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The map label for this gene is ycdQ [C]

Identifier: 182677137

GI number: 182677137

Start: 160278

End: 161213

Strand: Direct

Name: ycdQ [C]

Synonym: Bind_0136

Alternate gene names: 182677137

Gene position: 160278-161213 (Clockwise)

Preceding gene: 182677134

Following gene: 182677139

Centisome position: 3.84

GC content: 50.96

Gene sequence:

>936_bases
ATGGCCGGCATATCGGTCATCGTGCCCGTCTATAATGGCGCGCGTCATCTTCCCGCCTTGTTGGATGCCTTTGAGGCGCA
GACACAAGATCCGGCTCAGGTGGAATATATTATCGTTAACAATAAGAGCCGTGATCGGACGAGCGAAATCGCTTCGAGCT
ACGCGAAGACCGCAAAAATCAATCTGACCTGCATTGATGAAAATGATATACAAGGATCCTATGCGGCCAGGAACAAAGGC
ATCCATACATCAAGAGGTGAGTTTCTTCTGTTTACGGATGCTGATTGCGTTCCTCATCCGGATTGGATCAAGAATATCAT
TCAGGGTTTCGAGAATCCGAATGTTGGCGCCGTCGCCGGGACAATCTTGCCTTATCCCGGCACGACATTGCTGGAAGAAT
TCGCGGCCCATGCTGGCATTCTGTCGCATGTCCACTCTCTCAACCACGCATACATGCCCTTCGCTCAGACCGCAAATGTC
GCCTTCAGGCGAGATGTTTTTCGCAAAACGGGTCTTTTCCGGTCAGGCTTGAGGACTGGCGGCGACGCGGATTTGAACTG
GCGGATGCAGAAGACAACCGGTTACAAACTCATTCATCAGGAAAATGCCGTCATTTTACACAGGCATCGCCGGAGCTTCA
GGGATCTCTATGAGCAATTTGAACGCTATGGGCGTGCCGCCGTTTACCTTGATGACATGCACGGCTGGAAAGCGCCGCGG
GAGCTGGATTTCCCCTATTCTTTCTATCAACTGGTCACATGGCTCTTCTTCAAATATCCCGTGCTTCTGACGAAATATCA
TGCCGCCAGCATCCCGCGTGTCGAAGTCTACCTCGAACCGTTGACGCTCTATATCAAATTATGCAGTGCCATCGGAACCG
CCAAGGCAAGACAATTGGAGCGGGTGAATGATTTGAGCATCGAATATTTGTCCTGA

Upstream 100 bases:

>100_bases
TTTTCCGCGATTCCTCCGGAGGCCGTGATCCAATGCAGCCGCATAGCAGCAAAAATGTATCGGCGTCCGCCATCTTCCAA
GATCGGAGCACAGCGTTTTG

Downstream 100 bases:

>100_bases
AAAGGAGGCTCCGCATTCGCATACACTAACGACACGTACCTAATGACATGGCGGCGCGCCTGGATGTCCGCATTCAGACT
GTTTCTGTTGCGGTGGATGG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MAGISVIVPVYNGARHLPALLDAFEAQTQDPAQVEYIIVNNKSRDRTSEIASSYAKTAKINLTCIDENDIQGSYAARNKG
IHTSRGEFLLFTDADCVPHPDWIKNIIQGFENPNVGAVAGTILPYPGTTLLEEFAAHAGILSHVHSLNHAYMPFAQTANV
AFRRDVFRKTGLFRSGLRTGGDADLNWRMQKTTGYKLIHQENAVILHRHRRSFRDLYEQFERYGRAAVYLDDMHGWKAPR
ELDFPYSFYQLVTWLFFKYPVLLTKYHAASIPRVEVYLEPLTLYIKLCSAIGTAKARQLERVNDLSIEYLS

Sequences:

>Translated_311_residues
MAGISVIVPVYNGARHLPALLDAFEAQTQDPAQVEYIIVNNKSRDRTSEIASSYAKTAKINLTCIDENDIQGSYAARNKG
IHTSRGEFLLFTDADCVPHPDWIKNIIQGFENPNVGAVAGTILPYPGTTLLEEFAAHAGILSHVHSLNHAYMPFAQTANV
AFRRDVFRKTGLFRSGLRTGGDADLNWRMQKTTGYKLIHQENAVILHRHRRSFRDLYEQFERYGRAAVYLDDMHGWKAPR
ELDFPYSFYQLVTWLFFKYPVLLTKYHAASIPRVEVYLEPLTLYIKLCSAIGTAKARQLERVNDLSIEYLS
>Mature_310_residues
AGISVIVPVYNGARHLPALLDAFEAQTQDPAQVEYIIVNNKSRDRTSEIASSYAKTAKINLTCIDENDIQGSYAARNKGI
HTSRGEFLLFTDADCVPHPDWIKNIIQGFENPNVGAVAGTILPYPGTTLLEEFAAHAGILSHVHSLNHAYMPFAQTANVA
FRRDVFRKTGLFRSGLRTGGDADLNWRMQKTTGYKLIHQENAVILHRHRRSFRDLYEQFERYGRAAVYLDDMHGWKAPRE
LDFPYSFYQLVTWLFFKYPVLLTKYHAASIPRVEVYLEPLTLYIKLCSAIGTAKARQLERVNDLSIEYLS

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 35331; Mature: 35199

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGISVIVPVYNGARHLPALLDAFEAQTQDPAQVEYIIVNNKSRDRTSEIASSYAKTAKI
CCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHEEE
NLTCIDENDIQGSYAARNKGIHTSRGEFLLFTDADCVPHPDWIKNIIQGFENPNVGAVAG
EEEEECCCCCCCCHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEE
TILPYPGTTLLEEFAAHAGILSHVHSLNHAYMPFAQTANVAFRRDVFRKTGLFRSGLRTG
EECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
GDADLNWRMQKTTGYKLIHQENAVILHRHRRSFRDLYEQFERYGRAAVYLDDMHGWKAPR
CCCCCEEEEECCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCC
ELDFPYSFYQLVTWLFFKYPVLLTKYHAASIPRVEVYLEPLTLYIKLCSAIGTAKARQLE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH
RVNDLSIEYLS
HHHCCEEEECC
>Mature Secondary Structure 
AGISVIVPVYNGARHLPALLDAFEAQTQDPAQVEYIIVNNKSRDRTSEIASSYAKTAKI
CCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHEEE
NLTCIDENDIQGSYAARNKGIHTSRGEFLLFTDADCVPHPDWIKNIIQGFENPNVGAVAG
EEEEECCCCCCCCHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEE
TILPYPGTTLLEEFAAHAGILSHVHSLNHAYMPFAQTANVAFRRDVFRKTGLFRSGLRTG
EECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
GDADLNWRMQKTTGYKLIHQENAVILHRHRRSFRDLYEQFERYGRAAVYLDDMHGWKAPR
CCCCCEEEEECCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCC
ELDFPYSFYQLVTWLFFKYPVLLTKYHAASIPRVEVYLEPLTLYIKLCSAIGTAKARQLE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH
RVNDLSIEYLS
HHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7836301 [H]