| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is ppc [H]
Identifier: 182677139
GI number: 182677139
Start: 164257
End: 167055
Strand: Direct
Name: ppc [H]
Synonym: Bind_0138
Alternate gene names: 182677139
Gene position: 164257-167055 (Clockwise)
Preceding gene: 182677137
Following gene: 182677140
Centisome position: 3.94
GC content: 61.09
Gene sequence:
>2799_bases ATGACGACCAAAGGCGCGAGGACCGACATCATGACGAATCTGGCACGTCAGGCCGATGATCGGCTGAACGAGGAAATCCG CTTGCTCGGCCAGATCCTCGGCGAAACCATTCGCGAGCAGGAAGGCGACGAAAGTTTCGACCGGATCGAGACGATCCGCC GGTTGAGCGTCGCTTTTGAGCGCGGCGCCGATGCGGCGGCTGGTGAAACGCTCGATACTCTGCTGCGCGGCCTTTCCGCT GAACAGGCCGTCTCGGTGATCCGTTCCTTCAGTTATTTTTCGCATCTGGCTAATATTGCCGAGGATCATGAGACGATCCG CCGGTCCATCGCCGAAACCGGAACCGAAGAACCGGCCGGGCAAGAGACCGACTCCGCGGACGATGATTTCGATGGCGGCA TGGCTCGACTCACCGCGGCCGGCGTCGATAAGGCGCGGATCATCGAGGCCTTGCGACAGAGCTTTCTCTCCCCTGTCCTC ACCGCGCATCCAACGGAGGTGCAGCGCAAAAGCCAGCTTGACGCCGAACATGCGATCTTTTCCCTGCTGGTCGAACGCGA GCATCTGGGACCAGGCGCGGCCCGCCGCCGCAACGATGCGCTGCTGGCCGCCTGCATCACGCAAGCCTGGCAGACCCGGC TTCTGCGCAACGCCAAGCTCACCGTGCGCGATGAAATCGAAAACGCGCTCAGTTATTATCAGACGACCTTCTTGCGGCAG CTTCCGGCGCTTTACGCGGAACTCGAGGAATGGCTGGGCGTGCGCGATCTGCCCTGTTTCCTGCGCATGGGAAGCTGGAT CGGCGGGGATCGCGATGGCAATCCCAATGTCAATGCCGAGACGCTGGACATTGCCCTGCGGCGTCAGGCGGAAGTGGCCC TCCGCCATTATCTCTCCGAGGTGCGCGCGCTCGGCAACGAATTATCGCTCTCGCGCCTGCTCGTCGGCTGCTCGCAGGAT CTTCTGAGGCTTGCCGAGACATCGGGCGATGACAGCCCGCATCGCGCCGATGAGCCTTATCGCCGTGCCCTCATTGCCAT CAAGGGGCGGCTCGCCGCGACCTTGAAGGAACTGACAGGGCAGGAGGATAGCAAGCCGGCCCCGCTCGGCACGCAAGCCT ATCCCGATGCCTCGGCCCTGCTGGCCGATCTGGCGATCATCGAAAAATCTTTGGCGGAAAACCACGGAAGGGCTCTGATC GGCCCGCGGCTCGCGCCGTTTCAGCGTGCGGTCAAAGTTTTTGGCTTTCACTTGGCGACCGTCGATCTGCGCCAAAGTTC GGATCGTCATGCCGAGACGATCGGTGAATTGCTGCGTGTCGCCAAGGTTGTCGAGGATTATGATGCGCTCGATGAGAAGG CGCGCCAGGATTTGCTGATGCGGCTTCTGCAAGATCCGCGTCTCCTGCATGTGCCCTATCTGCGTTATAGCGCCCGCACC GAAGAGGAATTGGCGGTCTTCGAGACAGCGCGGCGGCTGCGCCGTTCGCACGGGCCGCTCGCCATCCGTCAATATATCAT CAGCCATACCGAAACGGTCAGCGATCTGCTCGAAGTGCTTCTCCTGCAGAAGGAATGCGGCCTGATTGAAGGCCTGATCG GCGATCCTGAACAAAAGCCCCGCGCTGAACTGATGGTCGTGCCTTTGTTCGAAACCATCGAGGATCTGCGCAATGCGCAG GGCATTATGGCCGATTTCTTCGCATTGCCGGGCATGGCGGATCTGGTGCGCGCCTCGGGCGGCGTGCAGGAGATCATGCT GGGCTATTCCGACAGCAATAAAGACGGCGGCTTCTTCACCAGCAATTGGGAACTCTACCGGGTTTCCATTGCCCTCGCCG GTTTCTTCGCGGCGCAGGAAGGCATCGTCCTCCGCCTCTTTCATGGACGTGGCGGCACAATCGGGCGCGGCGGTGGCCCA AGCCATCAGGCGATCCTGGCGCAGCCGCCGGGGACGGCCAATGGCCTGATCCGCCTGACTGAACAGGGCGAGGTCATTTC CTCGAAATATGCGCAGCCGGAGATCGGGCGGCGTAATCTCGAAACTCTGGTCGCGGCCAATATCGAGGCGACCCTGCTCG GGGGCGACGAGGCGCCGCCGGAAGCTTTTCTCGAAGCCGCGCATTTCCTGTCGGAGGCGAGCACCAAGGCCTATCGCGGC CTTGTCTATGATCTGCCGGGTTTCGTCGATTATTTCTATGCGGCGACGCCGATCGCCGAAATTGCCGATCTCAACATCGG CTCGCGCCCGGCTTCACGCAAATCGAGCCGCAAGATCGAAGATTTGCGCGCTATTCCCTGGAGCTTTTCCTGGGGTCAGG CGCGGGTCAGCCTGCCTGGCTGGTTCGGTTTCGGCACGGCGGTCGAGGCCTTTCTAAACGACGCGCCAGAAGAAAAATTG GCTTTGCTCCAGCGCATGGCACGGGAATGGCCGTTCTTCCACGCGCTTCTTTCCAATATGGACATGGTTCTGGCCAAGGC GGATCGCAAACTCGCCCGCCGCTACGCCGCCCTGGTGCCGGACCAGGCTTTGGCCGAACGGATTTTCGGGATCATTGATA CAGAATGGACGCGCACGCTTCACGCGCTCGACGAGATCACGGGTGTGCATGAGCGGCTGGCCGATAATCCAGCCTTGGCG CATTCGATCAGCAGGCGGTTTCCCTATATCGCGCCTTTGAACCATCTGCAGGTCGAATTGCTGCGCCGCTGGAGGCTCGG CAAGACGGATGCGCGGACCTATAACGGTATTTTGATTTCGATCAATGGCATAGCGGCGGGTCTGCGCAATTCTGGATGA
Upstream 100 bases:
>100_bases GGTTGAACACTTGGTTGAAGACTCGTGCGACAAAGCCTTGAGCCGGCCTCGCACTCTGTGGCATGACGCAGCGCATGATC GGGTCCAGGGGAGGAATCCG
Downstream 100 bases:
>100_bases TTTTCGCCGCATACATGAAACACACCGATTACGCGCAATTCTAATGAGATTCCTGACAAGGACTTAAACAAAGAATGGTT TCCTGAAAGCGGAATGAGCC
Product: phosphoenolpyruvate carboxylase
Products: NA
Alternate protein names: PEPC; PEPCase [H]
Number of amino acids: Translated: 932; Mature: 931
Protein sequence:
>932_residues MTTKGARTDIMTNLARQADDRLNEEIRLLGQILGETIREQEGDESFDRIETIRRLSVAFERGADAAAGETLDTLLRGLSA EQAVSVIRSFSYFSHLANIAEDHETIRRSIAETGTEEPAGQETDSADDDFDGGMARLTAAGVDKARIIEALRQSFLSPVL TAHPTEVQRKSQLDAEHAIFSLLVEREHLGPGAARRRNDALLAACITQAWQTRLLRNAKLTVRDEIENALSYYQTTFLRQ LPALYAELEEWLGVRDLPCFLRMGSWIGGDRDGNPNVNAETLDIALRRQAEVALRHYLSEVRALGNELSLSRLLVGCSQD LLRLAETSGDDSPHRADEPYRRALIAIKGRLAATLKELTGQEDSKPAPLGTQAYPDASALLADLAIIEKSLAENHGRALI GPRLAPFQRAVKVFGFHLATVDLRQSSDRHAETIGELLRVAKVVEDYDALDEKARQDLLMRLLQDPRLLHVPYLRYSART EEELAVFETARRLRRSHGPLAIRQYIISHTETVSDLLEVLLLQKECGLIEGLIGDPEQKPRAELMVVPLFETIEDLRNAQ GIMADFFALPGMADLVRASGGVQEIMLGYSDSNKDGGFFTSNWELYRVSIALAGFFAAQEGIVLRLFHGRGGTIGRGGGP SHQAILAQPPGTANGLIRLTEQGEVISSKYAQPEIGRRNLETLVAANIEATLLGGDEAPPEAFLEAAHFLSEASTKAYRG LVYDLPGFVDYFYAATPIAEIADLNIGSRPASRKSSRKIEDLRAIPWSFSWGQARVSLPGWFGFGTAVEAFLNDAPEEKL ALLQRMAREWPFFHALLSNMDMVLAKADRKLARRYAALVPDQALAERIFGIIDTEWTRTLHALDEITGVHERLADNPALA HSISRRFPYIAPLNHLQVELLRRWRLGKTDARTYNGILISINGIAAGLRNSG
Sequences:
>Translated_932_residues MTTKGARTDIMTNLARQADDRLNEEIRLLGQILGETIREQEGDESFDRIETIRRLSVAFERGADAAAGETLDTLLRGLSA EQAVSVIRSFSYFSHLANIAEDHETIRRSIAETGTEEPAGQETDSADDDFDGGMARLTAAGVDKARIIEALRQSFLSPVL TAHPTEVQRKSQLDAEHAIFSLLVEREHLGPGAARRRNDALLAACITQAWQTRLLRNAKLTVRDEIENALSYYQTTFLRQ LPALYAELEEWLGVRDLPCFLRMGSWIGGDRDGNPNVNAETLDIALRRQAEVALRHYLSEVRALGNELSLSRLLVGCSQD LLRLAETSGDDSPHRADEPYRRALIAIKGRLAATLKELTGQEDSKPAPLGTQAYPDASALLADLAIIEKSLAENHGRALI GPRLAPFQRAVKVFGFHLATVDLRQSSDRHAETIGELLRVAKVVEDYDALDEKARQDLLMRLLQDPRLLHVPYLRYSART EEELAVFETARRLRRSHGPLAIRQYIISHTETVSDLLEVLLLQKECGLIEGLIGDPEQKPRAELMVVPLFETIEDLRNAQ GIMADFFALPGMADLVRASGGVQEIMLGYSDSNKDGGFFTSNWELYRVSIALAGFFAAQEGIVLRLFHGRGGTIGRGGGP SHQAILAQPPGTANGLIRLTEQGEVISSKYAQPEIGRRNLETLVAANIEATLLGGDEAPPEAFLEAAHFLSEASTKAYRG LVYDLPGFVDYFYAATPIAEIADLNIGSRPASRKSSRKIEDLRAIPWSFSWGQARVSLPGWFGFGTAVEAFLNDAPEEKL ALLQRMAREWPFFHALLSNMDMVLAKADRKLARRYAALVPDQALAERIFGIIDTEWTRTLHALDEITGVHERLADNPALA HSISRRFPYIAPLNHLQVELLRRWRLGKTDARTYNGILISINGIAAGLRNSG >Mature_931_residues TTKGARTDIMTNLARQADDRLNEEIRLLGQILGETIREQEGDESFDRIETIRRLSVAFERGADAAAGETLDTLLRGLSAE QAVSVIRSFSYFSHLANIAEDHETIRRSIAETGTEEPAGQETDSADDDFDGGMARLTAAGVDKARIIEALRQSFLSPVLT AHPTEVQRKSQLDAEHAIFSLLVEREHLGPGAARRRNDALLAACITQAWQTRLLRNAKLTVRDEIENALSYYQTTFLRQL PALYAELEEWLGVRDLPCFLRMGSWIGGDRDGNPNVNAETLDIALRRQAEVALRHYLSEVRALGNELSLSRLLVGCSQDL LRLAETSGDDSPHRADEPYRRALIAIKGRLAATLKELTGQEDSKPAPLGTQAYPDASALLADLAIIEKSLAENHGRALIG PRLAPFQRAVKVFGFHLATVDLRQSSDRHAETIGELLRVAKVVEDYDALDEKARQDLLMRLLQDPRLLHVPYLRYSARTE EELAVFETARRLRRSHGPLAIRQYIISHTETVSDLLEVLLLQKECGLIEGLIGDPEQKPRAELMVVPLFETIEDLRNAQG IMADFFALPGMADLVRASGGVQEIMLGYSDSNKDGGFFTSNWELYRVSIALAGFFAAQEGIVLRLFHGRGGTIGRGGGPS HQAILAQPPGTANGLIRLTEQGEVISSKYAQPEIGRRNLETLVAANIEATLLGGDEAPPEAFLEAAHFLSEASTKAYRGL VYDLPGFVDYFYAATPIAEIADLNIGSRPASRKSSRKIEDLRAIPWSFSWGQARVSLPGWFGFGTAVEAFLNDAPEEKLA LLQRMAREWPFFHALLSNMDMVLAKADRKLARRYAALVPDQALAERIFGIIDTEWTRTLHALDEITGVHERLADNPALAH SISRRFPYIAPLNHLQVELLRRWRLGKTDARTYNGILISINGIAAGLRNSG
Specific function: Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle [H]
COG id: COG2352
COG function: function code C; Phosphoenolpyruvate carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEPCase type 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790393, Length=939, Percent_Identity=36.3152289669862, Blast_Score=417, Evalue=1e-117,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021135 - InterPro: IPR018129 - InterPro: IPR022805 - InterPro: IPR015813 [H]
Pfam domain/function: PF00311 PEPcase [H]
EC number: =4.1.1.31 [H]
Molecular weight: Translated: 103142; Mature: 103011
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: PS00781 PEPCASE_1 ; PS00393 PEPCASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKGARTDIMTNLARQADDRLNEEIRLLGQILGETIREQEGDESFDRIETIRRLSVAFE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RGADAAAGETLDTLLRGLSAEQAVSVIRSFSYFSHLANIAEDHETIRRSIAETGTEEPAG CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC QETDSADDDFDGGMARLTAAGVDKARIIEALRQSFLSPVLTAHPTEVQRKSQLDAEHAIF CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHH SLLVEREHLGPGAARRRNDALLAACITQAWQTRLLRNAKLTVRDEIENALSYYQTTFLRQ HHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LPALYAELEEWLGVRDLPCFLRMGSWIGGDRDGNPNVNAETLDIALRRQAEVALRHYLSE HHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VRALGNELSLSRLLVGCSQDLLRLAETSGDDSPHRADEPYRRALIAIKGRLAATLKELTG HHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC QEDSKPAPLGTQAYPDASALLADLAIIEKSLAENHGRALIGPRLAPFQRAVKVFGFHLAT CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHE VDLRQSSDRHAETIGELLRVAKVVEDYDALDEKARQDLLMRLLQDPRLLHVPYLRYSART EEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHCCCC EEELAVFETARRLRRSHGPLAIRQYIISHTETVSDLLEVLLLQKECGLIEGLIGDPEQKP HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCC RAELMVVPLFETIEDLRNAQGIMADFFALPGMADLVRASGGVQEIMLGYSDSNKDGGFFT CCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHCCCCCCCCCCEEE SNWELYRVSIALAGFFAAQEGIVLRLFHGRGGTIGRGGGPSHQAILAQPPGTANGLIRLT CCCEEEEHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCEEEEC EQGEVISSKYAQPEIGRRNLETLVAANIEATLLGGDEAPPEAFLEAAHFLSEASTKAYRG CCCCHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHC LVYDLPGFVDYFYAATPIAEIADLNIGSRPASRKSSRKIEDLRAIPWSFSWGQARVSLPG HHHCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCC WFGFGTAVEAFLNDAPEEKLALLQRMAREWPFFHALLSNMDMVLAKADRKLARRYAALVP CHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC DQALAERIFGIIDTEWTRTLHALDEITGVHERLADNPALAHSISRRFPYIAPLNHLQVEL CHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHH LRRWRLGKTDARTYNGILISINGIAAGLRNSG HHHHCCCCCCCCCCCCEEEEECHHHHCCCCCC >Mature Secondary Structure TTKGARTDIMTNLARQADDRLNEEIRLLGQILGETIREQEGDESFDRIETIRRLSVAFE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RGADAAAGETLDTLLRGLSAEQAVSVIRSFSYFSHLANIAEDHETIRRSIAETGTEEPAG CCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC QETDSADDDFDGGMARLTAAGVDKARIIEALRQSFLSPVLTAHPTEVQRKSQLDAEHAIF CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHH SLLVEREHLGPGAARRRNDALLAACITQAWQTRLLRNAKLTVRDEIENALSYYQTTFLRQ HHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LPALYAELEEWLGVRDLPCFLRMGSWIGGDRDGNPNVNAETLDIALRRQAEVALRHYLSE HHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VRALGNELSLSRLLVGCSQDLLRLAETSGDDSPHRADEPYRRALIAIKGRLAATLKELTG HHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC QEDSKPAPLGTQAYPDASALLADLAIIEKSLAENHGRALIGPRLAPFQRAVKVFGFHLAT CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHE VDLRQSSDRHAETIGELLRVAKVVEDYDALDEKARQDLLMRLLQDPRLLHVPYLRYSART EEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHCCCC EEELAVFETARRLRRSHGPLAIRQYIISHTETVSDLLEVLLLQKECGLIEGLIGDPEQKP HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCC RAELMVVPLFETIEDLRNAQGIMADFFALPGMADLVRASGGVQEIMLGYSDSNKDGGFFT CCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHCCCCCCCCCCEEE SNWELYRVSIALAGFFAAQEGIVLRLFHGRGGTIGRGGGPSHQAILAQPPGTANGLIRLT CCCEEEEHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCEEEEC EQGEVISSKYAQPEIGRRNLETLVAANIEATLLGGDEAPPEAFLEAAHFLSEASTKAYRG CCCCHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHC LVYDLPGFVDYFYAATPIAEIADLNIGSRPASRKSSRKIEDLRAIPWSFSWGQARVSLPG HHHCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCC WFGFGTAVEAFLNDAPEEKLALLQRMAREWPFFHALLSNMDMVLAKADRKLARRYAALVP CHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC DQALAERIFGIIDTEWTRTLHALDEITGVHERLADNPALAHSISRRFPYIAPLNHLQVEL CHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHH LRRWRLGKTDARTYNGILISINGIAAGLRNSG HHHHCCCCCCCCCCCCEEEEECHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA