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The map label for this gene is yogA [H]

Identifier: 182677368

GI number: 182677368

Start: 427582

End: 428589

Strand: Direct

Name: yogA [H]

Synonym: Bind_0371

Alternate gene names: 182677368

Gene position: 427582-428589 (Clockwise)

Preceding gene: 182677367

Following gene: 182677369

Centisome position: 10.25

GC content: 60.22

Gene sequence:

>1008_bases
ATGCGTGCAGTCGTGGTTCGAACGCCGGGTGGTCTCGATCATCTGGCCCTTGTCGAACAGCCCGATCCCGGTGCACCGGG
GATCGGTGAAATTCGCGTGCGCCTGCACGCGAATTCACTGAACTATCATGATTATTGCGTTGCCATCGGGGTCATGCCGA
CGGAAGACGGGCGCATCCCCATGGCCGATGGGGCGGGTATCGTGGAAGCCGTGGGCGATGGCGTCGGGGAATTCGCGGTC
GGTGACTCAGTCGTGTCTTGCTTCTATCCGCTCTGGCAGGAAGGGGCGCCCGTGGCCAGCGGCTTTGCAACCGTGCCAGG
CGATGGTGTCGATGGTTATGCGCGCGAGAGTGTCGTGCGCCCGGCAAGCTGGTTTACCAAGGCCCCAAAAGGCTATAGCC
ATGCCGAGGCGGCGACGCTGACGACCGCCGGCTTGACCGCCTGGCGGGCCCTGGTCGGTGACGGAGGGTTGAAAGCTGGC
GATACCGTCCTGGCGCTTGGCACTGGCGGCGTTTCCATCTTTGGGCTGCAATTTGCCAAAATGATGGGCGCACGCGTGAT
CATCACTTCATCCTCTGATGAGAAATTGGAAAGGGCGCGCGCGCTCGGCGCCGACGAAACGATCAATTACAAACAGGAAC
TCAATTGGGGTGAGAAAGTCTTCGCCTTGACGGGTGGCCGTGGTGTCGATCACGTGCTCGAAGTCGGTGGTCCCGGCACT
TTGCCGCAATCGATCGCGGCGGTGCGGATCGGTGGCCATATTGCCATGATCGGTATTCTCACGGGCTTTAGCGGCGAAGT
ACCGACGCTGGCGCTTCTTGGCAAACAGGCGCGGCTCCAGGGTTTGATCGTCGGCAGCCGGCGTCAACAGATCGAGATGA
TCCGCGCCATCGAGGAGAATGGCCTGAAACCGGTGATCGACAAGAGTTTCGCCCTGGCTGATATGGCTCAATCGTTCCTG
TATGAGGAATCCGGCCAGCACTTTGGCAAGATTGTTTTGGAGTTTTAG

Upstream 100 bases:

>100_bases
CTCATCGCATCGAATTGATCCCAAAAGGGATACAACTTTTCGGTGTGATGCTGTAGGCGGACTGCGGATCGTTCAGACGC
AGACAGAATGAGGAGAATGC

Downstream 100 bases:

>100_bases
CCTCCTTTGATGAAGCGCGGGCTCATTCAGAAAGAGCCGTTGCCGCCGCGTTTTGCCGCCTGGTTCGCGGCGCGCGGCTG
GAGCCCGCGGGCACATCAGC

Product: alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MRAVVVRTPGGLDHLALVEQPDPGAPGIGEIRVRLHANSLNYHDYCVAIGVMPTEDGRIPMADGAGIVEAVGDGVGEFAV
GDSVVSCFYPLWQEGAPVASGFATVPGDGVDGYARESVVRPASWFTKAPKGYSHAEAATLTTAGLTAWRALVGDGGLKAG
DTVLALGTGGVSIFGLQFAKMMGARVIITSSSDEKLERARALGADETINYKQELNWGEKVFALTGGRGVDHVLEVGGPGT
LPQSIAAVRIGGHIAMIGILTGFSGEVPTLALLGKQARLQGLIVGSRRQQIEMIRAIEENGLKPVIDKSFALADMAQSFL
YEESGQHFGKIVLEF

Sequences:

>Translated_335_residues
MRAVVVRTPGGLDHLALVEQPDPGAPGIGEIRVRLHANSLNYHDYCVAIGVMPTEDGRIPMADGAGIVEAVGDGVGEFAV
GDSVVSCFYPLWQEGAPVASGFATVPGDGVDGYARESVVRPASWFTKAPKGYSHAEAATLTTAGLTAWRALVGDGGLKAG
DTVLALGTGGVSIFGLQFAKMMGARVIITSSSDEKLERARALGADETINYKQELNWGEKVFALTGGRGVDHVLEVGGPGT
LPQSIAAVRIGGHIAMIGILTGFSGEVPTLALLGKQARLQGLIVGSRRQQIEMIRAIEENGLKPVIDKSFALADMAQSFL
YEESGQHFGKIVLEF
>Mature_335_residues
MRAVVVRTPGGLDHLALVEQPDPGAPGIGEIRVRLHANSLNYHDYCVAIGVMPTEDGRIPMADGAGIVEAVGDGVGEFAV
GDSVVSCFYPLWQEGAPVASGFATVPGDGVDGYARESVVRPASWFTKAPKGYSHAEAATLTTAGLTAWRALVGDGGLKAG
DTVLALGTGGVSIFGLQFAKMMGARVIITSSSDEKLERARALGADETINYKQELNWGEKVFALTGGRGVDHVLEVGGPGT
LPQSIAAVRIGGHIAMIGILTGFSGEVPTLALLGKQARLQGLIVGSRRQQIEMIRAIEENGLKPVIDKSFALADMAQSFL
YEESGQHFGKIVLEF

Specific function: Not Known; Probable Catabolic Enzyme. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

Organism=Homo sapiens, GI22538446, Length=353, Percent_Identity=28.0453257790368, Blast_Score=105, Evalue=8e-23,
Organism=Homo sapiens, GI22538444, Length=353, Percent_Identity=28.0453257790368, Blast_Score=105, Evalue=8e-23,
Organism=Homo sapiens, GI194239674, Length=327, Percent_Identity=25.0764525993884, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI13236495, Length=327, Percent_Identity=25.0764525993884, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI47519420, Length=348, Percent_Identity=26.4367816091954, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI28557745, Length=245, Percent_Identity=30.6122448979592, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI194239676, Length=231, Percent_Identity=27.7056277056277, Blast_Score=69, Evalue=6e-12,
Organism=Escherichia coli, GI1787863, Length=348, Percent_Identity=26.7241379310345, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI87081918, Length=344, Percent_Identity=28.7790697674419, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1790045, Length=291, Percent_Identity=28.5223367697594, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1790485, Length=244, Percent_Identity=27.4590163934426, Blast_Score=62, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17562876, Length=331, Percent_Identity=27.190332326284, Blast_Score=71, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17507255, Length=326, Percent_Identity=26.3803680981595, Blast_Score=70, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6319520, Length=346, Percent_Identity=27.4566473988439, Blast_Score=80, Evalue=5e-16,
Organism=Saccharomyces cerevisiae, GI6319955, Length=298, Percent_Identity=26.1744966442953, Blast_Score=74, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6322619, Length=300, Percent_Identity=26.3333333333333, Blast_Score=74, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6323729, Length=347, Percent_Identity=23.9193083573487, Blast_Score=64, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6323961, Length=346, Percent_Identity=23.6994219653179, Blast_Score=63, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: 1.1.1.- [C]

Molecular weight: Translated: 35098; Mature: 35098

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAVVVRTPGGLDHLALVEQPDPGAPGIGEIRVRLHANSLNYHDYCVAIGVMPTEDGRIP
CCEEEEECCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCEEEEEEEEEECCCCCEE
MADGAGIVEAVGDGVGEFAVGDSVVSCFYPLWQEGAPVASGFATVPGDGVDGYARESVVR
CCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCHHHHHHCC
PASWFTKAPKGYSHAEAATLTTAGLTAWRALVGDGGLKAGDTVLALGTGGVSIFGLQFAK
CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEHHHHHHHH
MMGARVIITSSSDEKLERARALGADETINYKQELNWGEKVFALTGGRGVDHVLEVGGPGT
HCCCEEEEECCCHHHHHHHHHCCCCCCCCHHHHCCCCCEEEEEECCCCCHHHEECCCCCC
LPQSIAAVRIGGHIAMIGILTGFSGEVPTLALLGKQARLQGLIVGSRRQQIEMIRAIEEN
CCHHHEEEEECCEEEEEEEEECCCCCCCCHHHHCCHHHEEEEEECCHHHHHHHHHHHHHC
GLKPVIDKSFALADMAQSFLYEESGQHFGKIVLEF
CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC
>Mature Secondary Structure
MRAVVVRTPGGLDHLALVEQPDPGAPGIGEIRVRLHANSLNYHDYCVAIGVMPTEDGRIP
CCEEEEECCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCEEEEEEEEEECCCCCEE
MADGAGIVEAVGDGVGEFAVGDSVVSCFYPLWQEGAPVASGFATVPGDGVDGYARESVVR
CCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCHHHHHHCC
PASWFTKAPKGYSHAEAATLTTAGLTAWRALVGDGGLKAGDTVLALGTGGVSIFGLQFAK
CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEHHHHHHHH
MMGARVIITSSSDEKLERARALGADETINYKQELNWGEKVFALTGGRGVDHVLEVGGPGT
HCCCEEEEECCCHHHHHHHHHCCCCCCCCHHHHCCCCCEEEEEECCCCCHHHEECCCCCC
LPQSIAAVRIGGHIAMIGILTGFSGEVPTLALLGKQARLQGLIVGSRRQQIEMIRAIEEN
CCHHHEEEEECCEEEEEEEEECCCCCCCCHHHHCCHHHEEEEEECCHHHHHHHHHHHHHC
GLKPVIDKSFALADMAQSFLYEESGQHFGKIVLEF
CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]