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The map label for this gene is hslV [H]

Identifier: 182677249

GI number: 182677249

Start: 287367

End: 287960

Strand: Direct

Name: hslV [H]

Synonym: Bind_0250

Alternate gene names: 182677249

Gene position: 287367-287960 (Clockwise)

Preceding gene: 182677243

Following gene: 182677250

Centisome position: 6.89

GC content: 60.27

Gene sequence:

>594_bases
ATGCGCGATTACCCGTCCTTTCCGGCTTTTTCCCAGGCTTCTTCGCCCGAAAGCTGGCACGGCACGACCATTTTGATGGT
CAAGAAAGGCGGCCGAACGGTGATCGGCGGTGATGGTCAGGTGACGCTTGGCCAGACGATCGTCAAGGGGAATGCCCGCA
AGGTCCGTCGGCTCTCCAAGGGCGATGTCATCGGCGGTTTCGCCGGTGCGACCGCGGATGCCTTCACTTTGTTCGAGCGG
CTCGAGGCCAAGCTCGAACAATATCCCGGACAATTGATGCGCGCCTGCGTCGAACTCGCCAAGGATTGGCGGACAGATCG
CTATTTGCGCCGGCTTGAGGCAATGATGCTCGTCGCCGACAAACAGGCGGGGCTGGTCTTGACCGGCACCGGCGATGTGC
TCGAACCCGAGATGACCGAGCAAGGGAGTGTCATGGGCATTGGCTCCGGCGGCAATTATGCGCTGGCGGCCGGCCGCGCC
CTGCTCGCCACGGAATTCGACGCCGAGACCATTACGCGCAAGTCGCTCGAAATTGCCGCCGATATTTGCGTCTACACCAA
TCGCAATCTCATTATCGAATCGATTGATGCCTGA

Upstream 100 bases:

>100_bases
AAAACTTGTCCACGGCCATAGGCCTTGCATCACCCGTGGCCTCCCCATAGATGAAAGATCTGCTCTTCGTGGAGAAGAGG
CGGCGTTTCCTGGAGTTTCG

Downstream 100 bases:

>100_bases
GCCTGCAAGGGTTTGGGCTTTCTTCTCCTCATTTTTTACGCGATGCCTTCATGACCGATTTTTCACCCCGTGAAATCGTT
TCCGAGCTGGACCGCTATAT

Product: ATP-dependent protease peptidase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MRDYPSFPAFSQASSPESWHGTTILMVKKGGRTVIGGDGQVTLGQTIVKGNARKVRRLSKGDVIGGFAGATADAFTLFER
LEAKLEQYPGQLMRACVELAKDWRTDRYLRRLEAMMLVADKQAGLVLTGTGDVLEPEMTEQGSVMGIGSGGNYALAAGRA
LLATEFDAETITRKSLEIAADICVYTNRNLIIESIDA

Sequences:

>Translated_197_residues
MRDYPSFPAFSQASSPESWHGTTILMVKKGGRTVIGGDGQVTLGQTIVKGNARKVRRLSKGDVIGGFAGATADAFTLFER
LEAKLEQYPGQLMRACVELAKDWRTDRYLRRLEAMMLVADKQAGLVLTGTGDVLEPEMTEQGSVMGIGSGGNYALAAGRA
LLATEFDAETITRKSLEIAADICVYTNRNLIIESIDA
>Mature_197_residues
MRDYPSFPAFSQASSPESWHGTTILMVKKGGRTVIGGDGQVTLGQTIVKGNARKVRRLSKGDVIGGFAGATADAFTLFER
LEAKLEQYPGQLMRACVELAKDWRTDRYLRRLEAMMLVADKQAGLVLTGTGDVLEPEMTEQGSVMGIGSGGNYALAAGRA
LLATEFDAETITRKSLEIAADICVYTNRNLIIESIDA

Specific function: Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery [H]

COG id: COG5405

COG function: function code O; ATP-dependent protease HslVU (ClpYQ), peptidase subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase T1B family. HslV subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790367, Length=175, Percent_Identity=58.2857142857143, Blast_Score=201, Evalue=3e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022281
- InterPro:   IPR001353 [H]

Pfam domain/function: PF00227 Proteasome [H]

EC number: 3.4.25.-

Molecular weight: Translated: 21266; Mature: 21266

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDYPSFPAFSQASSPESWHGTTILMVKKGGRTVIGGDGQVTLGQTIVKGNARKVRRLSK
CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEECCCCCEEECCEEECCCHHHHHHHCC
GDVIGGFAGATADAFTLFERLEAKLEQYPGQLMRACVELAKDWRTDRYLRRLEAMMLVAD
CCEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEC
KQAGLVLTGTGDVLEPEMTEQGSVMGIGSGGNYALAAGRALLATEFDAETITRKSLEIAA
CCCCEEEECCCCCCCCCCCCCCCEEEECCCCCEEEECCCEEEEECCCHHHHHHHHHHHHE
DICVYTNRNLIIESIDA
EEEEEECCCEEEEECCC
>Mature Secondary Structure
MRDYPSFPAFSQASSPESWHGTTILMVKKGGRTVIGGDGQVTLGQTIVKGNARKVRRLSK
CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEECCCCCEEECCEEECCCHHHHHHHCC
GDVIGGFAGATADAFTLFERLEAKLEQYPGQLMRACVELAKDWRTDRYLRRLEAMMLVAD
CCEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEC
KQAGLVLTGTGDVLEPEMTEQGSVMGIGSGGNYALAAGRALLATEFDAETITRKSLEIAA
CCCCEEEECCCCCCCCCCCCCCCEEEECCCCCEEEECCCEEEEECCCHHHHHHHHHHHHE
DICVYTNRNLIIESIDA
EEEEEECCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA