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The map label for this gene is yjbG [H]

Identifier: 182677367

GI number: 182677367

Start: 425554

End: 427422

Strand: Direct

Name: yjbG [H]

Synonym: Bind_0370

Alternate gene names: 182677367

Gene position: 425554-427422 (Clockwise)

Preceding gene: 182677365

Following gene: 182677368

Centisome position: 10.2

GC content: 56.98

Gene sequence:

>1869_bases
ATGTCTCTCATTCATTCCTTGCTGTCCCGCAACTTCCTTGATTTTCCACGAGATCCTGCCCAAGCGGGGCAGGGTGCGCC
CGCCGTTGCGCTTGGGACCTTGCCGGAATGGAACCTCGCCGATCTCTATCCGGCGCCGGATTCCCCCCTTTTCGCGCGCG
ATCTCGCCCATGCCGTGGCCGAGGCTAAGGCTTTTGCGGAGGCCTATAAGGGCCGGCTGGAAACATTGGCGATGGATCCT
TCCAGCACGGGCCTGATCGAGGCCGTGCGCCGCTATGAGACGGTTGAGGAATTGCTTGGCCGGCTCATGTCCTATGCCGG
TCTGCATTATTACGGCGATACGAGCGATGCGGCGCGCGCCAAATTCTATGGTGACACACATGAGGAAATCACCAAGGCCT
CTTCCGATCTCCTGTTCTTCGAGCTCGAATTGAACCGTCTTGACGACGCTTTGATCGAAAAGGCTCTCAAGGGCACGCCG
CTTGAACATTACCGGCCCTGGATCGAGGATATCCGCAAGGAAAAGCCACATCAGCTCGATGACAGACTCGAGCAATTATT
TCTCGATAAATCGGTGACCTGCCGCAGCGCCTGGAACCGTTTGTTCGATGAGACCATCTCCGCCTTGCGGTTCAAGGTTG
ATGATCAGGAACTGACCTTGGAACTGGCCCTGAACCTGATGCAGGACGAGGACACGAAAGTCCGCGAAAAGGGTGCCAAC
GCGATTGCCGAAACCTTGAAGGCCAATCTGCGGACCTTCACGCTGATTTCGAATACACTCGCCAAGGATAAGGAAATTTC
CGACCGCTGGCGCGGCTTCCAGGATATTGCCGATTCCCGTCATCTGTCGAACCGGGTCGAGCGCGAGGTTGTGGATGCGC
TGGTGGCGGCGGTTCATGCCGCCTATCCACGTCTTTCGCATCGCTATTACAAGCTCAAGGCAAAATGGTTCGGACTGGAC
CAGTTGAATCATTGGGATCGCAACGCGCCTTTGCCCAATATCGCCGCCAAGACCTATCCTTGGGCCGAGGCGCGCGACAC
GGTGCTTGATGCTTATGGCGCTTTCTCTGCCGATATGGCGGGTATTGCCAAACGCTTCTTCGACAATGGCTGGATCGACG
CGCCGGCGCGTCCCGGCAAGGCTCCGGGTGCCTTCGCGCATCCGACCGTGCCTTCCGCGCATCCCTATGTCTTGCTGAAT
TATCTTGGCAAGCCGCGTGATGTCATGACACTTGCGCATGAACTTGGTCATGGTGTGCATCAAGTGCTTGCCGGGCCGAA
TGGGGCCTTGATGGCGCCGACGCCGTTGACGCTCGCCGAAACGGCTTCCGTCTTCGGCGAAATGCTGACCTTCCGCACTC
TCCTGGCCCGCACGACCAATGTGACCGAGCGCCGTGCCATGCTTGCGGCCAAGGTCGAGGATATGATCAATACGGTCGTG
CGGCAGATCGCTTTCTATACATTCGAGCGTAAACTGCATACAGCCCGTCGTGAAGGAGAACTAACCGCCGAACAGGTCTG
CGAACTCTGGATGAGTGTGCAGGCGGAAAGCCTTGGTCCCTCGATCAAGCTGGGGCCGGGTTATGAGACCTTCTGGGCCT
ATATTCCGCATTTCATTCATTCGCCTTTCTATGTCTATGCTTATGCCTTTGGCGATTGCCTGGTGAACTCTCTCTATGGC
GTCTATGAAAAATCCCGCGAGGGTTTTGCCGAACGTTATCTCGCCATGTTGTCGGCGGGTGGCACCAAGCATCATGCGGA
ATTGCTCGCGCCCTTTGGACTGGATGCGCGTGATCCCTCCTTCTGGCAGATTGGCCTTTCGATGATCGAGGGTATGATCG
GCGAACTGGAAAGCCTTGAGGGACAATAG

Upstream 100 bases:

>100_bases
GAGGGCCACGTCCTGGCTGGTCGAAAGGCGTCTTGATGGTTGATCCGCTGGGAAGCGATCCGATATGAAGGCATGACCAT
CCTTTTTCGAGGCGGCTTCC

Downstream 100 bases:

>100_bases
AGAGGGGCAATAGAGCATCGCTCGATCAATCGGGCGCATGAGCGATGCTCTGAGGTCTTCTCATCGCATCGAATTGATCC
CAAAAGGGATACAACTTTTC

Product: pepF/M3 family oligoendopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 622; Mature: 621

Protein sequence:

>622_residues
MSLIHSLLSRNFLDFPRDPAQAGQGAPAVALGTLPEWNLADLYPAPDSPLFARDLAHAVAEAKAFAEAYKGRLETLAMDP
SSTGLIEAVRRYETVEELLGRLMSYAGLHYYGDTSDAARAKFYGDTHEEITKASSDLLFFELELNRLDDALIEKALKGTP
LEHYRPWIEDIRKEKPHQLDDRLEQLFLDKSVTCRSAWNRLFDETISALRFKVDDQELTLELALNLMQDEDTKVREKGAN
AIAETLKANLRTFTLISNTLAKDKEISDRWRGFQDIADSRHLSNRVEREVVDALVAAVHAAYPRLSHRYYKLKAKWFGLD
QLNHWDRNAPLPNIAAKTYPWAEARDTVLDAYGAFSADMAGIAKRFFDNGWIDAPARPGKAPGAFAHPTVPSAHPYVLLN
YLGKPRDVMTLAHELGHGVHQVLAGPNGALMAPTPLTLAETASVFGEMLTFRTLLARTTNVTERRAMLAAKVEDMINTVV
RQIAFYTFERKLHTARREGELTAEQVCELWMSVQAESLGPSIKLGPGYETFWAYIPHFIHSPFYVYAYAFGDCLVNSLYG
VYEKSREGFAERYLAMLSAGGTKHHAELLAPFGLDARDPSFWQIGLSMIEGMIGELESLEGQ

Sequences:

>Translated_622_residues
MSLIHSLLSRNFLDFPRDPAQAGQGAPAVALGTLPEWNLADLYPAPDSPLFARDLAHAVAEAKAFAEAYKGRLETLAMDP
SSTGLIEAVRRYETVEELLGRLMSYAGLHYYGDTSDAARAKFYGDTHEEITKASSDLLFFELELNRLDDALIEKALKGTP
LEHYRPWIEDIRKEKPHQLDDRLEQLFLDKSVTCRSAWNRLFDETISALRFKVDDQELTLELALNLMQDEDTKVREKGAN
AIAETLKANLRTFTLISNTLAKDKEISDRWRGFQDIADSRHLSNRVEREVVDALVAAVHAAYPRLSHRYYKLKAKWFGLD
QLNHWDRNAPLPNIAAKTYPWAEARDTVLDAYGAFSADMAGIAKRFFDNGWIDAPARPGKAPGAFAHPTVPSAHPYVLLN
YLGKPRDVMTLAHELGHGVHQVLAGPNGALMAPTPLTLAETASVFGEMLTFRTLLARTTNVTERRAMLAAKVEDMINTVV
RQIAFYTFERKLHTARREGELTAEQVCELWMSVQAESLGPSIKLGPGYETFWAYIPHFIHSPFYVYAYAFGDCLVNSLYG
VYEKSREGFAERYLAMLSAGGTKHHAELLAPFGLDARDPSFWQIGLSMIEGMIGELESLEGQ
>Mature_621_residues
SLIHSLLSRNFLDFPRDPAQAGQGAPAVALGTLPEWNLADLYPAPDSPLFARDLAHAVAEAKAFAEAYKGRLETLAMDPS
STGLIEAVRRYETVEELLGRLMSYAGLHYYGDTSDAARAKFYGDTHEEITKASSDLLFFELELNRLDDALIEKALKGTPL
EHYRPWIEDIRKEKPHQLDDRLEQLFLDKSVTCRSAWNRLFDETISALRFKVDDQELTLELALNLMQDEDTKVREKGANA
IAETLKANLRTFTLISNTLAKDKEISDRWRGFQDIADSRHLSNRVEREVVDALVAAVHAAYPRLSHRYYKLKAKWFGLDQ
LNHWDRNAPLPNIAAKTYPWAEARDTVLDAYGAFSADMAGIAKRFFDNGWIDAPARPGKAPGAFAHPTVPSAHPYVLLNY
LGKPRDVMTLAHELGHGVHQVLAGPNGALMAPTPLTLAETASVFGEMLTFRTLLARTTNVTERRAMLAAKVEDMINTVVR
QIAFYTFERKLHTARREGELTAEQVCELWMSVQAESLGPSIKLGPGYETFWAYIPHFIHSPFYVYAYAFGDCLVNSLYGV
YEKSREGFAERYLAMLSAGGTKHHAELLAPFGLDARDPSFWQIGLSMIEGMIGELESLEGQ

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 69716; Mature: 69585

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLIHSLLSRNFLDFPRDPAQAGQGAPAVALGTLPEWNLADLYPAPDSPLFARDLAHAVA
CHHHHHHHHCCCCCCCCCHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH
EAKAFAEAYKGRLETLAMDPSSTGLIEAVRRYETVEELLGRLMSYAGLHYYGDTSDAARA
HHHHHHHHHHCHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHH
KFYGDTHEEITKASSDLLFFELELNRLDDALIEKALKGTPLEHYRPWIEDIRKEKPHQLD
HHCCCCHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHH
DRLEQLFLDKSVTCRSAWNRLFDETISALRFKVDDQELTLELALNLMQDEDTKVREKGAN
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCHHHHHHHHH
AIAETLKANLRTFTLISNTLAKDKEISDRWRGFQDIADSRHLSNRVEREVVDALVAAVHA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYPRLSHRYYKLKAKWFGLDQLNHWDRNAPLPNIAAKTYPWAEARDTVLDAYGAFSADMA
HHHHHHHHHEEEEHHEECCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHH
GIAKRFFDNGWIDAPARPGKAPGAFAHPTVPSAHPYVLLNYLGKPRDVMTLAHELGHGVH
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHH
QVLAGPNGALMAPTPLTLAETASVFGEMLTFRTLLARTTNVTERRAMLAAKVEDMINTVV
HHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
RQIAFYTFERKLHTARREGELTAEQVCELWMSVQAESLGPSIKLGPGYETFWAYIPHFIH
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHC
SPFYVYAYAFGDCLVNSLYGVYEKSREGFAERYLAMLSAGGTKHHAELLAPFGLDARDPS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCH
FWQIGLSMIEGMIGELESLEGQ
HHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SLIHSLLSRNFLDFPRDPAQAGQGAPAVALGTLPEWNLADLYPAPDSPLFARDLAHAVA
HHHHHHHHCCCCCCCCCHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHH
EAKAFAEAYKGRLETLAMDPSSTGLIEAVRRYETVEELLGRLMSYAGLHYYGDTSDAARA
HHHHHHHHHHCHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHH
KFYGDTHEEITKASSDLLFFELELNRLDDALIEKALKGTPLEHYRPWIEDIRKEKPHQLD
HHCCCCHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHH
DRLEQLFLDKSVTCRSAWNRLFDETISALRFKVDDQELTLELALNLMQDEDTKVREKGAN
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCHHHHHHHHH
AIAETLKANLRTFTLISNTLAKDKEISDRWRGFQDIADSRHLSNRVEREVVDALVAAVHA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYPRLSHRYYKLKAKWFGLDQLNHWDRNAPLPNIAAKTYPWAEARDTVLDAYGAFSADMA
HHHHHHHHHEEEEHHEECCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHH
GIAKRFFDNGWIDAPARPGKAPGAFAHPTVPSAHPYVLLNYLGKPRDVMTLAHELGHGVH
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHH
QVLAGPNGALMAPTPLTLAETASVFGEMLTFRTLLARTTNVTERRAMLAAKVEDMINTVV
HHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
RQIAFYTFERKLHTARREGELTAEQVCELWMSVQAESLGPSIKLGPGYETFWAYIPHFIH
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHC
SPFYVYAYAFGDCLVNSLYGVYEKSREGFAERYLAMLSAGGTKHHAELLAPFGLDARDPS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCH
FWQIGLSMIEGMIGELESLEGQ
HHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]