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The map label for this gene is nusB [H]

Identifier: 182677206

GI number: 182677206

Start: 244317

End: 244784

Strand: Direct

Name: nusB [H]

Synonym: Bind_0207

Alternate gene names: 182677206

Gene position: 244317-244784 (Clockwise)

Preceding gene: 182677205

Following gene: 182677207

Centisome position: 5.86

GC content: 59.4

Gene sequence:

>468_bases
ATGGCTAATGCCGAACAGCGCTCCGCCGCTCGCCTTGCCGCGGTCCAGGCGCTCTACCAGATGGAAGTCACCGAGAAGGG
GCTGAACGAGACCTTGGCTGAATTCGAATCCTTCTGGATCGGGAATGAGATCGAGGGGGATCAATATAAGGAAGCGGAAA
TCGCCTTTTTCCGCGATATTCTGGGTGGCGTGCTCGCCGATCAAGAGCCGATCGACCGCCAGCTCGACAAAACCTTGGTC
GATGGCTGGCCGCTGCGCCGTGTCGATCCGGTCGTGCGCGCCATTTTGCGGGCCGGGGCCTATGAATTGAAGAAACGCAC
CGATATTCCGGCCCGCGTCTCGATCAAGGAATATGTCGATGTCGCCGGTGCCTTTTTCGGCCGCGAGGAATCGGGCATGA
TCAATGCTGTGCTCGACGAATTGGCCCGCCGTTATCGCGCCGACGAATTCGCCGCCTCGCGTCTTTAG

Upstream 100 bases:

>100_bases
TTCGGTCAAGTCGTCGAGCAAGCCCAGATTCAAGCTCAGCGCCCGGTCCTGACCTCGGGAGCGCGCTAATGGCCCCGATC
CCACCCTTGGGAGGGTTGTA

Downstream 100 bases:

>100_bases
AATACAGACTGTCATGCCACGCTTATCCGAGGACGAGCTGATCGCGACTTATTTCGCGCCGCTCGCGGGCCCCGCCGGCC
TGAACCTGCGCGATGATGCG

Product: NusB antitermination factor

Products: NA

Alternate protein names: Protein nusB [H]

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MANAEQRSAARLAAVQALYQMEVTEKGLNETLAEFESFWIGNEIEGDQYKEAEIAFFRDILGGVLADQEPIDRQLDKTLV
DGWPLRRVDPVVRAILRAGAYELKKRTDIPARVSIKEYVDVAGAFFGREESGMINAVLDELARRYRADEFAASRL

Sequences:

>Translated_155_residues
MANAEQRSAARLAAVQALYQMEVTEKGLNETLAEFESFWIGNEIEGDQYKEAEIAFFRDILGGVLADQEPIDRQLDKTLV
DGWPLRRVDPVVRAILRAGAYELKKRTDIPARVSIKEYVDVAGAFFGREESGMINAVLDELARRYRADEFAASRL
>Mature_154_residues
ANAEQRSAARLAAVQALYQMEVTEKGLNETLAEFESFWIGNEIEGDQYKEAEIAFFRDILGGVLADQEPIDRQLDKTLVD
GWPLRRVDPVVRAILRAGAYELKKRTDIPARVSIKEYVDVAGAFFGREESGMINAVLDELARRYRADEFAASRL

Specific function: Involved in the transcription termination process [H]

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusB family [H]

Homologues:

Organism=Escherichia coli, GI1786618, Length=137, Percent_Identity=27.7372262773723, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: 900 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011605
- InterPro:   IPR006027 [H]

Pfam domain/function: PF01029 NusB [H]

EC number: NA

Molecular weight: Translated: 17484; Mature: 17353

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS00698 GLYCOSYL_HYDROL_F9_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANAEQRSAARLAAVQALYQMEVTEKGLNETLAEFESFWIGNEIEGDQYKEAEIAFFRDI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
LGGVLADQEPIDRQLDKTLVDGWPLRRVDPVVRAILRAGAYELKKRTDIPARVSIKEYVD
HHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
VAGAFFGREESGMINAVLDELARRYRADEFAASRL
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ANAEQRSAARLAAVQALYQMEVTEKGLNETLAEFESFWIGNEIEGDQYKEAEIAFFRDI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
LGGVLADQEPIDRQLDKTLVDGWPLRRVDPVVRAILRAGAYELKKRTDIPARVSIKEYVD
HHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
VAGAFFGREESGMINAVLDELARRYRADEFAASRL
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA