Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
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Accession | NC_010581 |
Length | 4,170,153 |
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The map label for this gene is yitW [H]
Identifier: 182677104
GI number: 182677104
Start: 116470
End: 116862
Strand: Direct
Name: yitW [H]
Synonym: Bind_0102
Alternate gene names: 182677104
Gene position: 116470-116862 (Clockwise)
Preceding gene: 182677103
Following gene: 182677105
Centisome position: 2.79
GC content: 56.23
Gene sequence:
>393_bases ATGTCCGAATCGCAAACCGCCGAAGTCCAGGAAGTTCAGCCGAACGAACCTGCGTGGATTTTTGATGCCGGTATTTCCCA GAACGAGCGGATCCGCTACACCAATGATATTGTAGCGGCTTTCAAAACCGTCTTTGATCCGGAAATTCCCTGCGACGTCT ATGAGTTGGGCCTTATCTACAAGGTCGATATCGACGAGAACCGGTTGATCCGGATCGAAATGACGCTGACCGCTCCTGGT TGTCCGGTGGCTGGCGAAATCACCCGCTCGATCGAGACGGCGATCGGCACGGTGCCCGGCACGCTCGGCGTCATCGTCAA TATCGTCTTCGAGCCGGCGTGGGATCAAGGCCGCATGTCCGACGAGGCGCGCATTTCCCTCGATATGTTCTGA
Upstream 100 bases:
>100_bases CTTCCTTCGCTGCTTACAATACGTTCGAGGAAGTCGACAAACTTGCCGAGGCGTTGATCCGAGCCGAAGGCCTTTTTGCT TGAGAGATGAGGAATTCGTC
Downstream 100 bases:
>100_bases TTGAGGTTCGGTGGACGAGGTTCACCGGACGCTTTCAGCCTTTGAGTTCAAAACCTCAGGATCGTGAAGGCTGGTGAGCC TTTGCGGACATGGTTTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MSESQTAEVQEVQPNEPAWIFDAGISQNERIRYTNDIVAAFKTVFDPEIPCDVYELGLIYKVDIDENRLIRIEMTLTAPG CPVAGEITRSIETAIGTVPGTLGVIVNIVFEPAWDQGRMSDEARISLDMF
Sequences:
>Translated_130_residues MSESQTAEVQEVQPNEPAWIFDAGISQNERIRYTNDIVAAFKTVFDPEIPCDVYELGLIYKVDIDENRLIRIEMTLTAPG CPVAGEITRSIETAIGTVPGTLGVIVNIVFEPAWDQGRMSDEARISLDMF >Mature_129_residues SESQTAEVQEVQPNEPAWIFDAGISQNERIRYTNDIVAAFKTVFDPEIPCDVYELGLIYKVDIDENRLIRIEMTLTAPGC PVAGEITRSIETAIGTVPGTLGVIVNIVFEPAWDQGRMSDEARISLDMF
Specific function: Unknown
COG id: COG2151
COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MIP18 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002744 [H]
Pfam domain/function: PF01883 DUF59 [H]
EC number: NA
Molecular weight: Translated: 14466; Mature: 14334
Theoretical pI: Translated: 3.88; Mature: 3.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESQTAEVQEVQPNEPAWIFDAGISQNERIRYTNDIVAAFKTVFDPEIPCDVYELGLIY CCCCCCCCCEECCCCCCCEEEECCCCCCCEEEEHHHHHHHHHHHCCCCCCCCEEECCEEE KVDIDENRLIRIEMTLTAPGCPVAGEITRSIETAIGTVPGTLGVIVNIVFEPAWDQGRMS EEECCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHEEEEEEECCCCCCCCCC DEARISLDMF CCCEEEEECC >Mature Secondary Structure SESQTAEVQEVQPNEPAWIFDAGISQNERIRYTNDIVAAFKTVFDPEIPCDVYELGLIY CCCCCCCCEECCCCCCCEEEECCCCCCCEEEEHHHHHHHHHHHCCCCCCCCEEECCEEE KVDIDENRLIRIEMTLTAPGCPVAGEITRSIETAIGTVPGTLGVIVNIVFEPAWDQGRMS EEECCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHEEEEEEECCCCCCCCCC DEARISLDMF CCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353931; 9025291; 9384377 [H]