Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682698
Identifier: 182682698
GI number: 182682698
Start: 2488718
End: 2488972
Strand: Reverse
Name: 182682698
Synonym: XfasM23_2189
Alternate gene names: NA
Gene position: 2488972-2488718 (Counterclockwise)
Preceding gene: 182682699
Following gene: 182682693
Centisome position: 98.16
GC content: 59.61
Gene sequence:
>255_bases ATGCTGCCGGATGGCGATGCCCGGTCGGTTCGATTTAGAGACGCTCAGAGCAACGTGTTCGAGCTGCTCGGGTCGTTCAA GGGTGAAGCTATGACGGTGGATCGCATCATGCAACACGCCGGTTTGGACAGCATCAAGCCGAGCGACCTGCTTAAGACCA AGGGCCTGCCAGAATCGCAAGACGCTGCCTACGGCGCACTCGTGGTTATGCTGCAACGCGTGGCCCTGTCTAGGATGCGA TGCCGTGTGCGCTGA
Upstream 100 bases:
>100_bases AATGGTTGCCGCCGGATTGCGATTGCCTCGCATGCGCGCGTGTTGCAAACACTGACCACACGCGGCAATCCGCTGTTTTT CGCGCACTTCAAATTAGGTG
Downstream 100 bases:
>100_bases GTGCGTTCGTTATCCCTTCACAGATATTGAGCAAGCTTATTGGCACCCTCACAGGTGGTTGATGAACAACACTGGCTACG TGTGCTGCGCTGAAGCAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 84; Mature: 84
Protein sequence:
>84_residues MLPDGDARSVRFRDAQSNVFELLGSFKGEAMTVDRIMQHAGLDSIKPSDLLKTKGLPESQDAAYGALVVMLQRVALSRMR CRVR
Sequences:
>Translated_84_residues MLPDGDARSVRFRDAQSNVFELLGSFKGEAMTVDRIMQHAGLDSIKPSDLLKTKGLPESQDAAYGALVVMLQRVALSRMR CRVR >Mature_84_residues MLPDGDARSVRFRDAQSNVFELLGSFKGEAMTVDRIMQHAGLDSIKPSDLLKTKGLPESQDAAYGALVVMLQRVALSRMR CRVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9323; Mature: 9323
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPDGDARSVRFRDAQSNVFELLGSFKGEAMTVDRIMQHAGLDSIKPSDLLKTKGLPESQ CCCCCCCCCEECCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHCCCCCCC DAAYGALVVMLQRVALSRMRCRVR HHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLPDGDARSVRFRDAQSNVFELLGSFKGEAMTVDRIMQHAGLDSIKPSDLLKTKGLPESQ CCCCCCCCCEECCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHCCCCCCC DAAYGALVVMLQRVALSRMRCRVR HHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA