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The map label for this gene is sufB [C]

Identifier: 182677100

GI number: 182677100

Start: 111090

End: 112610

Strand: Direct

Name: sufB [C]

Synonym: Bind_0098

Alternate gene names: 182677100

Gene position: 111090-112610 (Clockwise)

Preceding gene: 182677099

Following gene: 182677101

Centisome position: 2.66

GC content: 56.15

Gene sequence:

>1521_bases
ATGGCAGCGGCCAAAGAGACCGTCGATCAGGTCAAGTCGATCGACGTAAGCGAATATAAGTACGGATTCTTTTCCGAGAT
CGAGGCCGACAAGGCTCCGAAGGGCTTGAACGAGGATATCGTTCGCTTCATTTCGGCGAAGAAGAACGAGCCGGCGTGGC
TGACCGAATGGCGCCTTGAGGCTTACCGTCGCTGGCTGACCATGCGCGAACCGGAATGGGCGCGCGTCAATTTCGCCAAG
GTCGATTATCAGGATCTCTATTATTATTCCGCGCCGAAGAGCGCCGCGGGTCCGAAATCCCTCGATGAGGTCGATCCGGA
ACTGCTCAAGGTCTACGAGAAGCTTGGCATTCCGTTGAAGGAACAAGCCGCTCTCGCCGGCGTCGTCGCGGGCGAGAATG
AGATGATCGACGACGAAGGCAATGTCGTGCCGATGCCTGAGCGCAAGATCGCCGTCGATGCGGTCTTTGATTCGGTCTCG
GTCGTCACTACATTCCGCGAAGAACTGGCCAAGGCCGGTGTCATTTTCTGCCCGATTTCGGAAGCGGTGCATACGCATCC
CGAACTGGTGCAGAAATATCTCGGCTCCGTCGTGCCGACGACCGATAATTTCTATGCGACGCTGAACAGCGCCGTGTTCT
CGGATGGCTCCTTCGTCTATATTCCCGAAGGTGTGCGCTGCCCGATGGAATTGTCGACCTATTTTCGTATCAACGAGCAG
AATACGGGACAATTCGAGCGGACCCTGATCATTGCCGACAAGGGTTCCTATGTGTCTTATCTCGAGGGTTGCACGGCGCC
CAAGCGCGATGAGAACCAGCTCCATGCGGCGGTCGTCGAATTGATCGCGTTGGACGATGCCGAAATCAAATATTCGACCG
TGCAGAACTGGTATCCGGGCGATGCCGATGGCAAGGGCGGTATCTATAATTTCGTGACCAAGCGCGGCGATTGCCGTGGC
GCCAATTCGAAAATCTCCTGGACGCAGGTCGAGACGGGCTCGGCTGTGACCTGGAAATATCCGTCCTGCGTGCTGCGTGG
TGATAATTCGCGCGGTGAATTCTATTCGATCGCCATTTCGAATGGCCATCAGCAGGTCGATTCCGGCACCAAAATGATCC
ATCTCGGCAAGAACACGACGAGCCGGGTCATTTCCAAGGGTATTTCTGCGGGTCATTCGCAAAATACTTATCGGGGTCAG
ATCTCTTCGCATCGCAAGGCGACCGGAGCCCGCAACTTCACCAATTGCGACTCGCTGCTGATCGGGAATTCCTGCGGTGC
GCATACAGTGCCTTATCTCGAATCGCGTAATCCCAGCACGCAATTCGAGCATGAGGCGACCACCTCGAAGATCTCCGAGG
ACCAGCTCTTCTATTGCATGCAGCGTGGTCTCTCCGCCGAAGAGGCGACGGCTCTGATCGTCAACGGCTTCGTTCGTGAC
GTTCTGCAACAACTCCCGATGGAGTTTGCCGTCGAGGCGCAAAAGCTGATCGCCGTGTCTCTTGAAGGCAGCGTCGGCTA
A

Upstream 100 bases:

>100_bases
ATCGGGCAATGTCCGGTCACCACTCGGGTTGATCGGGTTCAGGCCCGATCGAAGGGTCTGAACCAGCGGTCCTTGAAACC
GCGAAGGTGAGGAGAAGAGC

Downstream 100 bases:

>100_bases
GACGACCCGCCGAGGTCATGCCTGGACGGATCCCGCTCGATTTCTATCCTGATGGGTTCGTCCAAGCGAATGCTCCTCAC
TCTCTCGGCTCTTGACGTGG

Product: FeS assembly protein SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 506; Mature: 505

Protein sequence:

>506_residues
MAAAKETVDQVKSIDVSEYKYGFFSEIEADKAPKGLNEDIVRFISAKKNEPAWLTEWRLEAYRRWLTMREPEWARVNFAK
VDYQDLYYYSAPKSAAGPKSLDEVDPELLKVYEKLGIPLKEQAALAGVVAGENEMIDDEGNVVPMPERKIAVDAVFDSVS
VVTTFREELAKAGVIFCPISEAVHTHPELVQKYLGSVVPTTDNFYATLNSAVFSDGSFVYIPEGVRCPMELSTYFRINEQ
NTGQFERTLIIADKGSYVSYLEGCTAPKRDENQLHAAVVELIALDDAEIKYSTVQNWYPGDADGKGGIYNFVTKRGDCRG
ANSKISWTQVETGSAVTWKYPSCVLRGDNSRGEFYSIAISNGHQQVDSGTKMIHLGKNTTSRVISKGISAGHSQNTYRGQ
ISSHRKATGARNFTNCDSLLIGNSCGAHTVPYLESRNPSTQFEHEATTSKISEDQLFYCMQRGLSAEEATALIVNGFVRD
VLQQLPMEFAVEAQKLIAVSLEGSVG

Sequences:

>Translated_506_residues
MAAAKETVDQVKSIDVSEYKYGFFSEIEADKAPKGLNEDIVRFISAKKNEPAWLTEWRLEAYRRWLTMREPEWARVNFAK
VDYQDLYYYSAPKSAAGPKSLDEVDPELLKVYEKLGIPLKEQAALAGVVAGENEMIDDEGNVVPMPERKIAVDAVFDSVS
VVTTFREELAKAGVIFCPISEAVHTHPELVQKYLGSVVPTTDNFYATLNSAVFSDGSFVYIPEGVRCPMELSTYFRINEQ
NTGQFERTLIIADKGSYVSYLEGCTAPKRDENQLHAAVVELIALDDAEIKYSTVQNWYPGDADGKGGIYNFVTKRGDCRG
ANSKISWTQVETGSAVTWKYPSCVLRGDNSRGEFYSIAISNGHQQVDSGTKMIHLGKNTTSRVISKGISAGHSQNTYRGQ
ISSHRKATGARNFTNCDSLLIGNSCGAHTVPYLESRNPSTQFEHEATTSKISEDQLFYCMQRGLSAEEATALIVNGFVRD
VLQQLPMEFAVEAQKLIAVSLEGSVG
>Mature_505_residues
AAAKETVDQVKSIDVSEYKYGFFSEIEADKAPKGLNEDIVRFISAKKNEPAWLTEWRLEAYRRWLTMREPEWARVNFAKV
DYQDLYYYSAPKSAAGPKSLDEVDPELLKVYEKLGIPLKEQAALAGVVAGENEMIDDEGNVVPMPERKIAVDAVFDSVSV
VTTFREELAKAGVIFCPISEAVHTHPELVQKYLGSVVPTTDNFYATLNSAVFSDGSFVYIPEGVRCPMELSTYFRINEQN
TGQFERTLIIADKGSYVSYLEGCTAPKRDENQLHAAVVELIALDDAEIKYSTVQNWYPGDADGKGGIYNFVTKRGDCRGA
NSKISWTQVETGSAVTWKYPSCVLRGDNSRGEFYSIAISNGHQQVDSGTKMIHLGKNTTSRVISKGISAGHSQNTYRGQI
SSHRKATGARNFTNCDSLLIGNSCGAHTVPYLESRNPSTQFEHEATTSKISEDQLFYCMQRGLSAEEATALIVNGFVRDV
LQQLPMEFAVEAQKLIAVSLEGSVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=521, Percent_Identity=58.5412667946257, Blast_Score=646, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 56007; Mature: 55876

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAAKETVDQVKSIDVSEYKYGFFSEIEADKAPKGLNEDIVRFISAKKNEPAWLTEWRLE
CCCHHHHHHHHHCCCHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHH
AYRRWLTMREPEWARVNFAKVDYQDLYYYSAPKSAAGPKSLDEVDPELLKVYEKLGIPLK
HHHHHHCCCCCCCCEEEEEEECHHHEEEECCCCCCCCCCCHHHCCHHHHHHHHHHCCCHH
EQAALAGVVAGENEMIDDEGNVVPMPERKIAVDAVFDSVSVVTTFREELAKAGVIFCPIS
HHHHHHEEEECCCCEECCCCCEECCCCCCEEHHHHHHHHHHHHHHHHHHHHCCEEEEECH
EAVHTHPELVQKYLGSVVPTTDNFYATLNSAVFSDGSFVYIPEGVRCPMELSTYFRINEQ
HHHCCCHHHHHHHHCCCCCCCCCHHEEEHHHHCCCCCEEECCCCCCCCEEEEEEEEECCC
NTGQFERTLIIADKGSYVSYLEGCTAPKRDENQLHAAVVELIALDDAEIKYSTVQNWYPG
CCCCEEEEEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHCCCCCC
DADGKGGIYNFVTKRGDCRGANSKISWTQVETGSAVTWKYPSCVLRGDNSRGEFYSIAIS
CCCCCCCEEHHHHCCCCCCCCCCCEEEEEEECCCEEEEECCCEEEECCCCCCCEEEEEEC
NGHQQVDSGTKMIHLGKNTTSRVISKGISAGHSQNTYRGQISSHRKATGARNFTNCDSLL
CCCHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEE
IGNSCGAHTVPYLESRNPSTQFEHEATTSKISEDQLFYCMQRGLSAEEATALIVNGFVRD
ECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
VLQQLPMEFAVEAQKLIAVSLEGSVG
HHHHCCHHHHHCCEEEEEEEECCCCC
>Mature Secondary Structure 
AAAKETVDQVKSIDVSEYKYGFFSEIEADKAPKGLNEDIVRFISAKKNEPAWLTEWRLE
CCHHHHHHHHHCCCHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHH
AYRRWLTMREPEWARVNFAKVDYQDLYYYSAPKSAAGPKSLDEVDPELLKVYEKLGIPLK
HHHHHHCCCCCCCCEEEEEEECHHHEEEECCCCCCCCCCCHHHCCHHHHHHHHHHCCCHH
EQAALAGVVAGENEMIDDEGNVVPMPERKIAVDAVFDSVSVVTTFREELAKAGVIFCPIS
HHHHHHEEEECCCCEECCCCCEECCCCCCEEHHHHHHHHHHHHHHHHHHHHCCEEEEECH
EAVHTHPELVQKYLGSVVPTTDNFYATLNSAVFSDGSFVYIPEGVRCPMELSTYFRINEQ
HHHCCCHHHHHHHHCCCCCCCCCHHEEEHHHHCCCCCEEECCCCCCCCEEEEEEEEECCC
NTGQFERTLIIADKGSYVSYLEGCTAPKRDENQLHAAVVELIALDDAEIKYSTVQNWYPG
CCCCEEEEEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEHHCCCCCC
DADGKGGIYNFVTKRGDCRGANSKISWTQVETGSAVTWKYPSCVLRGDNSRGEFYSIAIS
CCCCCCCEEHHHHCCCCCCCCCCCEEEEEEECCCEEEEECCCEEEECCCCCCCEEEEEEC
NGHQQVDSGTKMIHLGKNTTSRVISKGISAGHSQNTYRGQISSHRKATGARNFTNCDSLL
CCCHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEE
IGNSCGAHTVPYLESRNPSTQFEHEATTSKISEDQLFYCMQRGLSAEEATALIVNGFVRD
ECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
VLQQLPMEFAVEAQKLIAVSLEGSVG
HHHHCCHHHHHCCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]