Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
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Accession | NC_010581 |
Length | 4,170,153 |
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The map label for this gene is 182677258
Identifier: 182677258
GI number: 182677258
Start: 297400
End: 298527
Strand: Direct
Name: 182677258
Synonym: Bind_0259
Alternate gene names: NA
Gene position: 297400-298527 (Clockwise)
Preceding gene: 182677257
Following gene: 182677261
Centisome position: 7.13
GC content: 59.75
Gene sequence:
>1128_bases ATGAGATCGATTTTGAAAATCACGGGATCGTCCCTGGCCGCGCTTGCAGCCATTTTCTCACTCTCATCGGCGGCTGTCGC CCAGAGCTTGCAGGAAAGAGCGCACGGCACCCTTTATACGATGAGCAATGCGGTCAATGGCAATGCCATATTGGCTTTTC GCCAGACGGAAACAGGCGAGCTTTCTCCCGCGGGCTCATTTCCGACCGGTGGCCTCGGCACGGGTGGCGGCCTTGGCAAT GCCGGCGGGCTTGTCTTGAGCCAGGACCAGCATTGGCTCTTTGCCGTCAATGCCGGCAGCAATGAAATTTCGGTTTTTGC GATAGACGATGAGGGCCGCCTGAGACTGGCTTCGAAAACAGCCAGCGGCGGTGGGCAGCCCGTCAGCATCGCCGTCGATG ATGATCTCGTCTATGTGCTGAATGCGAATAGCGATCTCATCAATGGATTCAGGCTTAAGCGGGACGGTCGTCTCGAACAG ATCCCAGGTTCCCTGCGCGCATTGGGCGGAACCGGCACCAATCCCGCCGAGATTGCCTTTAGCCCCGATGGCCAGAGCCT TATCATCAGCGAAAAGGCCACGAATCGACTCGCTGTCTTCAAAGTCGATCGCGCGGGCCTGACCGATAATGCGCCTGGGC TCGTGCCCTCGGCGGGGCTCACGCCCTTTGGCTTTGCCTTCAGCCACCGCAAAACGCTGTTGGTTACAGAGGCAGGTGGC GGCACCAATGGCAGCACTCTTTCTTCCTATCATCTCCGTCGCGATGAGTTGCCTGTTCTGGTCGATGGCGCGGTTCGAAC GACACAGAGCGCGGCCTGCTGGGTGGCCGTGACACCCGACGGGCGATATGCCTATACGAGCAATGCCGCGAGCCAGTCGA TTACCGGTTTTCGGGTCGCGCCCTCAGGCGATCTGACCCTGCTCGATGCGGATGGAGTAACGGCCAGCACTGCGGGCAAT GGTAATCCGATCGACAGCGTGATTAGCCGCGACGGGCAGTTTCTTTATGTGTTGAGCGCCGGCAAGGACACGATCGGCGC CTTCAAGATCGGCCATGACGGTGGCCTCACGCCGATCGCTGCTTTGCAAGGGCTTCCGGCGAGCGCCAATGGACTGGCCA TCCGTTGA
Upstream 100 bases:
>100_bases AAAGAAAATTTTCGCGCGGGCCTTTGTAATAGTTTCGGCCGGCCGAACGAAAGATCTCATGTGGCCAAGTTGAAGCCATA TCCGCTGAGAAGGATTCAGC
Downstream 100 bases:
>100_bases GACGATCGTTGCGATGAACTGCGGAAGCGGCGCTTTGAACGAGAAAGGCTCTCGCTCTTCATGCGCGCGCTTCTTCCGCC TGAGCCTTGCTGCGTGCGGA
Product: putative 3-carboxymuconate cyclase
Products: NA
Alternate protein names: Hemagglutinin-Related Protein; 40-Residue YVTN Family Beta-Propeller Repeat Protein
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MRSILKITGSSLAALAAIFSLSSAAVAQSLQERAHGTLYTMSNAVNGNAILAFRQTETGELSPAGSFPTGGLGTGGGLGN AGGLVLSQDQHWLFAVNAGSNEISVFAIDDEGRLRLASKTASGGGQPVSIAVDDDLVYVLNANSDLINGFRLKRDGRLEQ IPGSLRALGGTGTNPAEIAFSPDGQSLIISEKATNRLAVFKVDRAGLTDNAPGLVPSAGLTPFGFAFSHRKTLLVTEAGG GTNGSTLSSYHLRRDELPVLVDGAVRTTQSAACWVAVTPDGRYAYTSNAASQSITGFRVAPSGDLTLLDADGVTASTAGN GNPIDSVISRDGQFLYVLSAGKDTIGAFKIGHDGGLTPIAALQGLPASANGLAIR
Sequences:
>Translated_375_residues MRSILKITGSSLAALAAIFSLSSAAVAQSLQERAHGTLYTMSNAVNGNAILAFRQTETGELSPAGSFPTGGLGTGGGLGN AGGLVLSQDQHWLFAVNAGSNEISVFAIDDEGRLRLASKTASGGGQPVSIAVDDDLVYVLNANSDLINGFRLKRDGRLEQ IPGSLRALGGTGTNPAEIAFSPDGQSLIISEKATNRLAVFKVDRAGLTDNAPGLVPSAGLTPFGFAFSHRKTLLVTEAGG GTNGSTLSSYHLRRDELPVLVDGAVRTTQSAACWVAVTPDGRYAYTSNAASQSITGFRVAPSGDLTLLDADGVTASTAGN GNPIDSVISRDGQFLYVLSAGKDTIGAFKIGHDGGLTPIAALQGLPASANGLAIR >Mature_375_residues MRSILKITGSSLAALAAIFSLSSAAVAQSLQERAHGTLYTMSNAVNGNAILAFRQTETGELSPAGSFPTGGLGTGGGLGN AGGLVLSQDQHWLFAVNAGSNEISVFAIDDEGRLRLASKTASGGGQPVSIAVDDDLVYVLNANSDLINGFRLKRDGRLEQ IPGSLRALGGTGTNPAEIAFSPDGQSLIISEKATNRLAVFKVDRAGLTDNAPGLVPSAGLTPFGFAFSHRKTLLVTEAGG GTNGSTLSSYHLRRDELPVLVDGAVRTTQSAACWVAVTPDGRYAYTSNAASQSITGFRVAPSGDLTLLDADGVTASTAGN GNPIDSVISRDGQFLYVLSAGKDTIGAFKIGHDGGLTPIAALQGLPASANGLAIR
Specific function: Unknown
COG id: COG2706
COG function: function code G; 3-carboxymuconate cyclase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38272; Mature: 38272
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSILKITGSSLAALAAIFSLSSAAVAQSLQERAHGTLYTMSNAVNGNAILAFRQTETGE CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEECCCCCC LSPAGSFPTGGLGTGGGLGNAGGLVLSQDQHWLFAVNAGSNEISVFAIDDEGRLRLASKT CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCEEEEEEECCCCCEEEEEEC ASGGGQPVSIAVDDDLVYVLNANSDLINGFRLKRDGRLEQIPGSLRALGGTGTNPAEIAF CCCCCCEEEEEECCCEEEEEECCCCCCCCEEECCCCCHHHCCCCCEECCCCCCCCEEEEE SPDGQSLIISEKATNRLAVFKVDRAGLTDNAPGLVPSAGLTPFGFAFSHRKTLLVTEAGG CCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCC GTNGSTLSSYHLRRDELPVLVDGAVRTTQSAACWVAVTPDGRYAYTSNAASQSITGFRVA CCCCCCEEEEEECCCCCCEEEECCEECCCCCEEEEEECCCCCEEEECCCCCCCCCEEEEC PSGDLTLLDADGVTASTAGNGNPIDSVISRDGQFLYVLSAGKDTIGAFKIGHDGGLTPIA CCCCEEEEECCCCEEECCCCCCCHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCHHH ALQGLPASANGLAIR HHCCCCCCCCCCEEC >Mature Secondary Structure MRSILKITGSSLAALAAIFSLSSAAVAQSLQERAHGTLYTMSNAVNGNAILAFRQTETGE CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEEECCCCCC LSPAGSFPTGGLGTGGGLGNAGGLVLSQDQHWLFAVNAGSNEISVFAIDDEGRLRLASKT CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCEEEEEEECCCCCEEEEEEC ASGGGQPVSIAVDDDLVYVLNANSDLINGFRLKRDGRLEQIPGSLRALGGTGTNPAEIAF CCCCCCEEEEEECCCEEEEEECCCCCCCCEEECCCCCHHHCCCCCEECCCCCCCCEEEEE SPDGQSLIISEKATNRLAVFKVDRAGLTDNAPGLVPSAGLTPFGFAFSHRKTLLVTEAGG CCCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCC GTNGSTLSSYHLRRDELPVLVDGAVRTTQSAACWVAVTPDGRYAYTSNAASQSITGFRVA CCCCCCEEEEEECCCCCCEEEECCEECCCCCEEEEEECCCCCEEEECCCCCCCCCEEEEC PSGDLTLLDADGVTASTAGNGNPIDSVISRDGQFLYVLSAGKDTIGAFKIGHDGGLTPIA CCCCEEEEECCCCEEECCCCCCCHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCHHH ALQGLPASANGLAIR HHCCCCCCCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA