Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
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Accession | NC_010581 |
Length | 4,170,153 |
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The map label for this gene is exoN [H]
Identifier: 182677431
GI number: 182677431
Start: 490212
End: 491099
Strand: Direct
Name: exoN [H]
Synonym: Bind_0435
Alternate gene names: 182677431
Gene position: 490212-491099 (Clockwise)
Preceding gene: 182677429
Following gene: 182677433
Centisome position: 11.76
GC content: 54.17
Gene sequence:
>888_bases ATGACCACGCCGATTCGCAAAGCCGTTTTTCCCGTCGCCGGTCTTGGCACTCGATTTCTGCCCGCTACCAAATCTGTTCC GAAGGAAATGCTGACCGTGGTCGATCGGCCGGTCCTCCAGCATGTGGTCGATGAAGCCCGCGAAGCCGGTATTGAACATT TCATTTTCGTCACCGGCCGCAACAAGGCCGTTATCGAAGATCATTTCGACATTGCTTATGAGCTTCAGGACACTTTGCTG AAGCGCAATAAAATTAAAGAATATGACGCTTTGATCGCTGATCTGCCGAAGCCTGGCGCGACGAGCTTCACCCGCCAGCA AGCGCCGCTGGGTCTTGGTCATGCCGTCTGGTGTGCCCGCGATATTGTGGGACATGAACCGTTTGCGGTTCTGTTGCCGG ATATGATCACCCTAAAGGATGATGGCAAAGGCCGTTGCCTTGCGCAATGTATTGCAGCCTATAACAAACATGGGGGTAAT ATTATCGCCACGGAGGAAGTGCCTGCTGACGAAACTCATCAATATGGCGTCGTCGGGCTCGGCAAGGATTATGGCGATAC GTTCGAGATTACCGGAATGGTCGAGAAGCCGGCCAAGGGGACCGCGCCTTCCAACCTGATCATCTCCGGCCGCTATGTCC TCGGTCCTGAGATTTTCGAGATTCTCGAACACGGGGAGAAGGGCGCTGGCGGTGAAATTCAATTGACCGATGGCATGAAG ACCTTGGCTGAATCACAAGCATTTCACGGTGTGCGTTTCAGCGGCAGGACGTTCGATTGCGGCTCGAAACTGGGTTTCCT CGCTGCCAATGTCGCTTTTGCTCTGGCCAATCCCGAGATCGGTCCGGGTTTCGCCGCCGATTTGAAAAAGATTGTCGGCA CTCTGTGA
Upstream 100 bases:
>100_bases AAGCAGAATTCGAAAATCCTGCCCAGGCTGTTTCGTTTCAAACAAGGCTGACCACCTTGCTGATTCCCTTGCTCCGTCCA GTATTCAATCAGGATAGAAA
Downstream 100 bases:
>100_bases ATGTATTGATGACAGCATCGAGCCTGGACGTGTTCAGGCTCGATGATCTTTATGGCCATGTATTCTGTGATCGTGTAGCG GGCTGAGCTAGGGATTGGTC
Product: UTP-glucose-1-phosphate uridylyltransferase
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MTTPIRKAVFPVAGLGTRFLPATKSVPKEMLTVVDRPVLQHVVDEAREAGIEHFIFVTGRNKAVIEDHFDIAYELQDTLL KRNKIKEYDALIADLPKPGATSFTRQQAPLGLGHAVWCARDIVGHEPFAVLLPDMITLKDDGKGRCLAQCIAAYNKHGGN IIATEEVPADETHQYGVVGLGKDYGDTFEITGMVEKPAKGTAPSNLIISGRYVLGPEIFEILEHGEKGAGGEIQLTDGMK TLAESQAFHGVRFSGRTFDCGSKLGFLAANVAFALANPEIGPGFAADLKKIVGTL
Sequences:
>Translated_295_residues MTTPIRKAVFPVAGLGTRFLPATKSVPKEMLTVVDRPVLQHVVDEAREAGIEHFIFVTGRNKAVIEDHFDIAYELQDTLL KRNKIKEYDALIADLPKPGATSFTRQQAPLGLGHAVWCARDIVGHEPFAVLLPDMITLKDDGKGRCLAQCIAAYNKHGGN IIATEEVPADETHQYGVVGLGKDYGDTFEITGMVEKPAKGTAPSNLIISGRYVLGPEIFEILEHGEKGAGGEIQLTDGMK TLAESQAFHGVRFSGRTFDCGSKLGFLAANVAFALANPEIGPGFAADLKKIVGTL >Mature_294_residues TTPIRKAVFPVAGLGTRFLPATKSVPKEMLTVVDRPVLQHVVDEAREAGIEHFIFVTGRNKAVIEDHFDIAYELQDTLLK RNKIKEYDALIADLPKPGATSFTRQQAPLGLGHAVWCARDIVGHEPFAVLLPDMITLKDDGKGRCLAQCIAAYNKHGGNI IATEEVPADETHQYGVVGLGKDYGDTFEITGMVEKPAKGTAPSNLIISGRYVLGPEIFEILEHGEKGAGGEIQLTDGMKT LAESQAFHGVRFSGRTFDCGSKLGFLAANVAFALANPEIGPGFAADLKKIVGTL
Specific function: May Play A Role In Stationary Phase Survival. [C]
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Homo sapiens, GI11761621, Length=271, Percent_Identity=26.9372693726937, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI11761619, Length=271, Percent_Identity=26.9372693726937, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI1787488, Length=298, Percent_Identity=41.9463087248322, Blast_Score=219, Evalue=1e-58, Organism=Escherichia coli, GI1788355, Length=296, Percent_Identity=38.8513513513513, Blast_Score=204, Evalue=5e-54,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 31767; Mature: 31636
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPIRKAVFPVAGLGTRFLPATKSVPKEMLTVVDRPVLQHVVDEAREAGIEHFIFVTGR CCCCHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECC NKAVIEDHFDIAYELQDTLLKRNKIKEYDALIADLPKPGATSFTRQQAPLGLGHAVWCAR CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHH DIVGHEPFAVLLPDMITLKDDGKGRCLAQCIAAYNKHGGNIIATEEVPADETHQYGVVGL HHHCCCCCEEECCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEC GKDYGDTFEITGMVEKPAKGTAPSNLIISGRYVLGPEIFEILEHGEKGAGGEIQLTDGMK CCCCCCCEEEEEEEECCCCCCCCCCEEEECCEEECHHHHHHHHCCCCCCCCEEEECCHHH TLAESQAFHGVRFSGRTFDCGSKLGFLAANVAFALANPEIGPGFAADLKKIVGTL HHHHHHHHCCEEECCCEECCCCCHHHHHHHHEEEECCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure TTPIRKAVFPVAGLGTRFLPATKSVPKEMLTVVDRPVLQHVVDEAREAGIEHFIFVTGR CCCHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECC NKAVIEDHFDIAYELQDTLLKRNKIKEYDALIADLPKPGATSFTRQQAPLGLGHAVWCAR CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHHHHHH DIVGHEPFAVLLPDMITLKDDGKGRCLAQCIAAYNKHGGNIIATEEVPADETHQYGVVGL HHHCCCCCEEECCCEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEC GKDYGDTFEITGMVEKPAKGTAPSNLIISGRYVLGPEIFEILEHGEKGAGGEIQLTDGMK CCCCCCCEEEEEEEECCCCCCCCCCEEEECCEEECHHHHHHHHCCCCCCCCEEEECCHHH TLAESQAFHGVRFSGRTFDCGSKLGFLAANVAFALANPEIGPGFAADLKKIVGTL HHHHHHHHCCEEECCCEECCCCCHHHHHHHHEEEECCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8226645; 8226646; 8246891; 11481431 [H]