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The map label for this gene is sufC [C]

Identifier: 182677101

GI number: 182677101

Start: 112922

End: 113677

Strand: Direct

Name: sufC [C]

Synonym: Bind_0099

Alternate gene names: 182677101

Gene position: 112922-113677 (Clockwise)

Preceding gene: 182677100

Following gene: 182677102

Centisome position: 2.71

GC content: 56.48

Gene sequence:

>756_bases
ATGCTCGAAGTCAAGAATCTCAACGTTTCTATCGGCGACCGCAAAATCCTGAACGACTTCTGCATCACTGTGAAGGATGG
TGAAGTCGCAGCTATCATGGGTCCGAACGGGACGGGTAAATCGACCCTGTCCTATGTCATGTCGGGCCGCCCCGGTTATA
CGGTCGAATCCGGCGAGGTTCTGCTGAATGGCGTCAATCTGCTCGATTTCGAACCGAACGAGCGCGCGGCCAAAGGTCTT
TTCCTCGCCTTCCAATATCCTTTGGAAATTCCTGGCGTTGCGACCATGACCTTCCTCAAGGCCGCTCTGAACGCGCAGCG
TAAATATCGTGGCGAGACTGAACTCTCCACGCCCGAACTGATGAAGCGCGTGAATGCGGCGGCTTCCAAGCTCGGGATCA
AATCCGACATGATGAAGCGCGCCTTGAATGTCGGCTTCTCGGGTGGCGAAAAGAAGCGCATGGACATTCTCCAGATGGCG
CTGCTCGAACCCTCCTTCGGCATTCTCGATGAGACCGATTCCGGCCTTGACATTGACGCGTTGCGCATCGTGTCGGAAGG
TGTGAATGCGCTGCGTTCGCCGACCCGGGGCTTCCTCGTTATCACCCATTATCAGCGCCTGCTCGATTATATCGTTCCCG
ACACCGTCCATGTCATGGCCGGCGGCCGGATCGTGCGGACGGGTGGCAAGGAACTCGCCCTTGAACTCGAGAAAAGCGGC
TATGCCGAATATCTCGGTGAAGAAAAGGCCGCGTAA

Upstream 100 bases:

>100_bases
TGGCGCTTGGCTTAGCGCGCATGGCTTTTGGCTGCCCGCATACTGCCGTGAGGCAGTGTCACGTGGGTTTCCCTTATTCG
AATTTTTAACGAGGGTCATC

Downstream 100 bases:

>100_bases
GGATCCCTGCCGGAAGGAAACCCATTATGAGCGCTCAGATCATTCCTTCGAGAACGCCGGCCGAGACCACGCTCGTCGAG
AGTTTCGGCGCCGTCAAGGC

Product: FeS assembly ATPase SufC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MLEVKNLNVSIGDRKILNDFCITVKDGEVAAIMGPNGTGKSTLSYVMSGRPGYTVESGEVLLNGVNLLDFEPNERAAKGL
FLAFQYPLEIPGVATMTFLKAALNAQRKYRGETELSTPELMKRVNAAASKLGIKSDMMKRALNVGFSGGEKKRMDILQMA
LLEPSFGILDETDSGLDIDALRIVSEGVNALRSPTRGFLVITHYQRLLDYIVPDTVHVMAGGRIVRTGGKELALELEKSG
YAEYLGEEKAA

Sequences:

>Translated_251_residues
MLEVKNLNVSIGDRKILNDFCITVKDGEVAAIMGPNGTGKSTLSYVMSGRPGYTVESGEVLLNGVNLLDFEPNERAAKGL
FLAFQYPLEIPGVATMTFLKAALNAQRKYRGETELSTPELMKRVNAAASKLGIKSDMMKRALNVGFSGGEKKRMDILQMA
LLEPSFGILDETDSGLDIDALRIVSEGVNALRSPTRGFLVITHYQRLLDYIVPDTVHVMAGGRIVRTGGKELALELEKSG
YAEYLGEEKAA
>Mature_251_residues
MLEVKNLNVSIGDRKILNDFCITVKDGEVAAIMGPNGTGKSTLSYVMSGRPGYTVESGEVLLNGVNLLDFEPNERAAKGL
FLAFQYPLEIPGVATMTFLKAALNAQRKYRGETELSTPELMKRVNAAASKLGIKSDMMKRALNVGFSGGEKKRMDILQMA
LLEPSFGILDETDSGLDIDALRIVSEGVNALRSPTRGFLVITHYQRLLDYIVPDTVHVMAGGRIVRTGGKELALELEKSG
YAEYLGEEKAA

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI156105685, Length=236, Percent_Identity=28.8135593220339, Blast_Score=69, Evalue=5e-12,
Organism=Escherichia coli, GI1787972, Length=249, Percent_Identity=52.6104417670683, Blast_Score=269, Evalue=1e-73,
Organism=Escherichia coli, GI1790739, Length=238, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1789593, Length=251, Percent_Identity=25.8964143426295, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1788165, Length=211, Percent_Identity=27.0142180094787, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1790467, Length=231, Percent_Identity=25.974025974026, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1787500, Length=220, Percent_Identity=30, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1788761, Length=254, Percent_Identity=23.6220472440945, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1787029, Length=208, Percent_Identity=25.9615384615385, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI87081791, Length=250, Percent_Identity=25.2, Blast_Score=62, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71992290, Length=261, Percent_Identity=28.3524904214559, Blast_Score=80, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI17565938, Length=216, Percent_Identity=28.2407407407407, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71996809, Length=224, Percent_Identity=26.7857142857143, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 27306; Mature: 27306

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEVKNLNVSIGDRKILNDFCITVKDGEVAAIMGPNGTGKSTLSYVMSGRPGYTVESGEV
CEEEEECCEECCCHHHHHHEEEEEECCCEEEEECCCCCCHHHHHHHHCCCCCCEECCCCE
LLNGVNLLDFEPNERAAKGLFLAFQYPLEIPGVATMTFLKAALNAQRKYRGETELSTPEL
EEECCEEEEECCCCHHHCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH
MKRVNAAASKLGIKSDMMKRALNVGFSGGEKKRMDILQMALLEPSFGILDETDSGLDIDA
HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
LRIVSEGVNALRSPTRGFLVITHYQRLLDYIVPDTVHVMAGGRIVRTGGKELALELEKSG
HHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCEEEEECCEEEECCCCEEEEEECCCC
YAEYLGEEKAA
HHHHHCCCCCC
>Mature Secondary Structure
MLEVKNLNVSIGDRKILNDFCITVKDGEVAAIMGPNGTGKSTLSYVMSGRPGYTVESGEV
CEEEEECCEECCCHHHHHHEEEEEECCCEEEEECCCCCCHHHHHHHHCCCCCCEECCCCE
LLNGVNLLDFEPNERAAKGLFLAFQYPLEIPGVATMTFLKAALNAQRKYRGETELSTPEL
EEECCEEEEECCCCHHHCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH
MKRVNAAASKLGIKSDMMKRALNVGFSGGEKKRMDILQMALLEPSFGILDETDSGLDIDA
HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
LRIVSEGVNALRSPTRGFLVITHYQRLLDYIVPDTVHVMAGGRIVRTGGKELALELEKSG
HHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCEEEEECCEEEECCCCEEEEEECCCC
YAEYLGEEKAA
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]