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The map label for this gene is sufD [C]

Identifier: 182677102

GI number: 182677102

Start: 113704

End: 115038

Strand: Direct

Name: sufD [C]

Synonym: Bind_0100

Alternate gene names: 182677102

Gene position: 113704-115038 (Clockwise)

Preceding gene: 182677101

Following gene: 182677103

Centisome position: 2.73

GC content: 61.57

Gene sequence:

>1335_bases
ATGAGCGCTCAGATCATTCCTTCGAGAACGCCGGCCGAGACCACGCTCGTCGAGAGTTTCGGCGCCGTCAAGGCGACCCT
GCCGGGAACGGCGGATGTCGCCAAGTTGCGGGAAGAAAATTTCGCCGCTTTTGTCGAAGCGGGCTTGCCGCATCGCCGCG
TCGAGTCTTGGCATTATACCGACCTGCGCACGATCATGCGTGAGGCTCTGCCTCTTGCCCCCGTCCCGACGCCGGCCGCA
CTTGAAGGCCTGCGTAAGGATGTTGGCGCGCTGACTCTCCACGGCACCAAACTGGTGCTGGTGGACGGTGCTTTCGTGCC
GGAACTCTCCGACACTGTCCCGGCCGGGGTGACCGTTCACTCCCTTGCCTCGGTTCTGACAAAGGGACCGGCCGAGCTTC
TCACGCTGCTGTCCGGCGAGGGATTGGGCGCGGGCGATGCGATTGTCGCTTTGAATGCCGCCATGATGCAGGACGGGATT
GTCGTCGAAGTCGCGCCTGGCGCGGTGATCGCTGAGCCCTTGAACCTGATCTATGCTACGGCATCCGCGATGCCGGTCGC
GCGTTTCTCGCGCTCGCTCGTCGCTGTCGGTGCCAAAGCCTCCGTGACCATTGCGGAATCGAGCCTCGGCGAAGGTGGCC
GCAGCGGTCAAACCAACGGCTGTCTGATCTTCTCGGTCGGCGATGAAGCCAAGGTCAATCATACGACGCAATTGACCGGC
AGTCTGGCGAACAGCATCCGGATCGACACGTTCATGGTCAGCCTCGGCGCCAAGGTGAAATTCGACAGTTTCGCCTTGGT
CTCTGGAGCGGGCCTGACGCGGCGGCAGATCTTCTTGCGCTTCAATGGCGAAGAGGCGGAAGCTGCTCTGCGGGGTGCCT
CGCTGTTGCGCGGGCGCGAATATGCCGACACCACTTTGTTCGTTGAACATCTTGCGCCGTCTTGCGTCGGTCGCGAATTG
TTCAAATATATCCTCGACGAGGAATCTGTCGGCGTGTTCCAGGGCAAGATTCATGTGGCCCCGGAGGCGCAGCATACGGA
CGGCAAGATGCTCAGCAAGGCCTTGCTGCTGACCGATGGCGTCGCGATGAACAACAAGCCGGAGCTTGAAATCTTCGCCG
ACGATGTCGCCTGCGCGCATGGTGCGACCTGCGGCGGCCTGAGTGAAGAGCAGATCTTCTATCTGCAGGCGCGTGGTCTT
CCCTATAAGGAAGCCGAGGCCTTGCTTCTTGAAGCCTTCGCGGCCGAGCTCGTGGACGAACTCGAAGACGAGAAAGCGGC
TGAAAACTTCCGGAGCGAAATCTCGACCTGGCTCGCGGGACGGACCACGGCCTGA

Upstream 100 bases:

>100_bases
GTGGCAAGGAACTCGCCCTTGAACTCGAGAAAAGCGGCTATGCCGAATATCTCGGTGAAGAAAAGGCCGCGTAAGGATCC
CTGCCGGAAGGAAACCCATT

Downstream 100 bases:

>100_bases
GAAAATCTCAAGCTTCGGAACAGATTGATTGTCCATAAAAAAGACAGTCTGTTTCGGATAAGGCAATCATCAAAAGTGCT
GGCAAGATCCAAGTGATCTT

Product: FeS assembly protein SufD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 443

Protein sequence:

>444_residues
MSAQIIPSRTPAETTLVESFGAVKATLPGTADVAKLREENFAAFVEAGLPHRRVESWHYTDLRTIMREALPLAPVPTPAA
LEGLRKDVGALTLHGTKLVLVDGAFVPELSDTVPAGVTVHSLASVLTKGPAELLTLLSGEGLGAGDAIVALNAAMMQDGI
VVEVAPGAVIAEPLNLIYATASAMPVARFSRSLVAVGAKASVTIAESSLGEGGRSGQTNGCLIFSVGDEAKVNHTTQLTG
SLANSIRIDTFMVSLGAKVKFDSFALVSGAGLTRRQIFLRFNGEEAEAALRGASLLRGREYADTTLFVEHLAPSCVGREL
FKYILDEESVGVFQGKIHVAPEAQHTDGKMLSKALLLTDGVAMNNKPELEIFADDVACAHGATCGGLSEEQIFYLQARGL
PYKEAEALLLEAFAAELVDELEDEKAAENFRSEISTWLAGRTTA

Sequences:

>Translated_444_residues
MSAQIIPSRTPAETTLVESFGAVKATLPGTADVAKLREENFAAFVEAGLPHRRVESWHYTDLRTIMREALPLAPVPTPAA
LEGLRKDVGALTLHGTKLVLVDGAFVPELSDTVPAGVTVHSLASVLTKGPAELLTLLSGEGLGAGDAIVALNAAMMQDGI
VVEVAPGAVIAEPLNLIYATASAMPVARFSRSLVAVGAKASVTIAESSLGEGGRSGQTNGCLIFSVGDEAKVNHTTQLTG
SLANSIRIDTFMVSLGAKVKFDSFALVSGAGLTRRQIFLRFNGEEAEAALRGASLLRGREYADTTLFVEHLAPSCVGREL
FKYILDEESVGVFQGKIHVAPEAQHTDGKMLSKALLLTDGVAMNNKPELEIFADDVACAHGATCGGLSEEQIFYLQARGL
PYKEAEALLLEAFAAELVDELEDEKAAENFRSEISTWLAGRTTA
>Mature_443_residues
SAQIIPSRTPAETTLVESFGAVKATLPGTADVAKLREENFAAFVEAGLPHRRVESWHYTDLRTIMREALPLAPVPTPAAL
EGLRKDVGALTLHGTKLVLVDGAFVPELSDTVPAGVTVHSLASVLTKGPAELLTLLSGEGLGAGDAIVALNAAMMQDGIV
VEVAPGAVIAEPLNLIYATASAMPVARFSRSLVAVGAKASVTIAESSLGEGGRSGQTNGCLIFSVGDEAKVNHTTQLTGS
LANSIRIDTFMVSLGAKVKFDSFALVSGAGLTRRQIFLRFNGEEAEAALRGASLLRGREYADTTLFVEHLAPSCVGRELF
KYILDEESVGVFQGKIHVAPEAQHTDGKMLSKALLLTDGVAMNNKPELEIFADDVACAHGATCGGLSEEQIFYLQARGLP
YKEAEALLLEAFAAELVDELEDEKAAENFRSEISTWLAGRTTA

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=404, Percent_Identity=30.4455445544554, Blast_Score=160, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 46844; Mature: 46713

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAQIIPSRTPAETTLVESFGAVKATLPGTADVAKLREENFAAFVEAGLPHRRVESWHYT
CCCCCCCCCCCCHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCHH
DLRTIMREALPLAPVPTPAALEGLRKDVGALTLHGTKLVLVDGAFVPELSDTVPAGVTVH
HHHHHHHHHCCCCCCCCHHHHHHHHHHHCEEEECCEEEEEECCCCCCCCCCCCCCCHHHH
SLASVLTKGPAELLTLLSGEGLGAGDAIVALNAAMMQDGIVVEVAPGAVIAEPLNLIYAT
HHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHH
ASAMPVARFSRSLVAVGAKASVTIAESSLGEGGRSGQTNGCLIFSVGDEAKVNHTTQLTG
HCCCHHHHHHCHHEEECCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHH
SLANSIRIDTFMVSLGAKVKFDSFALVSGAGLTRRQIFLRFNGEEAEAALRGASLLRGRE
HHHHHEEHEEEEEECCCEEEECCEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHCCCC
YADTTLFVEHLAPSCVGRELFKYILDEESVGVFQGKIHVAPEAQHTDGKMLSKALLLTDG
HHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCC
VAMNNKPELEIFADDVACAHGATCGGLSEEQIFYLQARGLPYKEAEALLLEAFAAELVDE
CCCCCCCCEEEEECCHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHH
LEDEKAAENFRSEISTWLAGRTTA
HHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SAQIIPSRTPAETTLVESFGAVKATLPGTADVAKLREENFAAFVEAGLPHRRVESWHYT
CCCCCCCCCCCHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCHH
DLRTIMREALPLAPVPTPAALEGLRKDVGALTLHGTKLVLVDGAFVPELSDTVPAGVTVH
HHHHHHHHHCCCCCCCCHHHHHHHHHHHCEEEECCEEEEEECCCCCCCCCCCCCCCHHHH
SLASVLTKGPAELLTLLSGEGLGAGDAIVALNAAMMQDGIVVEVAPGAVIAEPLNLIYAT
HHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHH
ASAMPVARFSRSLVAVGAKASVTIAESSLGEGGRSGQTNGCLIFSVGDEAKVNHTTQLTG
HCCCHHHHHHCHHEEECCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHH
SLANSIRIDTFMVSLGAKVKFDSFALVSGAGLTRRQIFLRFNGEEAEAALRGASLLRGRE
HHHHHEEHEEEEEECCCEEEECCEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHCCCC
YADTTLFVEHLAPSCVGRELFKYILDEESVGVFQGKIHVAPEAQHTDGKMLSKALLLTDG
HHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCC
VAMNNKPELEIFADDVACAHGATCGGLSEEQIFYLQARGLPYKEAEALLLEAFAAELVDE
CCCCCCCCEEEEECCHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHH
LEDEKAAENFRSEISTWLAGRTTA
HHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]