| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is egl [H]
Identifier: 182682674
GI number: 182682674
Start: 2448285
End: 2449355
Strand: Direct
Name: egl [H]
Synonym: XfasM23_2164
Alternate gene names: 182682674
Gene position: 2448285-2449355 (Clockwise)
Preceding gene: 182682672
Following gene: 182682677
Centisome position: 96.55
GC content: 49.86
Gene sequence:
>1071_bases ATGCCCATTTCCTTTCTATACCCTTTATGCCTCCTCCCCTCCTGTTTCCTAATACTGCTCACAAGCTTGACGACACTGGC ACCAACATCACCAAGCCATACCACAAACATACTGACGTACGCTGGTATCAATCTTCCTGGCCCGGAATTCAGCCCAAGCA ATAAACCAGGTGTTCTCTATAAGGACTATCTTTATCCAAGTGCATCTGACTACGCTTACGTGGCCAAAAAGGGCATGAAC ATCGTGCGCCTCCCTGTCCTTTGGGAACGCGTTCAGCCCACACTGAATGATGCATTGGACGCCACGCAACTCAACCTGAT TCTTAACGCCGTCGAGCAAGCGAAAGCACAGAAATTACATATCATTCTAGATATCCATAACTACGCCAAATATAACGATG AGCTGATCGGCAGTGACAATGTTCCTATCAGCGCCTTCGCCGATCTATGGAAGCGTCTGTCCCTACAGTTTTCCAACGAC AAAGCAGTCATCTTCGGGCTGATGAACGAGCCTCATGAAATCACCTCAACCACTTGGGCTAAGGCTGCTCAAGCAGCCAT CAACGCAATCCGCAGCACTGGCGCACGTAACCTTGTATTAGTGCCGGGTACCGCTTACAGCGGCGCACACAGTTGGCTGA GCAGCTACTACGGCATCCCTAATGGAGAAGCGCTGCTGAACATCAATGATCCTGCCAAACACATGGCGTTCGAAGTACAC CAATATCTCAATGAAAATAGCACCGGCACGACGGGCGAATGCATCAGCACCACCATCGGAGCCGAGAAGCTAGAAGCATT CACCAACTGGCTGCGCACCTACCATAAAACCGGTTTCCTTGGCGAGTTCGCTACTGGCAACAACGATACTTGCAACCAAG CATTGGAAGGCATGCTCAGCTATATTGAGGAAAACGCAGACGTCTGGTTGGGACTGACGTGGTGGGGATCTAACCCCTGG TTTAGTCCCAATTATCCATTCAACCTGCATCCAAACAGTGACGGCAACGACAAGCCGCAGATGAGCATCCTGGAATCACA CACACGTAAGATCACTAAAATCCACAAATAA
Upstream 100 bases:
>100_bases TGAAAATATACGATGGCTATGATTTCGTACGCACCTCTCAGAGACTGAGATACCACTCACGGCTGAACATACCCACACAC AACACACGAAAAATATCTCT
Downstream 100 bases:
>100_bases TCGTAAAAAACACACCAGACGCAATAAAAACGTGATCGAGTGAGCAACCAAGGATGTTGGGAAACAAGGCCTTTTCACCC ACAACGCCCCCTCTCCACTG
Product: cellulase
Products: NA
Alternate protein names: Cellulase; Endo-1,4-beta-glucanase [H]
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MPISFLYPLCLLPSCFLILLTSLTTLAPTSPSHTTNILTYAGINLPGPEFSPSNKPGVLYKDYLYPSASDYAYVAKKGMN IVRLPVLWERVQPTLNDALDATQLNLILNAVEQAKAQKLHIILDIHNYAKYNDELIGSDNVPISAFADLWKRLSLQFSND KAVIFGLMNEPHEITSTTWAKAAQAAINAIRSTGARNLVLVPGTAYSGAHSWLSSYYGIPNGEALLNINDPAKHMAFEVH QYLNENSTGTTGECISTTIGAEKLEAFTNWLRTYHKTGFLGEFATGNNDTCNQALEGMLSYIEENADVWLGLTWWGSNPW FSPNYPFNLHPNSDGNDKPQMSILESHTRKITKIHK
Sequences:
>Translated_356_residues MPISFLYPLCLLPSCFLILLTSLTTLAPTSPSHTTNILTYAGINLPGPEFSPSNKPGVLYKDYLYPSASDYAYVAKKGMN IVRLPVLWERVQPTLNDALDATQLNLILNAVEQAKAQKLHIILDIHNYAKYNDELIGSDNVPISAFADLWKRLSLQFSND KAVIFGLMNEPHEITSTTWAKAAQAAINAIRSTGARNLVLVPGTAYSGAHSWLSSYYGIPNGEALLNINDPAKHMAFEVH QYLNENSTGTTGECISTTIGAEKLEAFTNWLRTYHKTGFLGEFATGNNDTCNQALEGMLSYIEENADVWLGLTWWGSNPW FSPNYPFNLHPNSDGNDKPQMSILESHTRKITKIHK >Mature_355_residues PISFLYPLCLLPSCFLILLTSLTTLAPTSPSHTTNILTYAGINLPGPEFSPSNKPGVLYKDYLYPSASDYAYVAKKGMNI VRLPVLWERVQPTLNDALDATQLNLILNAVEQAKAQKLHIILDIHNYAKYNDELIGSDNVPISAFADLWKRLSLQFSNDK AVIFGLMNEPHEITSTTWAKAAQAAINAIRSTGARNLVLVPGTAYSGAHSWLSSYYGIPNGEALLNINDPAKHMAFEVHQ YLNENSTGTTGECISTTIGAEKLEAFTNWLRTYHKTGFLGEFATGNNDTCNQALEGMLSYIEENADVWLGLTWWGSNPWF SPNYPFNLHPNSDGNDKPQMSILESHTRKITKIHK
Specific function: Unknown
COG id: COG2730
COG function: function code G; Endoglucanase
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 5 (cellulase A) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001547 - InterPro: IPR018087 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00150 Cellulase [H]
EC number: =3.2.1.4 [H]
Molecular weight: Translated: 39484; Mature: 39353
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: PS00659 GLYCOSYL_HYDROL_F5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPISFLYPLCLLPSCFLILLTSLTTLAPTSPSHTTNILTYAGINLPGPEFSPSNKPGVLY CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEE KDYLYPSASDYAYVAKKGMNIVRLPVLWERVQPTLNDALDATQLNLILNAVEQAKAQKLH ECCCCCCCCCHHHHHHCCCCEEEHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCEEE IILDIHNYAKYNDELIGSDNVPISAFADLWKRLSLQFSNDKAVIFGLMNEPHEITSTTWA EEEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHCEEECCCCEEEEEECCCCHHHHHHHHH KAAQAAINAIRSTGARNLVLVPGTAYSGAHSWLSSYYGIPNGEALLNINDPAKHMAFEVH HHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHH QYLNENSTGTTGECISTTIGAEKLEAFTNWLRTYHKTGFLGEFATGNNDTCNQALEGMLS HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHH YIEENADVWLGLTWWGSNPWFSPNYPFNLHPNSDGNDKPQMSILESHTRKITKIHK HHHCCCCEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure PISFLYPLCLLPSCFLILLTSLTTLAPTSPSHTTNILTYAGINLPGPEFSPSNKPGVLY CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEE KDYLYPSASDYAYVAKKGMNIVRLPVLWERVQPTLNDALDATQLNLILNAVEQAKAQKLH ECCCCCCCCCHHHHHHCCCCEEEHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCEEE IILDIHNYAKYNDELIGSDNVPISAFADLWKRLSLQFSNDKAVIFGLMNEPHEITSTTWA EEEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHCEEECCCCEEEEEECCCCHHHHHHHHH KAAQAAINAIRSTGARNLVLVPGTAYSGAHSWLSSYYGIPNGEALLNINDPAKHMAFEVH HHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHH QYLNENSTGTTGECISTTIGAEKLEAFTNWLRTYHKTGFLGEFATGNNDTCNQALEGMLS HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHH YIEENADVWLGLTWWGSNPWFSPNYPFNLHPNSDGNDKPQMSILESHTRKITKIHK HHHCCCCEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1735723; 2738021; 2195024 [H]