Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682699
Identifier: 182682699
GI number: 182682699
Start: 2489101
End: 2489994
Strand: Reverse
Name: 182682699
Synonym: XfasM23_2190
Alternate gene names: NA
Gene position: 2489994-2489101 (Counterclockwise)
Preceding gene: 182682700
Following gene: 182682698
Centisome position: 98.2
GC content: 53.24
Gene sequence:
>894_bases ATGAAATTGCGAATCCCACTGTGTGTATCAATCTGTGTTGCCGGCCTACTGTTGTCGGCTTGCAGCACCGCTCCTGTGAT CGACTCGGATACCGGCAAGCCGATCATGATGGCCGGACCTAAGGAGAGCCGCGATCTGACCCTGGAACAATTTCAGGTGA ATTTTTTAGATCAGTACACCATCAAGCATGCCTTTATCAATGGCGTCAACATCTACCGCTGTTATCCAGGCGCACCGCCC AACAATGTGCAGATGGTGATGCAACGCAGTCATGGAACAGAGGTCCCGGGAATCATGGTTAACCTGGAAGGTCAACAGCC GACGGTTGTTCCACTGGATGCCTCTATCATCGGTGCCAAGAAGCTGACTCCCACCACCACGCGCCCTTTGCATAACGTCA GGGTGTTGAGAGTGAATGCGGTGATGAGATTTCATCCGCTGTGCAGGGCGCGGTTTGTGGGACCCAACGACATCAGTTTC GGCATCCGCAGCGCCACCAGCCAAAGTATCCAGGAGCATATTCAGGAACTAACGGATCTGATGAAAAAAACTCAGCAAGC CGATGAGCAAGCCATGGGTGCGCTCTATAGCCGCAGTAGTGCCCTCGTATCCAAACTTAAAATGAGTGGGGCCACATCCA ACGTTGCTTTTCTGGAGGTCCCACAGACCGAGACGCGCTGGGGTAATCCCTGGACCTGGTACCGCGCGTATCTTCCGACC CCGCTGGGTGATGGCGTGGAAACCTGGATGACCCCGATCGGCGATAGCGGCTACTACATCACGGTGGATTTCAACTTTAC TGAGTCAGAACGTCAAAAAAACACCGAGAATTACCAGCGTGCCCGTCAATTGATGGACAGCGTGTTGCAATCAGTGGTCA TTCAAAAGCGGTGA
Upstream 100 bases:
>100_bases GGCCTCACCACCAACCGATCCGGCATTCTCAGCAACACCGATAACAGGGATGTAGGCAAAGATGTGCCAACCATTGACCC CAACGTAAGGAGACACTGTT
Downstream 100 bases:
>100_bases GCGCTGTCCAGCAGCAGTGTCCCCCGACAATGGTTGCCGCCGGATTGCGATTGCCTCGCATGCGCGCGTGTTGCAAACAC TGACCACACGCGGCAATCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MKLRIPLCVSICVAGLLLSACSTAPVIDSDTGKPIMMAGPKESRDLTLEQFQVNFLDQYTIKHAFINGVNIYRCYPGAPP NNVQMVMQRSHGTEVPGIMVNLEGQQPTVVPLDASIIGAKKLTPTTTRPLHNVRVLRVNAVMRFHPLCRARFVGPNDISF GIRSATSQSIQEHIQELTDLMKKTQQADEQAMGALYSRSSALVSKLKMSGATSNVAFLEVPQTETRWGNPWTWYRAYLPT PLGDGVETWMTPIGDSGYYITVDFNFTESERQKNTENYQRARQLMDSVLQSVVIQKR
Sequences:
>Translated_297_residues MKLRIPLCVSICVAGLLLSACSTAPVIDSDTGKPIMMAGPKESRDLTLEQFQVNFLDQYTIKHAFINGVNIYRCYPGAPP NNVQMVMQRSHGTEVPGIMVNLEGQQPTVVPLDASIIGAKKLTPTTTRPLHNVRVLRVNAVMRFHPLCRARFVGPNDISF GIRSATSQSIQEHIQELTDLMKKTQQADEQAMGALYSRSSALVSKLKMSGATSNVAFLEVPQTETRWGNPWTWYRAYLPT PLGDGVETWMTPIGDSGYYITVDFNFTESERQKNTENYQRARQLMDSVLQSVVIQKR >Mature_297_residues MKLRIPLCVSICVAGLLLSACSTAPVIDSDTGKPIMMAGPKESRDLTLEQFQVNFLDQYTIKHAFINGVNIYRCYPGAPP NNVQMVMQRSHGTEVPGIMVNLEGQQPTVVPLDASIIGAKKLTPTTTRPLHNVRVLRVNAVMRFHPLCRARFVGPNDISF GIRSATSQSIQEHIQELTDLMKKTQQADEQAMGALYSRSSALVSKLKMSGATSNVAFLEVPQTETRWGNPWTWYRAYLPT PLGDGVETWMTPIGDSGYYITVDFNFTESERQKNTENYQRARQLMDSVLQSVVIQKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33169; Mature: 33169
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRIPLCVSICVAGLLLSACSTAPVIDSDTGKPIMMAGPKESRDLTLEQFQVNFLDQYT CEEECHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHH IKHAFINGVNIYRCYPGAPPNNVQMVMQRSHGTEVPGIMVNLEGQQPTVVPLDASIIGAK HHHHHHCCEEEEEECCCCCCCCHHHHEECCCCCCCCEEEEEECCCCCEEEEECCCEECCC KLTPTTTRPLHNVRVLRVNAVMRFHPLCRARFVGPNDISFGIRSATSQSIQEHIQELTDL CCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH MKKTQQADEQAMGALYSRSSALVSKLKMSGATSNVAFLEVPQTETRWGNPWTWYRAYLPT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEECCC PLGDGVETWMTPIGDSGYYITVDFNFTESERQKNTENYQRARQLMDSVLQSVVIQKR CCCCCHHHHHCCCCCCCEEEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKLRIPLCVSICVAGLLLSACSTAPVIDSDTGKPIMMAGPKESRDLTLEQFQVNFLDQYT CEEECHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHH IKHAFINGVNIYRCYPGAPPNNVQMVMQRSHGTEVPGIMVNLEGQQPTVVPLDASIIGAK HHHHHHCCEEEEEECCCCCCCCHHHHEECCCCCCCCEEEEEECCCCCEEEEECCCEECCC KLTPTTTRPLHNVRVLRVNAVMRFHPLCRARFVGPNDISFGIRSATSQSIQEHIQELTDL CCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH MKKTQQADEQAMGALYSRSSALVSKLKMSGATSNVAFLEVPQTETRWGNPWTWYRAYLPT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEECCC PLGDGVETWMTPIGDSGYYITVDFNFTESERQKNTENYQRARQLMDSVLQSVVIQKR CCCCCHHHHHCCCCCCCEEEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA