Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682714
Identifier: 182682714
GI number: 182682714
Start: 2504294
End: 2505055
Strand: Reverse
Name: 182682714
Synonym: XfasM23_2205
Alternate gene names: NA
Gene position: 2505055-2504294 (Counterclockwise)
Preceding gene: 182682716
Following gene: 182682702
Centisome position: 98.79
GC content: 50.0
Gene sequence:
>762_bases ATGCGTAGCGGAAATCCTGCTCTTAAGGAGTCCACGTTCCTTGATCTGGGTACCGGCTCGGTTGTCGTCCGTGACGGAAA CGCAATGACTTTAAACGGTACAGTCAACAAGACTGGGGCCCTGCTGCTGTTAGCGCTGGTTACCTCCGTCTTCGCTTGGA ATCAGTCGCTTGGGGTCGATGGCGTACCTCTGTTAGCGGCACGTGGCTATATGATTGGTGGAGCGATTGGCGGTTTAATA CTGGCGCTGATTACTGCTTTCAAAAAAGAGTGGTCACCAATCACCGCACCAATGTACGCACTCTTAGAGGGCTTTTTCCT CGGTGCAGTCTCGGCAGTGTATGAGGCAAAATTTGGTGGAATTGTGTTCCAGGCCGTGCTACTGACCTTCGGTACATTAA TGGCAATGTTGCTTGCCTATCGTAGTGGTTTGATTAAGGCTACAGAGAATTTCAAGCTCGGTGTCATGGCCGCCACGGGT GGCATCGCTTTACTCTATTTGATCTCCTTCGGATTAAGCTTCTTTGGAATACACATACCAATGATTCATGAAGGAGGTAC TTTCGGTATCGTCTTCAGCCTGTTCGTCGTTGTGATTGCCGCATTGAACCTGGTGTTGGATTTTGACCTCATTGAGCATG GCGTTGAGCAAGGAGCGCCAAAGTACATGGAATGGTATGGCGCATTTGGCCTGATGGTCACGTTGGTGTGGTTGTACCTG GAGTGCTTGCGTTTGCTGTCTAAAATTCAGTCGCGCGACTGA
Upstream 100 bases:
>100_bases TTAATATGCCCACTGTGTTCAGTGTATCCGCTATGCTTACCCATACGTCGTCACCATAGCGGTGGGGGCATATTAGAGAC TTTATTAAGGAGAACAAATT
Downstream 100 bases:
>100_bases GTTGCTACGGTGGTGGTGGGGGCGCACTGCGTGCTTAGCCCCCAGCCCATCCAACAGGGCTAACCACTCTTGCAAAGCCA AGAACATAGATTGCAGACTG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Permease Of Facilitator Superfamily Protein; Membrane Spanning Protein
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MRSGNPALKESTFLDLGTGSVVVRDGNAMTLNGTVNKTGALLLLALVTSVFAWNQSLGVDGVPLLAARGYMIGGAIGGLI LALITAFKKEWSPITAPMYALLEGFFLGAVSAVYEAKFGGIVFQAVLLTFGTLMAMLLAYRSGLIKATENFKLGVMAATG GIALLYLISFGLSFFGIHIPMIHEGGTFGIVFSLFVVVIAALNLVLDFDLIEHGVEQGAPKYMEWYGAFGLMVTLVWLYL ECLRLLSKIQSRD
Sequences:
>Translated_253_residues MRSGNPALKESTFLDLGTGSVVVRDGNAMTLNGTVNKTGALLLLALVTSVFAWNQSLGVDGVPLLAARGYMIGGAIGGLI LALITAFKKEWSPITAPMYALLEGFFLGAVSAVYEAKFGGIVFQAVLLTFGTLMAMLLAYRSGLIKATENFKLGVMAATG GIALLYLISFGLSFFGIHIPMIHEGGTFGIVFSLFVVVIAALNLVLDFDLIEHGVEQGAPKYMEWYGAFGLMVTLVWLYL ECLRLLSKIQSRD >Mature_253_residues MRSGNPALKESTFLDLGTGSVVVRDGNAMTLNGTVNKTGALLLLALVTSVFAWNQSLGVDGVPLLAARGYMIGGAIGGLI LALITAFKKEWSPITAPMYALLEGFFLGAVSAVYEAKFGGIVFQAVLLTFGTLMAMLLAYRSGLIKATENFKLGVMAATG GIALLYLISFGLSFFGIHIPMIHEGGTFGIVFSLFVVVIAALNLVLDFDLIEHGVEQGAPKYMEWYGAFGLMVTLVWLYL ECLRLLSKIQSRD
Specific function: Unknown
COG id: COG4760
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27060; Mature: 27060
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSGNPALKESTFLDLGTGSVVVRDGNAMTLNGTVNKTGALLLLALVTSVFAWNQSLGVD CCCCCCCCCCCCEEEECCCEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCC GVPLLAARGYMIGGAIGGLILALITAFKKEWSPITAPMYALLEGFFLGAVSAVYEAKFGG CCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IVFQAVLLTFGTLMAMLLAYRSGLIKATENFKLGVMAATGGIALLYLISFGLSFFGIHIP HHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHEEE MIHEGGTFGIVFSLFVVVIAALNLVLDFDLIEHGVEQGAPKYMEWYGAFGLMVTLVWLYL EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH ECLRLLSKIQSRD HHHHHHHHHHCCC >Mature Secondary Structure MRSGNPALKESTFLDLGTGSVVVRDGNAMTLNGTVNKTGALLLLALVTSVFAWNQSLGVD CCCCCCCCCCCCEEEECCCEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCC GVPLLAARGYMIGGAIGGLILALITAFKKEWSPITAPMYALLEGFFLGAVSAVYEAKFGG CCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IVFQAVLLTFGTLMAMLLAYRSGLIKATENFKLGVMAATGGIALLYLISFGLSFFGIHIP HHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHEEE MIHEGGTFGIVFSLFVVVIAALNLVLDFDLIEHGVEQGAPKYMEWYGAFGLMVTLVWLYL EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH ECLRLLSKIQSRD HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA