| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182682703
Identifier: 182682703
GI number: 182682703
Start: 2493578
End: 2494459
Strand: Direct
Name: 182682703
Synonym: XfasM23_2194
Alternate gene names: NA
Gene position: 2493578-2494459 (Clockwise)
Preceding gene: 182682697
Following gene: 182682704
Centisome position: 98.34
GC content: 47.51
Gene sequence:
>882_bases ATGAAGATGCCCTGGCGATTATTCATAACTGCAATGTTGCTTGTCGCTCACACCGTGGCTGCGGCGGAGTCTGAATCAGA ACAAGACCGATGGTATACCTCTGCTTTATTGGAATATGCACCTTGTGCCGGGAAAAATTTCTCATCGTTTCTCGACAAGT TCTCCAATGACGCCAGCATCCAGCGGGAATACGCGGAATACCCACTGAGAATCAAGGAACTGGATCTATCCGCCGCGCCG GAAGTGAGAAAAATCATCAAATACTTGAGAAGCAATCAAATCTCCCATCCAGTACTTCCGTTGCGTGCCACACGGGAGAA ACAATCATTGAAAATGCTTGAAGTGCGGCAACGCTATGTCAATGAAAACCGTAAAGCCATCCTTATCAAACCGAATACGG ATGATGTCACGGTGTACGAATTCGTGAAGGATGGCTGCTGGCATTTGTGGTCTATTGATCATCAAGCATCCACTGCGCGC CATCCACAGTTGTATTGGATGGATGCGATATTCCCCGCAATGGATAATTGCACTCCGTATTATTTTTATTTTGACCCACA CACCAAGCGCACTAGCAATGGGGTGTTGGAACGCAAGGGATATACTCCTTATCAGGTTGAAAACTCTGTTGCAAAGTACA AAGTACATGACAAGTTTATGGGCCTGGATGCCACGGAAATCACAATACCCACAAGCCCATACGGCATGTATAAGGTGACG CTGCCAGTCAGCGTAGAACGTCTTACCGCGGCGGTGGAAAAAAACACCGGCCATCGTCTGGCCATTGCGATCCCCGAATT TAAATCTCAATCCGGAGTGCCCTACCTTGTAGAGGAAGGCAACAACACCTCCAGTTTTGTATGTGCATTTGATGCCCGAT AA
Upstream 100 bases:
>100_bases CGGGTGTCCTTGCGGGCACGGTGATTTGCAATACTGACGTTGTTGCTGCGTCGCAAGGTTTATACGTTGCATCCCACCGC GTTTTAAATGGAGTTTAACA
Downstream 100 bases:
>100_bases ATAATGCATCCTGCGGCACGTTGTTTGCACTGTTGGCGTTGTATGCAACCCCGTTCTCAATGGAGTTTAATAATGAAAAT CCCCTGGCGATGCTTCATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MKMPWRLFITAMLLVAHTVAAAESESEQDRWYTSALLEYAPCAGKNFSSFLDKFSNDASIQREYAEYPLRIKELDLSAAP EVRKIIKYLRSNQISHPVLPLRATREKQSLKMLEVRQRYVNENRKAILIKPNTDDVTVYEFVKDGCWHLWSIDHQASTAR HPQLYWMDAIFPAMDNCTPYYFYFDPHTKRTSNGVLERKGYTPYQVENSVAKYKVHDKFMGLDATEITIPTSPYGMYKVT LPVSVERLTAAVEKNTGHRLAIAIPEFKSQSGVPYLVEEGNNTSSFVCAFDAR
Sequences:
>Translated_293_residues MKMPWRLFITAMLLVAHTVAAAESESEQDRWYTSALLEYAPCAGKNFSSFLDKFSNDASIQREYAEYPLRIKELDLSAAP EVRKIIKYLRSNQISHPVLPLRATREKQSLKMLEVRQRYVNENRKAILIKPNTDDVTVYEFVKDGCWHLWSIDHQASTAR HPQLYWMDAIFPAMDNCTPYYFYFDPHTKRTSNGVLERKGYTPYQVENSVAKYKVHDKFMGLDATEITIPTSPYGMYKVT LPVSVERLTAAVEKNTGHRLAIAIPEFKSQSGVPYLVEEGNNTSSFVCAFDAR >Mature_293_residues MKMPWRLFITAMLLVAHTVAAAESESEQDRWYTSALLEYAPCAGKNFSSFLDKFSNDASIQREYAEYPLRIKELDLSAAP EVRKIIKYLRSNQISHPVLPLRATREKQSLKMLEVRQRYVNENRKAILIKPNTDDVTVYEFVKDGCWHLWSIDHQASTAR HPQLYWMDAIFPAMDNCTPYYFYFDPHTKRTSNGVLERKGYTPYQVENSVAKYKVHDKFMGLDATEITIPTSPYGMYKVT LPVSVERLTAAVEKNTGHRLAIAIPEFKSQSGVPYLVEEGNNTSSFVCAFDAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33686; Mature: 33686
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMPWRLFITAMLLVAHTVAAAESESEQDRWYTSALLEYAPCAGKNFSSFLDKFSNDASI CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHH QREYAEYPLRIKELDLSAAPEVRKIIKYLRSNQISHPVLPLRATREKQSLKMLEVRQRYV HHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH NENRKAILIKPNTDDVTVYEFVKDGCWHLWSIDHQASTARHPQLYWMDAIFPAMDNCTPY CCCCEEEEEECCCCCEEHHHHHHCCCEEEEECCCCCCCCCCCEEEEHHHHHHHHHCCCEE YFYFDPHTKRTSNGVLERKGYTPYQVENSVAKYKVHDKFMGLDATEITIPTSPYGMYKVT EEEECCCCCCCCCCCEECCCCCCEEECCCHHEEEEHHHHCCCCCEEEEECCCCCCEEEEE LPVSVERLTAAVEKNTGHRLAIAIPEFKSQSGVPYLVEEGNNTSSFVCAFDAR ECCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEECCCCCCEEEEEECCC >Mature Secondary Structure MKMPWRLFITAMLLVAHTVAAAESESEQDRWYTSALLEYAPCAGKNFSSFLDKFSNDASI CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHH QREYAEYPLRIKELDLSAAPEVRKIIKYLRSNQISHPVLPLRATREKQSLKMLEVRQRYV HHHHHHCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH NENRKAILIKPNTDDVTVYEFVKDGCWHLWSIDHQASTARHPQLYWMDAIFPAMDNCTPY CCCCEEEEEECCCCCEEHHHHHHCCCEEEEECCCCCCCCCCCEEEEHHHHHHHHHCCCEE YFYFDPHTKRTSNGVLERKGYTPYQVENSVAKYKVHDKFMGLDATEITIPTSPYGMYKVT EEEECCCCCCCCCCCEECCCCCCEEECCCHHEEEEHHHHCCCCCEEEEECCCCCCEEEEE LPVSVERLTAAVEKNTGHRLAIAIPEFKSQSGVPYLVEEGNNTSSFVCAFDAR ECCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEECCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA