Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682701
Identifier: 182682701
GI number: 182682701
Start: 2491644
End: 2492099
Strand: Reverse
Name: 182682701
Synonym: XfasM23_2192
Alternate gene names: NA
Gene position: 2492099-2491644 (Counterclockwise)
Preceding gene: 182682702
Following gene: 182682700
Centisome position: 98.28
GC content: 54.39
Gene sequence:
>456_bases ATGCTCCGTACTACCCCACATCCCCACATCCCCATATCCCCATATCCCCATATCCCCATATCCCCATATCCCCATATCCC CATATCCCCATATCCCCATATCCCCATATCCGCAGCGCAGCAACGCAACGGCGTACTGAATGGCGCTGCCGATGCGGTGC TGTCCTGCATAGTGAACGTGTGTATTGGCCTTTTCTTAGAGGCTTTGATGAAAAAGGCCGCGTCCAGTCTTCCCACCTAC CTGTCCCCTGCGGGGCGTGGCCCTTCCAAGTGCTGCCGCCTACTGATTTCGTCAACTCCATCCGAAGCGATATATCGCAT GGCCACCCATACAGCCTTGATGCTTTTATTAACCATAAAGAATGTGATGAAATGCGCGGTATTTCCGCATTGCTGCGGCT CCCCCTTCAGAACCAACGCCGGTTTTTCAGCCAGGCCAAATCGCGACCCTGCCTAG
Upstream 100 bases:
>100_bases GCAGTGGCGTGTCACCTGAGTTGCTGTTGATCCCGGGTGCGTAGCGGCAACACAGATCGCAGCGCCAGCATCAAACCAGC GGCCCAACAATCTTCCTGCA
Downstream 100 bases:
>100_bases CGCAGCCAACACAGCACAGACCAAAGATCGATATTGGCTGTGCAGCACATCAACAAGGTATTCACACACTCAAGGAGACT GTAATGACATTAAATCTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MLRTTPHPHIPISPYPHIPISPYPHIPISPYPHIPISAAQQRNGVLNGAADAVLSCIVNVCIGLFLEALMKKAASSLPTY LSPAGRGPSKCCRLLISSTPSEAIYRMATHTALMLLLTIKNVMKCAVFPHCCGSPFRTNAGFSARPNRDPA
Sequences:
>Translated_151_residues MLRTTPHPHIPISPYPHIPISPYPHIPISPYPHIPISAAQQRNGVLNGAADAVLSCIVNVCIGLFLEALMKKAASSLPTY LSPAGRGPSKCCRLLISSTPSEAIYRMATHTALMLLLTIKNVMKCAVFPHCCGSPFRTNAGFSARPNRDPA >Mature_151_residues MLRTTPHPHIPISPYPHIPISPYPHIPISPYPHIPISAAQQRNGVLNGAADAVLSCIVNVCIGLFLEALMKKAASSLPTY LSPAGRGPSKCCRLLISSTPSEAIYRMATHTALMLLLTIKNVMKCAVFPHCCGSPFRTNAGFSARPNRDPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16237; Mature: 16237
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRTTPHPHIPISPYPHIPISPYPHIPISPYPHIPISAAQQRNGVLNGAADAVLSCIVNV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHH CIGLFLEALMKKAASSLPTYLSPAGRGPSKCCRLLISSTPSEAIYRMATHTALMLLLTIK HHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH NVMKCAVFPHCCGSPFRTNAGFSARPNRDPA HHHHHHHCHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLRTTPHPHIPISPYPHIPISPYPHIPISPYPHIPISAAQQRNGVLNGAADAVLSCIVNV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHH CIGLFLEALMKKAASSLPTYLSPAGRGPSKCCRLLISSTPSEAIYRMATHTALMLLLTIK HHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH NVMKCAVFPHCCGSPFRTNAGFSARPNRDPA HHHHHHHCHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA