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The map label for this gene is yfhF [C]

Identifier: 182677105

GI number: 182677105

Start: 117065

End: 117439

Strand: Direct

Name: yfhF [C]

Synonym: Bind_0103

Alternate gene names: 182677105

Gene position: 117065-117439 (Clockwise)

Preceding gene: 182677104

Following gene: 182677106

Centisome position: 2.81

GC content: 57.33

Gene sequence:

>375_bases
ATGGCGAATTCCGCCTTTTCAATTCTATCCCTGACGGACAATGCTGCTGCCCGCACCCGGGAGCTTTTGGCTCAGGCGGG
TAATGCCGATAAGCTTTTGAAAATCGGCATCAAGAACGGTGGTTGCGCCGGCATGTCCTATACGCTCGATCTGATCGACG
AGCTTGGCCCCTTGGATGAAATCATCGAGGACAAGGGTGTACGCCTCGCCGTCGCGCCGCAAGACGTGATGTTTCTGCTT
GGAACGCAAGTGGATTTCGTCACGGATCGATTAGGGTCGAGCTTCACCTTCCGCAATCCAAACCAGACTGGCAGCTGCGG
CTGCGGGGAATCCGTCTCGATCACGCCCGCTCAGCCCGAAACAGCCCGGTCCTGA

Upstream 100 bases:

>100_bases
TCTAAAGCTGAAGTCAGCTTAGCCTTCTTCGGCTTTCAAGCCCTCAACAAAAGCCGAACGCCTCCTATATAGGCTTTACG
CCTAGTGTGAGGAGTTTGGC

Downstream 100 bases:

>100_bases
GGCCAGGTGAGAGGCCCCTTACAGCATCGCCCGTGGATTCGGATTGAGGAGCGATACTGTGCATTGCATCAGCATGACCT
TCTTAAAACTTAATCACACT

Product: iron-sulfur cluster assembly accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MANSAFSILSLTDNAAARTRELLAQAGNADKLLKIGIKNGGCAGMSYTLDLIDELGPLDEIIEDKGVRLAVAPQDVMFLL
GTQVDFVTDRLGSSFTFRNPNQTGSCGCGESVSITPAQPETARS

Sequences:

>Translated_124_residues
MANSAFSILSLTDNAAARTRELLAQAGNADKLLKIGIKNGGCAGMSYTLDLIDELGPLDEIIEDKGVRLAVAPQDVMFLL
GTQVDFVTDRLGSSFTFRNPNQTGSCGCGESVSITPAQPETARS
>Mature_123_residues
ANSAFSILSLTDNAAARTRELLAQAGNADKLLKIGIKNGGCAGMSYTLDLIDELGPLDEIIEDKGVRLAVAPQDVMFLLG
TQVDFVTDRLGSSFTFRNPNQTGSCGCGESVSITPAQPETARS

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI52426768, Length=106, Percent_Identity=40.5660377358491, Blast_Score=87, Evalue=3e-18,
Organism=Homo sapiens, GI160420328, Length=107, Percent_Identity=32.7102803738318, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1788877, Length=106, Percent_Identity=44.3396226415094, Blast_Score=99, Evalue=6e-23,
Organism=Escherichia coli, GI1787974, Length=111, Percent_Identity=41.4414414414414, Blast_Score=81, Evalue=2e-17,
Organism=Escherichia coli, GI1786351, Length=106, Percent_Identity=38.6792452830189, Blast_Score=81, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI25146411, Length=106, Percent_Identity=47.1698113207547, Blast_Score=110, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI193209025, Length=106, Percent_Identity=47.1698113207547, Blast_Score=110, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6323001, Length=108, Percent_Identity=37.037037037037, Blast_Score=97, Evalue=6e-22,
Organism=Drosophila melanogaster, GI24642263, Length=106, Percent_Identity=42.4528301886792, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 13052; Mature: 12921

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANSAFSILSLTDNAAARTRELLAQAGNADKLLKIGIKNGGCAGMSYTLDLIDELGPLDE
CCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCHHH
IIEDKGVRLAVAPQDVMFLLGTQVDFVTDRLGSSFTFRNPNQTGSCGCGESVSITPAQPE
HHHCCCCEEEECCHHEEHHHCCCHHHHHHHCCCCEEECCCCCCCCCCCCCCCEECCCCCC
TARS
CCCC
>Mature Secondary Structure 
ANSAFSILSLTDNAAARTRELLAQAGNADKLLKIGIKNGGCAGMSYTLDLIDELGPLDE
CCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCHHH
IIEDKGVRLAVAPQDVMFLLGTQVDFVTDRLGSSFTFRNPNQTGSCGCGESVSITPAQPE
HHHCCCCEEEECCHHEEHHHCCCHHHHHHHCCCCEEECCCCCCCCCCCCCCCEECCCCCC
TARS
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]