Click here to switch to the map view.

The map label for this gene is frpC [H]

Identifier: 182682710

GI number: 182682710

Start: 2497856

End: 2498653

Strand: Direct

Name: frpC [H]

Synonym: XfasM23_2201

Alternate gene names: 182682710

Gene position: 2497856-2498653 (Clockwise)

Preceding gene: 182682709

Following gene: 182682711

Centisome position: 98.51

GC content: 52.01

Gene sequence:

>798_bases
ATGAATGGATATGAAAGTCTTTATAACCGTTACATGCAAGAGGCTAATAGATACGCAACGTATTACGGACTTGATCCTAG
CACTGCACATAATGGTGAATGGGATGCTTTTCGTCATGCCTACGCCAGTGGAGCGATGACTCGGGAATATGGTGAAACAG
CAGCTCATCTTTTTGGAGATTTGAATGAGATACGCGGCGATTTCATTCATAACCAGCCTGAATATGAAAAGAATATGGAT
AAATGGAATAACTCTGTTGGCCGTAATATTGGGAAGGATTCCGCAAGTAGCGACGAGATTGCACGTCGCGTATACGATGC
AATGAAGCGAGGTCACCTCATTACAGACCCTTGGAATGATACCCGTCGCTATAACGAAAGAAATCAACCGGGGAAAGGAA
ACAACCGTGATGCTCTTGGCGACAGCACCGGCAGCAACAGCCACGGGACAGGGGCTGCGGGTGGCCCAGGGGCAGGTGGT
GCCAGTGTTAGCAAACGGATCACTCCGCTCCCGCCGCGCGATCCGCTGGCGTTGGATTTGGACGGTGACGGGATCGAAAC
GACAGGCAGTGATGGCAGGGTCATTCTGTTCGACCACGATGCCGATGGGGTCAAGACCGGCACCGGTTGGCTGAAGCCGG
ACGATGGTTGGTTGGTGCTGGACCGTAACGGTAACGGGACGATTGACTCCGGGCGCACGCGTGCTGATATCGATACTCTG
AGGCGATTGCATGGACGGAATCGCGGCATTAAGATGCGACGCGAATCACATCACGTCATGATATTGCTCACTCCATAG

Upstream 100 bases:

>100_bases
CAGAACACTTTAAACCAGCTAATTGTGCATCTTTAGAAAATGCGGTAGTCACAAAAATCGAATCAAAAAATAGATTTTTT
TTGATCATGGGAGAAATTGA

Downstream 100 bases:

>100_bases
GCGGCACGTTAACGTTAACCCATCAGTTGCAATGCGGCCCCTGCCCGTTGCCACTGACGGAAAGAAAATAGCTTGAGAAA
AGGGATTTCTCTTCACATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MNGYESLYNRYMQEANRYATYYGLDPSTAHNGEWDAFRHAYASGAMTREYGETAAHLFGDLNEIRGDFIHNQPEYEKNMD
KWNNSVGRNIGKDSASSDEIARRVYDAMKRGHLITDPWNDTRRYNERNQPGKGNNRDALGDSTGSNSHGTGAAGGPGAGG
ASVSKRITPLPPRDPLALDLDGDGIETTGSDGRVILFDHDADGVKTGTGWLKPDDGWLVLDRNGNGTIDSGRTRADIDTL
RRLHGRNRGIKMRRESHHVMILLTP

Sequences:

>Translated_265_residues
MNGYESLYNRYMQEANRYATYYGLDPSTAHNGEWDAFRHAYASGAMTREYGETAAHLFGDLNEIRGDFIHNQPEYEKNMD
KWNNSVGRNIGKDSASSDEIARRVYDAMKRGHLITDPWNDTRRYNERNQPGKGNNRDALGDSTGSNSHGTGAAGGPGAGG
ASVSKRITPLPPRDPLALDLDGDGIETTGSDGRVILFDHDADGVKTGTGWLKPDDGWLVLDRNGNGTIDSGRTRADIDTL
RRLHGRNRGIKMRRESHHVMILLTP
>Mature_265_residues
MNGYESLYNRYMQEANRYATYYGLDPSTAHNGEWDAFRHAYASGAMTREYGETAAHLFGDLNEIRGDFIHNQPEYEKNMD
KWNNSVGRNIGKDSASSDEIARRVYDAMKRGHLITDPWNDTRRYNERNQPGKGNNRDALGDSTGSNSHGTGAAGGPGAGG
ASVSKRITPLPPRDPLALDLDGDGIETTGSDGRVILFDHDADGVKTGTGWLKPDDGWLVLDRNGNGTIDSGRTRADIDTL
RRLHGRNRGIKMRRESHHVMILLTP

Specific function: May participate in the pathogenesis of meningococcal disease [H]

COG id: COG2931

COG function: function code Q; RTX toxins and related Ca2+-binding proteins

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein. Secreted (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 22 hemolysin-type calcium-binding repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010566
- InterPro:   IPR018511
- InterPro:   IPR001343
- InterPro:   IPR003995
- InterPro:   IPR011049 [H]

Pfam domain/function: PF06594 HCBP_related; PF00353 HemolysinCabind [H]

EC number: NA

Molecular weight: Translated: 29318; Mature: 29318

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGYESLYNRYMQEANRYATYYGLDPSTAHNGEWDAFRHAYASGAMTREYGETAAHLFGD
CCHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
LNEIRGDFIHNQPEYEKNMDKWNNSVGRNIGKDSASSDEIARRVYDAMKRGHLITDPWND
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCH
TRRYNERNQPGKGNNRDALGDSTGSNSHGTGAAGGPGAGGASVSKRITPLPPRDPLALDL
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEE
DGDGIETTGSDGRVILFDHDADGVKTGTGWLKPDDGWLVLDRNGNGTIDSGRTRADIDTL
CCCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHH
RRLHGRNRGIKMRRESHHVMILLTP
HHHHCCCCCEEEEECCCCEEEEECC
>Mature Secondary Structure
MNGYESLYNRYMQEANRYATYYGLDPSTAHNGEWDAFRHAYASGAMTREYGETAAHLFGD
CCHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
LNEIRGDFIHNQPEYEKNMDKWNNSVGRNIGKDSASSDEIARRVYDAMKRGHLITDPWND
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCH
TRRYNERNQPGKGNNRDALGDSTGSNSHGTGAAGGPGAGGASVSKRITPLPPRDPLALDL
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEE
DGDGIETTGSDGRVILFDHDADGVKTGTGWLKPDDGWLVLDRNGNGTIDSGRTRADIDTL
CCCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHH
RRLHGRNRGIKMRRESHHVMILLTP
HHHHCCCCCEEEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]