Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
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Accession | NC_010581 |
Length | 4,170,153 |
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The map label for this gene is lgrC [H]
Identifier: 182677140
GI number: 182677140
Start: 167209
End: 169008
Strand: Direct
Name: lgrC [H]
Synonym: Bind_0139
Alternate gene names: 182677140
Gene position: 167209-169008 (Clockwise)
Preceding gene: 182677139
Following gene: 182677144
Centisome position: 4.01
GC content: 59.33
Gene sequence:
>1800_bases ATGTATCCGATGCGCTCTGTCTCGGTCCGGCGGGAGAATGCCGGTCGGGAAACCACTGATCTTGAAGCCCCTGATCTCGA AGCGAAGGCCCGGACTCGTGACGGCGAGACTGATCACGTATTCTCGGCAACAATGCTTGTGCCGGGCTGGCGCGTGCAGG AACGCATCGCCTTCCATGCCCAGCGCCAGCCGGACGAAATCGCCCTTGTCCAGGGGCCTGTCCGCCTGACCTATGATCAG ATCAACGCGAGGGCCAATCGCCTCGCGCGCTATTTCGTGTCCTTGGGATTGCGGCCAGCGGCGCCGGTTGGCCTGTGTAT GCGCAATGGTCTCGTATCCATGATCGCTTGTCTCGCCGTGCTCAAGGCTGGCGGCGCTTGCGTCCCGCTTGATCCCATCA TGGGACCCCATTGGCTCGCCGCTTTCATCATCCAGGCGGGGATTGATGTCGCGATCGTGGACGATCACCATGCACTCGAT CTTTTCGAAGATGCCCCGCGTCTCAATCTGCTCGATTATGAAAGCATCTCGGCGGCGGCGGAGTTAGAATCCGATGCCGA TTTCGACATCGCCTGGGATACGGATTCCCTGGCTCTGATCCTGCCGGTCTCGCAGGTCGCGGGGCCGCGTGGCGTGGAAA TGACCCATCGGGCCTTGCATCATTGTTGTGATCTTGCGCATGGTCTCGATTTTTCCGCTGCGACCGTGGCTTTGCAAATG GTCTTTGCTCCGCAAGAATTGGCTTGGTTTCAGAACCTGAGCCTGCTCATTGCCGGCGGCAGGCTCGTTTTTTATGGCGC CATCTGGCCGGAGACGGCGGAGATCGCGAATCTGATCCGTTCCGAGACGATCGACACGTCCTTTCTCACGCCGAGCCTTT GCGGTTGGCTCCTTGACGAGGATCCAAGCCTGTTCGCGCCTCTGGAGCGGGTCGTGATCGGCGAACAGGATTTGGCACCA GTGCCTCTGGCACCGATCCATTTGCGTATTCTTCTGCGCCAACTCGTCAAAAGGGGTGTTAAAGGCGCAACCAAGGGTGA GATCGTGTTGCTCTATGGTCCTGCCGAAGCGCCTGCCGCCCTGATGACGAGGCTCTGGCATGAAGATGATGCGGATGATG TCACACGGATCGTACCGGAGCCTCTCAACAATGCCCGCGTTCAGCTCCTCGACACGCGGCGGCGCCCCTGTCCCGATGGC GTCCTCGGTGAAATTTGTCTCGGTGGTGAAGGATTGGCGAGCGGCTATCGTCGTGATGAAAGACTCAGCCAGCAAAGTTT CATTCCTGATCCCGCTCAGCCCGAGGACAAGCTGTTCCGCACAGGCGATTACGCGCGGCGTCGCCTGGATGGCACGTTCG AAAGACTTGGCCGGCTCGATGAAAAAGTCATTTTGAGCGGTTACCGGGTCGAATTGAAAGCCATCGAACGGGTTCTGAGA GCGCAAAAGGGCGTGGCCGATGCTGTGTGTGATTATCGCCGCAGCCGCGCCTATGGGGAATCCGTGATTGCCTTTTTCGT TGAGGCGAGTCCCGGCGCGATCAACGAAACGCGGCTTCTTGCTGCCTTGCGCCGGCTGCTGCCGCCTTTCATGGTGCCGG ATTTCCTACGCAAGCTCGAAACTTTGCCGCTTTTGCCGGATGGTCATCCCGACCGGCAGGCTTTGGCCGCTCTTCCCATG TTCGCACCGTCTCCGAAACAACGCCAGCCATCGTTTGGGATGAGTAAGGAGTTTCTGCGCGGAGCCCTGCGCCGTTTCGG TCTCGGACGGGTGCCAGAAGACAAAGCCATTTCTGGTTGA
Upstream 100 bases:
>100_bases TGACAAGGACTTAAACAAAGAATGGTTTCCTGAAAGCGGAATGAGCCGACCAGGCGCGTCGATGAACACGCATGGCCGGG ACCGCTTTTAGGAGAATGGC
Downstream 100 bases:
>100_bases GCGGCTTTGAAAAGAAATGATATCAGAGGGTTTGGTTTGACCCATCAAAGCATCAAACCCAAAAGTGATCATCACTTTTG GGTTTGAGTTTATCCATCGA
Product: AMP-dependent synthetase and ligase
Products: pyrophosphate; AMP; enterobactin; pyrophosphate; L-Seryl-AMP [C]
Alternate protein names: ATP-dependent valine adenylase; ValA; Valine activase; ATP-dependent D-valine adenylase; D-ValA; D-valine activase; Valine racemase [ATP-hydrolyzing]; ATP-dependent tryptophan adenylase; TrpA; Tryptophan activase; ATP-dependent D-leucine adenylase; D-LeuA; D-leucine activase; Leucine racemase [ATP-hydrolyzing]; ATP-dependent tryptophan/phenylalanine/tyrosine adenylase; Trp/Phe/TyrA; Tryptophan/phenylalanine/tyrosine activase; ATP-dependent D-leucine adenylase; D-LeuA; D-leucine activase; Leucine racemase [ATP-hydrolyzing] [H]
Number of amino acids: Translated: 599; Mature: 599
Protein sequence:
>599_residues MYPMRSVSVRRENAGRETTDLEAPDLEAKARTRDGETDHVFSATMLVPGWRVQERIAFHAQRQPDEIALVQGPVRLTYDQ INARANRLARYFVSLGLRPAAPVGLCMRNGLVSMIACLAVLKAGGACVPLDPIMGPHWLAAFIIQAGIDVAIVDDHHALD LFEDAPRLNLLDYESISAAAELESDADFDIAWDTDSLALILPVSQVAGPRGVEMTHRALHHCCDLAHGLDFSAATVALQM VFAPQELAWFQNLSLLIAGGRLVFYGAIWPETAEIANLIRSETIDTSFLTPSLCGWLLDEDPSLFAPLERVVIGEQDLAP VPLAPIHLRILLRQLVKRGVKGATKGEIVLLYGPAEAPAALMTRLWHEDDADDVTRIVPEPLNNARVQLLDTRRRPCPDG VLGEICLGGEGLASGYRRDERLSQQSFIPDPAQPEDKLFRTGDYARRRLDGTFERLGRLDEKVILSGYRVELKAIERVLR AQKGVADAVCDYRRSRAYGESVIAFFVEASPGAINETRLLAALRRLLPPFMVPDFLRKLETLPLLPDGHPDRQALAALPM FAPSPKQRQPSFGMSKEFLRGALRRFGLGRVPEDKAISG
Sequences:
>Translated_599_residues MYPMRSVSVRRENAGRETTDLEAPDLEAKARTRDGETDHVFSATMLVPGWRVQERIAFHAQRQPDEIALVQGPVRLTYDQ INARANRLARYFVSLGLRPAAPVGLCMRNGLVSMIACLAVLKAGGACVPLDPIMGPHWLAAFIIQAGIDVAIVDDHHALD LFEDAPRLNLLDYESISAAAELESDADFDIAWDTDSLALILPVSQVAGPRGVEMTHRALHHCCDLAHGLDFSAATVALQM VFAPQELAWFQNLSLLIAGGRLVFYGAIWPETAEIANLIRSETIDTSFLTPSLCGWLLDEDPSLFAPLERVVIGEQDLAP VPLAPIHLRILLRQLVKRGVKGATKGEIVLLYGPAEAPAALMTRLWHEDDADDVTRIVPEPLNNARVQLLDTRRRPCPDG VLGEICLGGEGLASGYRRDERLSQQSFIPDPAQPEDKLFRTGDYARRRLDGTFERLGRLDEKVILSGYRVELKAIERVLR AQKGVADAVCDYRRSRAYGESVIAFFVEASPGAINETRLLAALRRLLPPFMVPDFLRKLETLPLLPDGHPDRQALAALPM FAPSPKQRQPSFGMSKEFLRGALRRFGLGRVPEDKAISG >Mature_599_residues MYPMRSVSVRRENAGRETTDLEAPDLEAKARTRDGETDHVFSATMLVPGWRVQERIAFHAQRQPDEIALVQGPVRLTYDQ INARANRLARYFVSLGLRPAAPVGLCMRNGLVSMIACLAVLKAGGACVPLDPIMGPHWLAAFIIQAGIDVAIVDDHHALD LFEDAPRLNLLDYESISAAAELESDADFDIAWDTDSLALILPVSQVAGPRGVEMTHRALHHCCDLAHGLDFSAATVALQM VFAPQELAWFQNLSLLIAGGRLVFYGAIWPETAEIANLIRSETIDTSFLTPSLCGWLLDEDPSLFAPLERVVIGEQDLAP VPLAPIHLRILLRQLVKRGVKGATKGEIVLLYGPAEAPAALMTRLWHEDDADDVTRIVPEPLNNARVQLLDTRRRPCPDG VLGEICLGGEGLASGYRRDERLSQQSFIPDPAQPEDKLFRTGDYARRRLDGTFERLGRLDEKVILSGYRVELKAIERVLR AQKGVADAVCDYRRSRAYGESVIAFFVEASPGAINETRLLAALRRLLPPFMVPDFLRKLETLPLLPDGHPDRQALAALPM FAPSPKQRQPSFGMSKEFLRGALRRFGLGRVPEDKAISG
Specific function: Activates the 7th to 12th amino acids (Val, D-Val, Trp, D-Leu, Xaa and D-Leu) in linear gramicidin and catalyzes the formation of the peptide bond between them. This enzyme is also responsible for the epimerization of the 8th (D-Val), the 10th (D- Leu) an
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 6 acyl carrier domains [H]
Homologues:
Organism=Escherichia coli, GI1786801, Length=549, Percent_Identity=26.0473588342441, Blast_Score=117, Evalue=1e-27, Organism=Drosophila melanogaster, GI24648676, Length=182, Percent_Identity=34.0659340659341, Blast_Score=82, Evalue=8e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010071 - InterPro: IPR009081 - InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR023213 - InterPro: IPR001242 - InterPro: IPR010060 - InterPro: IPR006163 - InterPro: IPR020806 - InterPro: IPR006162 [H]
Pfam domain/function: PF00501 AMP-binding; PF00668 Condensation; PF00550 PP-binding [H]
EC number: 2.7.7.- [C]
Molecular weight: Translated: 66121; Mature: 66121
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYPMRSVSVRRENAGRETTDLEAPDLEAKARTRDGETDHVFSATMLVPGWRVQERIAFHA CCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHH QRQPDEIALVQGPVRLTYDQINARANRLARYFVSLGLRPAAPVGLCMRNGLVSMIACLAV CCCCCCEEEEECCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHH LKAGGACVPLDPIMGPHWLAAFIIQAGIDVAIVDDHHALDLFEDAPRLNLLDYESISAAA HHCCCCEEECCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHCCCCCCEECCHHHHHHH ELESDADFDIAWDTDSLALILPVSQVAGPRGVEMTHRALHHCCDLAHGLDFSAATVALQM HCCCCCCCEEEECCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH VFAPQELAWFQNLSLLIAGGRLVFYGAIWPETAEIANLIRSETIDTSFLTPSLCGWLLDE HHCCHHHHHHHCCEEEEECCEEEEEECCCCCHHHHHHHHHHHCCCCHHCCHHHHHHHHCC DPSLFAPLERVVIGEQDLAPVPLAPIHLRILLRQLVKRGVKGATKGEIVLLYGPAEAPAA CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHH LMTRLWHEDDADDVTRIVPEPLNNARVQLLDTRRRPCPDGVLGEICLGGEGLASGYRRDE HHHHHHCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCHHHHEECCCHHHHHHHHHH RLSQQSFIPDPAQPEDKLFRTGDYARRRLDGTFERLGRLDEKVILSGYRVELKAIERVLR HHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHCCCEEHHHHHHHHHH AQKGVADAVCDYRRSRAYGESVIAFFVEASPGAINETRLLAALRRLLPPFMVPDFLRKLE HHCCHHHHHHHHHHHHHHHCEEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH TLPLLPDGHPDRQALAALPMFAPSPKQRQPSFGMSKEFLRGALRRFGLGRVPEDKAISG CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MYPMRSVSVRRENAGRETTDLEAPDLEAKARTRDGETDHVFSATMLVPGWRVQERIAFHA CCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHH QRQPDEIALVQGPVRLTYDQINARANRLARYFVSLGLRPAAPVGLCMRNGLVSMIACLAV CCCCCCEEEEECCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHH LKAGGACVPLDPIMGPHWLAAFIIQAGIDVAIVDDHHALDLFEDAPRLNLLDYESISAAA HHCCCCEEECCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHCCCCCCEECCHHHHHHH ELESDADFDIAWDTDSLALILPVSQVAGPRGVEMTHRALHHCCDLAHGLDFSAATVALQM HCCCCCCCEEEECCCCEEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH VFAPQELAWFQNLSLLIAGGRLVFYGAIWPETAEIANLIRSETIDTSFLTPSLCGWLLDE HHCCHHHHHHHCCEEEEECCEEEEEECCCCCHHHHHHHHHHHCCCCHHCCHHHHHHHHCC DPSLFAPLERVVIGEQDLAPVPLAPIHLRILLRQLVKRGVKGATKGEIVLLYGPAEAPAA CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHH LMTRLWHEDDADDVTRIVPEPLNNARVQLLDTRRRPCPDGVLGEICLGGEGLASGYRRDE HHHHHHCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCHHHHEECCCHHHHHHHHHH RLSQQSFIPDPAQPEDKLFRTGDYARRRLDGTFERLGRLDEKVILSGYRVELKAIERVLR HHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHCCCEEHHHHHHHHHH AQKGVADAVCDYRRSRAYGESVIAFFVEASPGAINETRLLAALRRLLPPFMVPDFLRKLE HHCCHHHHHHHHHHHHHHHCEEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH TLPLLPDGHPDRQALAALPMFAPSPKQRQPSFGMSKEFLRGALRRFGLGRVPEDKAISG CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: Phosphopantetheine. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 6 ATP; L-serine; 2,3-dihydroxybenzoate [C]
Specific reaction: 6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate = 6 pyrophosphate + 6 AMP + enterobactin ATP + L-serine = pyrophosphate + L-Seryl-AMP 6 ATP + 3 L-serine + 3 2,3-dihydroxybenzoate = 6 pyrophosphate + 6 AMP + enterobactin ATP + L-serine = pyrophosphate + L-Ser
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA