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The map label for this gene is yibP [H]

Identifier: 182682671

GI number: 182682671

Start: 2444673

End: 2445983

Strand: Reverse

Name: yibP [H]

Synonym: XfasM23_2161

Alternate gene names: 182682671

Gene position: 2445983-2444673 (Counterclockwise)

Preceding gene: 182682673

Following gene: 182682670

Centisome position: 96.46

GC content: 54.54

Gene sequence:

>1311_bases
ATGTTTGGCTACAATTCGCATCTGTGTTGTAGTCATTGGATTGTCCGTTTGTTGTCTTATCGTTCCGTCCTTGTGCGTCT
GTTTCCATTTTGTCTCCAGTGCGCCTTGGCATTGGTGGTCGGTGCGGTGCTGGCTGAGTCTGCCGTCGCACAGAATCAGA
GTGAGACCGAGCGTAAGTTGGCTAGGACACGTAGCGAATTAAATGATGTGGCCAAGCAACGGCAGCAGTTGGAGAGTCAA
CGCGGTGATGCGACCCGGCGTTTGCGTCAGGTTGATGAGCAGGTCGCGCGCTCTGCACGTGATCTTAGTCGGATTGAGGA
TAAGTTGCGTGAGCAGGAGCAGGCGCTGATCCAAGCCCAAGGGCAACGTGAACAGATGCAGCAGGGATTGGAGGAGCAAC
GTCGTCAGCTTGCGGTCTTGCTGCGTGTTGTGTATCAAGTGGGTGACAGTGTGCCGCTCAAGTTGTTGTTATCTCAGGAT
AGTGTGGCGGATGCGAATCGGTTAGTGATCTACCATCGATATCTGCAGCGCGCGCGTGCCGAGCGTATTAGGGCGTTGAC
TCAGGAGTTGCAGGGCTTGGTTGCGTTGGAGCAGCGTATCGCTGTTCAGCGTCAGACTTTGGAGCAGACACGCCTTCAGC
AGGTTGGACAGGCTTCCATCCTCAAGCAGGATCGGCAAAAGCAGGCTAAGACGGTGGCTGAATTGGATACTCGCTATCAG
GAGCGTAGTAAACGCGAAAAAGTGTTGGGGCAGAATGCCAAAGCATTGGAGCAAGTGCTTGCCAGCCTACGTGCGGCGGC
AGCGCGCGCTGAGGCTGAGCGCCGCGAAGCGGCCCGGCGTTCCGCTGCTCAGGCTGAGTTAGAAGCCAAGAGCGGTCATG
TGCCCGCTAAGATGCCGCCTAAGGGGACGACTAACGTCACTGGACCCAAGGTGGGGGGGCTGAGTTGGCCGGTGACGGGT
AACTTATTAGCATCCTACGGTGGGGCATTGCCGGATGGGAGGATCAGCAAGGGGGTATTAATCGCTGCTCCTGCCGGAAA
CAATGTGGTGGCAGTTGCCGATGGCATGGTGGTATTTGCTGAATGGATGACTGGTTACGGAATGATTTTGATTGTCGATC
ATGGCAACGGTTACATGAGTTTGTATGCAAACAATGACACGTTGTTGCGTAATCCAGGGACGTATGTGAAACGTGGTGAA
TTGGTTGCCAAGGTTGGTAGGTCGGGAGGGCAGGGAGTGTCTGCTCTATATTTTGAGTTGCGCCACAATGGTCAGCCGAT
CAATCCTTTGAGTTGGTTGCAAAAGCACTGA

Upstream 100 bases:

>100_bases
CATTTGGTATCGATCAAGTTGTATTGGTTAGGTCTACGTCCGATTGCACGTTCATAAATCTTCGGTGTGTGTTGTCGTTT
TCTTGTCAGGTAATCTGAGG

Downstream 100 bases:

>100_bases
AGGCGGTGTGTGATTCCGTAGAGGTATCTGTCACGAATCTATGATCGTTATTTGCTGATTCGGCGGCCATTCAATCTGTA
TTGTCTGTTGCTTCCCGCAT

Product: peptidase M23

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MFGYNSHLCCSHWIVRLLSYRSVLVRLFPFCLQCALALVVGAVLAESAVAQNQSETERKLARTRSELNDVAKQRQQLESQ
RGDATRRLRQVDEQVARSARDLSRIEDKLREQEQALIQAQGQREQMQQGLEEQRRQLAVLLRVVYQVGDSVPLKLLLSQD
SVADANRLVIYHRYLQRARAERIRALTQELQGLVALEQRIAVQRQTLEQTRLQQVGQASILKQDRQKQAKTVAELDTRYQ
ERSKREKVLGQNAKALEQVLASLRAAAARAEAERREAARRSAAQAELEAKSGHVPAKMPPKGTTNVTGPKVGGLSWPVTG
NLLASYGGALPDGRISKGVLIAAPAGNNVVAVADGMVVFAEWMTGYGMILIVDHGNGYMSLYANNDTLLRNPGTYVKRGE
LVAKVGRSGGQGVSALYFELRHNGQPINPLSWLQKH

Sequences:

>Translated_436_residues
MFGYNSHLCCSHWIVRLLSYRSVLVRLFPFCLQCALALVVGAVLAESAVAQNQSETERKLARTRSELNDVAKQRQQLESQ
RGDATRRLRQVDEQVARSARDLSRIEDKLREQEQALIQAQGQREQMQQGLEEQRRQLAVLLRVVYQVGDSVPLKLLLSQD
SVADANRLVIYHRYLQRARAERIRALTQELQGLVALEQRIAVQRQTLEQTRLQQVGQASILKQDRQKQAKTVAELDTRYQ
ERSKREKVLGQNAKALEQVLASLRAAAARAEAERREAARRSAAQAELEAKSGHVPAKMPPKGTTNVTGPKVGGLSWPVTG
NLLASYGGALPDGRISKGVLIAAPAGNNVVAVADGMVVFAEWMTGYGMILIVDHGNGYMSLYANNDTLLRNPGTYVKRGE
LVAKVGRSGGQGVSALYFELRHNGQPINPLSWLQKH
>Mature_436_residues
MFGYNSHLCCSHWIVRLLSYRSVLVRLFPFCLQCALALVVGAVLAESAVAQNQSETERKLARTRSELNDVAKQRQQLESQ
RGDATRRLRQVDEQVARSARDLSRIEDKLREQEQALIQAQGQREQMQQGLEEQRRQLAVLLRVVYQVGDSVPLKLLLSQD
SVADANRLVIYHRYLQRARAERIRALTQELQGLVALEQRIAVQRQTLEQTRLQQVGQASILKQDRQKQAKTVAELDTRYQ
ERSKREKVLGQNAKALEQVLASLRAAAARAEAERREAARRSAAQAELEAKSGHVPAKMPPKGTTNVTGPKVGGLSWPVTG
NLLASYGGALPDGRISKGVLIAAPAGNNVVAVADGMVVFAEWMTGYGMILIVDHGNGYMSLYANNDTLLRNPGTYVKRGE
LVAKVGRSGGQGVSALYFELRHNGQPINPLSWLQKH

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=390, Percent_Identity=30, Blast_Score=152, Evalue=4e-38,
Organism=Escherichia coli, GI1789099, Length=119, Percent_Identity=38.655462184874, Blast_Score=82, Evalue=8e-17,
Organism=Escherichia coli, GI87082174, Length=173, Percent_Identity=31.2138728323699, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI87081989, Length=101, Percent_Identity=35.6435643564356, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 48395; Mature: 48395

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGYNSHLCCSHWIVRLLSYRSVLVRLFPFCLQCALALVVGAVLAESAVAQNQSETERKL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ARTRSELNDVAKQRQQLESQRGDATRRLRQVDEQVARSARDLSRIEDKLREQEQALIQAQ
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GQREQMQQGLEEQRRQLAVLLRVVYQVGDSVPLKLLLSQDSVADANRLVIYHRYLQRARA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH
ERIRALTQELQGLVALEQRIAVQRQTLEQTRLQQVGQASILKQDRQKQAKTVAELDTRYQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERSKREKVLGQNAKALEQVLASLRAAAARAEAERREAARRSAAQAELEAKSGHVPAKMPP
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
KGTTNVTGPKVGGLSWPVTGNLLASYGGALPDGRISKGVLIAAPAGNNVVAVADGMVVFA
CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEECCHHHHH
EWMTGYGMILIVDHGNGYMSLYANNDTLLRNPGTYVKRGELVAKVGRSGGQGVSALYFEL
HHHHCCCEEEEEECCCCEEEEEECCCEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHH
RHNGQPINPLSWLQKH
HCCCCCCCHHHHHHCC
>Mature Secondary Structure
MFGYNSHLCCSHWIVRLLSYRSVLVRLFPFCLQCALALVVGAVLAESAVAQNQSETERKL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ARTRSELNDVAKQRQQLESQRGDATRRLRQVDEQVARSARDLSRIEDKLREQEQALIQAQ
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GQREQMQQGLEEQRRQLAVLLRVVYQVGDSVPLKLLLSQDSVADANRLVIYHRYLQRARA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH
ERIRALTQELQGLVALEQRIAVQRQTLEQTRLQQVGQASILKQDRQKQAKTVAELDTRYQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERSKREKVLGQNAKALEQVLASLRAAAARAEAERREAARRSAAQAELEAKSGHVPAKMPP
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
KGTTNVTGPKVGGLSWPVTGNLLASYGGALPDGRISKGVLIAAPAGNNVVAVADGMVVFA
CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEECCHHHHH
EWMTGYGMILIVDHGNGYMSLYANNDTLLRNPGTYVKRGELVAKVGRSGGQGVSALYFEL
HHHHCCCEEEEEECCCCEEEEEECCCEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHH
RHNGQPINPLSWLQKH
HCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]