Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682702
Identifier: 182682702
GI number: 182682702
Start: 2492397
End: 2493002
Strand: Reverse
Name: 182682702
Synonym: XfasM23_2193
Alternate gene names: NA
Gene position: 2493002-2492397 (Counterclockwise)
Preceding gene: 182682714
Following gene: 182682701
Centisome position: 98.32
GC content: 57.26
Gene sequence:
>606_bases ATGAAACCCAGAATCCTGATATGTCTTGCTGCATTACTACCGGGGACCGTCTGGTTAACCGGATGCGCCTCTATTGGTGA TCAGATTAAAGATGAATTCTCCTCTTACGCCGAACCTAAAGAGGGCGAACTGGCCCACATCCGCTTGATTGGCTCACGTC AGGTCAAGGTCTACCCCAATAGCACCTGCGTCAATCCAGGCGCACCAGGCAGCGGCTACCCCAACGGTTGGCAGATGTAT GGACAGCGCAAGCGTGATCTGGGGATGCCCAAACTCCCTCAGACCCCGCGGCACTATATCGAGATTGCGGCCCGTGCTGC TCAGCCAATCACCGCTGCATTTTCCTTCCAGACCAGTCTCTTTCCCCAAAAAACACCGTGGAGCAGTGGCGGCAATGTCA TCAACGTCAACCTCTGCAACATTGCATATAGCTTTGTGCCCGTGGCCGGTGCCCATTACGAAGTGGTTGCACGTGAAAAC CGCCGCGTTTGCAGTGTGGACCTCACGCAACTGACCCCCGCAGCGGATGGCACCTGGCATGCGGTGCACGTTCCAGGCCG TGAGGTTGGCCATTGCGGCACCTCCCCCGCAGCGGCTGGACACTAG
Upstream 100 bases:
>100_bases CCATACATTGACTGCGTAAATAAAAAAACTGCATGAGCCAATGATGTGCTTAGTGACCGTCTATAGTGATCACGATATTA AATAATTTAATAGGTGAAAT
Downstream 100 bases:
>100_bases AAACCCAGCAAGCACACACATTTATGCGTGTGCAGCGGCGCGGTGGTGTTTCTGGCGTGTTTGCAGCACCACATGGGCTG CTCAAGGAGTCGGTCGGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MKPRILICLAALLPGTVWLTGCASIGDQIKDEFSSYAEPKEGELAHIRLIGSRQVKVYPNSTCVNPGAPGSGYPNGWQMY GQRKRDLGMPKLPQTPRHYIEIAARAAQPITAAFSFQTSLFPQKTPWSSGGNVINVNLCNIAYSFVPVAGAHYEVVAREN RRVCSVDLTQLTPAADGTWHAVHVPGREVGHCGTSPAAAGH
Sequences:
>Translated_201_residues MKPRILICLAALLPGTVWLTGCASIGDQIKDEFSSYAEPKEGELAHIRLIGSRQVKVYPNSTCVNPGAPGSGYPNGWQMY GQRKRDLGMPKLPQTPRHYIEIAARAAQPITAAFSFQTSLFPQKTPWSSGGNVINVNLCNIAYSFVPVAGAHYEVVAREN RRVCSVDLTQLTPAADGTWHAVHVPGREVGHCGTSPAAAGH >Mature_201_residues MKPRILICLAALLPGTVWLTGCASIGDQIKDEFSSYAEPKEGELAHIRLIGSRQVKVYPNSTCVNPGAPGSGYPNGWQMY GQRKRDLGMPKLPQTPRHYIEIAARAAQPITAAFSFQTSLFPQKTPWSSGGNVINVNLCNIAYSFVPVAGAHYEVVAREN RRVCSVDLTQLTPAADGTWHAVHVPGREVGHCGTSPAAAGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21649; Mature: 21649
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPRILICLAALLPGTVWLTGCASIGDQIKDEFSSYAEPKEGELAHIRLIGSRQVKVYPN CCCHHEEHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEECCC STCVNPGAPGSGYPNGWQMYGQRKRDLGMPKLPQTPRHYIEIAARAAQPITAAFSFQTSL CEECCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEHHCC FPQKTPWSSGGNVINVNLCNIAYSFVPVAGAHYEVVARENRRVCSVDLTQLTPAADGTWH CCCCCCCCCCCCEEEEEEHHEEEEHEECCCCCEEEEECCCCEEEEEEHHHCCCCCCCCEE AVHVPGREVGHCGTSPAAAGH EEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKPRILICLAALLPGTVWLTGCASIGDQIKDEFSSYAEPKEGELAHIRLIGSRQVKVYPN CCCHHEEHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEECCC STCVNPGAPGSGYPNGWQMYGQRKRDLGMPKLPQTPRHYIEIAARAAQPITAAFSFQTSL CEECCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEHHCC FPQKTPWSSGGNVINVNLCNIAYSFVPVAGAHYEVVARENRRVCSVDLTQLTPAADGTWH CCCCCCCCCCCCEEEEEEHHEEEEHEECCCCCEEEEECCCCEEEEEEHHHCCCCCCCCEE AVHVPGREVGHCGTSPAAAGH EEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA