| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182682711
Identifier: 182682711
GI number: 182682711
Start: 2498884
End: 2499762
Strand: Direct
Name: 182682711
Synonym: XfasM23_2202
Alternate gene names: NA
Gene position: 2498884-2499762 (Clockwise)
Preceding gene: 182682710
Following gene: 182682712
Centisome position: 98.55
GC content: 47.55
Gene sequence:
>879_bases ATGAAGATGCCCTGGCGATTATTCATAACTGCAATGTTGTTTGTCGCTCACACCGTGGCTGCGGCGGAGTCTGAATCAGA AGAGGATGAACGGTATTCCTCAGCCACATATGGAGCGGACTGTACCGAGGAGCATTTTTCATCGTTTCTTGAAAGGTTCT CCAATGACGCCAGCATCCAACGAGAACACACCGAATACCAATTGATAAAGAAGGAAATGGATCTGTCCGCGGCACCGGAG GTGAGAAAAATCATCACCTATTTGGGAAGCAATCACATCAAATCACCCGTACTTCCGTTGCGTGCCGTACGGGAGAAACA ATCATTGAAAATGCTTGAAGTGCGGCAACGCTATGTCAATGAAAACCCCAAAGTCATGCTTATTAAACCGAATACGGATG ATGTCACGGTGTACGAATTCGTGCAGAATGGCTGCTGGTATTTGTCATCCATTGATCATCAGGCATCCACTGCGCGCCAT CCACAGCTGTATTGGATGGATGCGATATTCCCCACAATGGATAATTGCACTCCGTATTATTTTTATTTTGACCCACACAC CAAGCGCACTAGCAATGGGGTGTTGGAACGCAAGGGATATACTCCTTATCAGGTTGAAAACTCTGTTGCAAAGTACAAAG TACATGACAAGTTTATGGGCCTGGATGCCACGGAAATCACAATACCCACCAGCCCATACGGCATGTATAAAGTGACGCTG CCGGTCAGCGTAGAACGTCTTACCGCGGCGGTGGAAAAAAACACCGGCCATCGTCTGGCCATTGCGATCCCCGAATTTAA ATCCCAATCCGGAGTGCCCTACCTTGTAGAGGAAGGCAACAACACCTCCAGTTTTGTATGTGCATTTGATGCCCGATAA
Upstream 100 bases:
>100_bases CGGGTGTCCTTGCGGGCACGGTGATTTGCAATACTGACGTTGTTGCTGCGTCGCAAGGTTTATACGTTGCATCCCACCGT ATTTTAAATGGAGTTTAACA
Downstream 100 bases:
>100_bases ATAATGCATCTTGCGGCACGTTGTTTGCACTGTTGGCGTTGTATGCAACCCCGTTCTCAATGGAGTTTAATAATGAAAAT CCCCTGGCGATGCTTCATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MKMPWRLFITAMLFVAHTVAAAESESEEDERYSSATYGADCTEEHFSSFLERFSNDASIQREHTEYQLIKKEMDLSAAPE VRKIITYLGSNHIKSPVLPLRAVREKQSLKMLEVRQRYVNENPKVMLIKPNTDDVTVYEFVQNGCWYLSSIDHQASTARH PQLYWMDAIFPTMDNCTPYYFYFDPHTKRTSNGVLERKGYTPYQVENSVAKYKVHDKFMGLDATEITIPTSPYGMYKVTL PVSVERLTAAVEKNTGHRLAIAIPEFKSQSGVPYLVEEGNNTSSFVCAFDAR
Sequences:
>Translated_292_residues MKMPWRLFITAMLFVAHTVAAAESESEEDERYSSATYGADCTEEHFSSFLERFSNDASIQREHTEYQLIKKEMDLSAAPE VRKIITYLGSNHIKSPVLPLRAVREKQSLKMLEVRQRYVNENPKVMLIKPNTDDVTVYEFVQNGCWYLSSIDHQASTARH PQLYWMDAIFPTMDNCTPYYFYFDPHTKRTSNGVLERKGYTPYQVENSVAKYKVHDKFMGLDATEITIPTSPYGMYKVTL PVSVERLTAAVEKNTGHRLAIAIPEFKSQSGVPYLVEEGNNTSSFVCAFDAR >Mature_292_residues MKMPWRLFITAMLFVAHTVAAAESESEEDERYSSATYGADCTEEHFSSFLERFSNDASIQREHTEYQLIKKEMDLSAAPE VRKIITYLGSNHIKSPVLPLRAVREKQSLKMLEVRQRYVNENPKVMLIKPNTDDVTVYEFVQNGCWYLSSIDHQASTARH PQLYWMDAIFPTMDNCTPYYFYFDPHTKRTSNGVLERKGYTPYQVENSVAKYKVHDKFMGLDATEITIPTSPYGMYKVTL PVSVERLTAAVEKNTGHRLAIAIPEFKSQSGVPYLVEEGNNTSSFVCAFDAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33478; Mature: 33478
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMPWRLFITAMLFVAHTVAAAESESEEDERYSSATYGADCTEEHFSSFLERFSNDASIQ CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHH REHTEYQLIKKEMDLSAAPEVRKIITYLGSNHIKSPVLPLRAVREKQSLKMLEVRQRYVN HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC ENPKVMLIKPNTDDVTVYEFVQNGCWYLSSIDHQASTARHPQLYWMDAIFPTMDNCTPYY CCCCEEEEECCCCCCHHHHHHHCCCEEEECCCCHHHCCCCCEEEEEHHHHCHHCCCCEEE FYFDPHTKRTSNGVLERKGYTPYQVENSVAKYKVHDKFMGLDATEITIPTSPYGMYKVTL EEECCCCCCCCCCCEECCCCCCEEECCCHHEEEEHHHHCCCCCEEEEECCCCCCEEEEEE PVSVERLTAAVEKNTGHRLAIAIPEFKSQSGVPYLVEEGNNTSSFVCAFDAR CCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEECCCCCCEEEEEECCC >Mature Secondary Structure MKMPWRLFITAMLFVAHTVAAAESESEEDERYSSATYGADCTEEHFSSFLERFSNDASIQ CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHH REHTEYQLIKKEMDLSAAPEVRKIITYLGSNHIKSPVLPLRAVREKQSLKMLEVRQRYVN HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC ENPKVMLIKPNTDDVTVYEFVQNGCWYLSSIDHQASTARHPQLYWMDAIFPTMDNCTPYY CCCCEEEEECCCCCCHHHHHHHCCCEEEECCCCHHHCCCCCEEEEEHHHHCHHCCCCEEE FYFDPHTKRTSNGVLERKGYTPYQVENSVAKYKVHDKFMGLDATEITIPTSPYGMYKVTL EEECCCCCCCCCCCEECCCCCCEEECCCHHEEEEHHHHCCCCCEEEEECCCCCCEEEEEE PVSVERLTAAVEKNTGHRLAIAIPEFKSQSGVPYLVEEGNNTSSFVCAFDAR CCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEECCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA