| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182682704
Identifier: 182682704
GI number: 182682704
Start: 2494532
End: 2495425
Strand: Direct
Name: 182682704
Synonym: XfasM23_2195
Alternate gene names: NA
Gene position: 2494532-2495425 (Clockwise)
Preceding gene: 182682703
Following gene: 182682705
Centisome position: 98.38
GC content: 43.29
Gene sequence:
>894_bases ATGAAAATCCCCTGGCGATGCTTCATCACCGCTACCGCGGTGTTGTTTATGGCTCACACCGTGGCTGCTGTGGCCCCTGC CTCCGCAGCAGAGCATGTGCAGGCCGCAGCAAAACCCATGGTGTCGTGCCCTGGAGAAGATTTCACAACGTTTTTTAAAA AATTCTCCAATGATGTAAACATCCAGCGGGCTTTCACCAAGTATCCGCTGAGAATCAAGGAGCTGGATTTGTCGGCTGCA CCAGAAGTGAAAAAAGTAGTCAAGCATTTAAGAAGCGATCAAGTTCACTTCCCTGTGTTTCCTTTAAAGGCAGAAAGGGA GAGGAAATCATTGGATATTATTAATGGCACGGGAAGATATTTAAATGAGAACAGAAAAATTATATTAATCCAACCTAATA CAGATTATTTAATGCTTTACGAATTCGTTAAAAATGACTGCTGGTATTTGTCATCCACCGATAATCGCTCATTCACTGGT GGCCAACAAGAACTACACTGGCTGGATAATATTTATCCATCTATGGATGACTGCACTCCATATCATTTTTATTTCGAAAA AGAATCCAAGCGCACCAGCAATCGCATTTTGGAACGTAAGGGATATTATCCTTATAAGGTCGATGAAGAGGTTGCAAGAT ATAAATTACATGAAAAGTTTATGGGCCTGGATGCCACGGAAATTGCGATCCCATCCAACACATACGCAATTCATATGATC ACGGTACCGGTCAACGTAAAACGTCTTGCGGCGGCGATTAAAAAAACAACCGGGTATCAGTTGGCCATTGCAGCCCCAGG GTTCAATCCTCAATCAGGGGTGGCCTACCTCGTAGAGGAAGGCAAAAACAAATCAAGTTTTGTGTGCATAACGAGTGATG AAGGAGGATTTTAA
Upstream 100 bases:
>100_bases TTTTGTATGTGCATTTGATGCCCGATAAATAATGCATCCTGCGGCACGTTGTTTGCACTGTTGGCGTTGTATGCAACCCC GTTCTCAATGGAGTTTAATA
Downstream 100 bases:
>100_bases TTATGCCTATTTATAACCCTGGTTCCGATTTTCTCCCAGGGTCTGATGATGGCCCTAAAAAATATCTAGGTATTCTATTT CATCCAATTTTAAATGGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MKIPWRCFITATAVLFMAHTVAAVAPASAAEHVQAAAKPMVSCPGEDFTTFFKKFSNDVNIQRAFTKYPLRIKELDLSAA PEVKKVVKHLRSDQVHFPVFPLKAERERKSLDIINGTGRYLNENRKIILIQPNTDYLMLYEFVKNDCWYLSSTDNRSFTG GQQELHWLDNIYPSMDDCTPYHFYFEKESKRTSNRILERKGYYPYKVDEEVARYKLHEKFMGLDATEIAIPSNTYAIHMI TVPVNVKRLAAAIKKTTGYQLAIAAPGFNPQSGVAYLVEEGKNKSSFVCITSDEGGF
Sequences:
>Translated_297_residues MKIPWRCFITATAVLFMAHTVAAVAPASAAEHVQAAAKPMVSCPGEDFTTFFKKFSNDVNIQRAFTKYPLRIKELDLSAA PEVKKVVKHLRSDQVHFPVFPLKAERERKSLDIINGTGRYLNENRKIILIQPNTDYLMLYEFVKNDCWYLSSTDNRSFTG GQQELHWLDNIYPSMDDCTPYHFYFEKESKRTSNRILERKGYYPYKVDEEVARYKLHEKFMGLDATEIAIPSNTYAIHMI TVPVNVKRLAAAIKKTTGYQLAIAAPGFNPQSGVAYLVEEGKNKSSFVCITSDEGGF >Mature_297_residues MKIPWRCFITATAVLFMAHTVAAVAPASAAEHVQAAAKPMVSCPGEDFTTFFKKFSNDVNIQRAFTKYPLRIKELDLSAA PEVKKVVKHLRSDQVHFPVFPLKAERERKSLDIINGTGRYLNENRKIILIQPNTDYLMLYEFVKNDCWYLSSTDNRSFTG GQQELHWLDNIYPSMDDCTPYHFYFEKESKRTSNRILERKGYYPYKVDEEVARYKLHEKFMGLDATEIAIPSNTYAIHMI TVPVNVKRLAAAIKKTTGYQLAIAAPGFNPQSGVAYLVEEGKNKSSFVCITSDEGGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33805; Mature: 33805
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIPWRCFITATAVLFMAHTVAAVAPASAAEHVQAAAKPMVSCPGEDFTTFFKKFSNDVN CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHCCCCHHHHHHHHHHCCCCC IQRAFTKYPLRIKELDLSAAPEVKKVVKHLRSDQVHFPVFPLKAERERKSLDIINGTGRY EEEHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCEECCEECCCCCCCCCCEEEECCCCCE LNENRKIILIQPNTDYLMLYEFVKNDCWYLSSTDNRSFTGGQQELHWLDNIYPSMDDCTP ECCCCEEEEEECCCCEEEEEEHHCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCC YHFYFEKESKRTSNRILERKGYYPYKVDEEVARYKLHEKFMGLDATEIAIPSNTYAIHMI EEEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEE TVPVNVKRLAAAIKKTTGYQLAIAAPGFNPQSGVAYLVEEGKNKSSFVCITSDEGGF EECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECCCCCCEEEEEECCCCCC >Mature Secondary Structure MKIPWRCFITATAVLFMAHTVAAVAPASAAEHVQAAAKPMVSCPGEDFTTFFKKFSNDVN CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHCCCCHHHHHHHHHHCCCCC IQRAFTKYPLRIKELDLSAAPEVKKVVKHLRSDQVHFPVFPLKAERERKSLDIINGTGRY EEEHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCEECCEECCCCCCCCCCEEEECCCCCE LNENRKIILIQPNTDYLMLYEFVKNDCWYLSSTDNRSFTGGQQELHWLDNIYPSMDDCTP ECCCCEEEEEECCCCEEEEEEHHCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCC YHFYFEKESKRTSNRILERKGYYPYKVDEEVARYKLHEKFMGLDATEIAIPSNTYAIHMI EEEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEE TVPVNVKRLAAAIKKTTGYQLAIAAPGFNPQSGVAYLVEEGKNKSSFVCITSDEGGF EECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA