVRGEDLFQATSLHRLLQSLLG LPEPAYHHHGLLRDASGQKLSKSLRAKSLRALREEGLSPKAVRAKLAPLPPLIAALQTV
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) [H]
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=286, Percent_Identity=30.4195804195804, Blast_Score=118, Evalue=6e-27, Organism=Escherichia coli, GI1788743, Length=280, Percent_Identity=32.1428571428571, Blast_Score=137, Evalue=1e-33, Organism=Escherichia coli, GI226510925, Length=290, Percent_Identity=33.448275862069, Blast_Score=112, Evalue=3e-26, Organism=Caenorhabditis elegans, GI71993394, Length=284, Percent_Identity=28.5211267605634, Blast_Score=95, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6324540, Length=275, Percent_Identity=32.3636363636364, Blast_Score=128, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6324742, Length=309, Percent_Identity=23.9482200647249, Blast_Score=69, Evalue=6e-13, Organism=Drosophila melanogaster, GI24665321, Length=298, Percent_Identity=33.5570469798658, Blast_Score=137, Evalue=8e-33,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008925 - InterPro: IPR020752 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: =6.1.1.17 [H]
Molecular weight: Translated: 33787; Mature: 33656
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHACPQSAFRFAPSPNGYLHLGHAFSALENERLARLNGGRLFLRIENIDVDRCRPEYER CCCCCCCHHHCCCCCCCCEEEECHHHHHHHHHHHHEECCCEEEEEEECCCHHHCCHHHHH AILEDLTWLGIALEPEVRRQSEHFDDYAQALDRLARMGLIYPCFCSRTDIMQKIRERAFW HHHHHHHHHCEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHCC ARDPDGSPLYPGTCKHLPKDKIQERLEAGEPASYRLDMGKALNLIGYRLGWTEFGSGMVG CCCCCCCCCCCCHHCCCCHHHHHHHHHCCCCCCEEECHHHHHHHHHHHCCHHHHCCCHHH RFVQASPQKWGDTILARKDIATSYHIAVVVDDALQRITDIVRGEDLFQATSLHRLLQSLL HHHHCCCHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH GLPEPAYHHHGLLRDASGQKLSKSLRAKSLRALREEGLSPKAVRAKLAPLPPLIAALQTV CCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHCC >Mature Secondary Structure THACPQSAFRFAPSPNGYLHLGHAFSALENERLARLNGGRLFLRIENIDVDRCRPEYER CCCCCCHHHCCCCCCCCEEEECHHHHHHHHHHHHEECCCEEEEEEECCCHHHCCHHHHH AILEDLTWLGIALEPEVRRQSEHFDDYAQALDRLARMGLIYPCFCSRTDIMQKIRERAFW HHHHHHHHHCEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHCC ARDPDGSPLYPGTCKHLPKDKIQERLEAGEPASYRLDMGKALNLIGYRLGWTEFGSGMVG CCCCCCCCCCCCHHCCCCHHHHHHHHHCCCCCCEEECHHHHHHHHHHHCCHHHHCCCHHH RFVQASPQKWGDTILARKDIATSYHIAVVVDDALQRITDIVRGEDLFQATSLHRLLQSLL HHHHCCCHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH GLPEPAYHHHGLLRDASGQKLSKSLRAKSLRALREEGLSPKAVRAKLAPLPPLIAALQTV CCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]