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The map label for this gene is ctpA [H]

Identifier: 182682670

GI number: 182682670

Start: 2443066

End: 2444520

Strand: Reverse

Name: ctpA [H]

Synonym: XfasM23_2160

Alternate gene names: 182682670

Gene position: 2444520-2443066 (Counterclockwise)

Preceding gene: 182682671

Following gene: 182682669

Centisome position: 96.4

GC content: 53.06

Gene sequence:

>1455_bases
ATGCGTGTTGTTGGGTTGTCATTGGCCATAAGTGTGGTCTTGTTGTCTTTCTCGTTGTCGGCGAAGAATCCCAGCGGTGT
TGTTATGTCTCCTCCGGTTGAAGAGATGGAAATGCCGGAGAGCAACGATGTTAACGTGCCGTTAGATGAAATCCGCCGCT
TTGTTTCTGTGTATAACGCCATCAAGCAAGCCTATGTTGATCCGGTCAATGACAGGAAGCTGATGCATTCTGCGGTGCGA
GGTCTGCTTTCGGATCTGGATCCGCATAGTACCTATTTTGATAAGGAGGATGCCGATGCCTTCGACGAGCAAACCAGCGG
TGTTTACGATGGGATCGGTGTGGAGCTGCAAGAGCAGTCGGACAACACGTTGAAGGTGATCGCGCCGATTGATGATACGC
CAGCAGCGCGTGCTGGTTTGCGTCCAGGTGATCTGATCGTGGCGATCAACGGCAAGCCGCTTGCCAATGTCGATGCGATG
AAGCCGCTGCGCGGTGCGCCAGGCAGTCAAGTCACTTTGACGATTGTGCGCGATAAGAATGGCAAGCCATTCGATATGAC
AATCAAGCGTGAGACGATACACATCGCTAGTGTGCGTAGCCGTATGCTTGAGCCTGGTTATGGCTATATCCGTATTAGTG
TTTTCCAGGCCGATACGGGTAACGATTTCCATAAGCATTTGGGACAGCTTAAGCAGCAAGCGGGTGGTAAGTTGCGTGGT
CTGTTATTGGACTTGCGTAGTAATCCTGGTGGATTGCTGACGGCAGCGGTGCAGGTTGCTGATGCTTTGTTGGATAAGGG
AAACATTGTCAGTACGCGTGGCCGTATTTCGGCGAGTGATACGCGCTTTGATGCAACGCTGGGAGATTTACTGGATGGTC
TCCCGTTGGTGGTATTGGTCGATGCTGGTTCGGCCAGCGCTTCGGAGGTGTTGGTGGGTGCGCTGAGTGACAATCATCGT
GCGCGCGTCATTGGCAGCTGTACCTTCGGTAAGGGATCGGTGCAGACGTTGTTGCCGCTTGATAATGGCGATTCGGTCAA
ATTGACGACGGCGCGTTATTACACTCCGAGTGGTCGTTCGATCCAAGCGAGGGGGATTGTTCCTGATCTGCTGCTCAAGC
CAGATGGTGTTGGAGCGGCTGATCTTTCAGGCAGCGGGATTGATCGCAGTGAGGCAGGGCTTCCAGGCCATTTGCGTGGT
ACTGATGAAGGGGTGCCAGGTTGTACTTCCAGTGATCCGTTGCCGGGCGATACGCCGATCATGACGGCGTTGTTGGAGCT
AAAGCAACCGGGTTCAGCGGTGCAGGCTAAAAAAGCGATCCCTGTAAAAGTGGTCAGCGATGTTAAGTCGGCAACAAAGA
GTCCGTTGTCAGTGTTTGGTAAGGATAGGGCTGTCAAGCGAGTGCCGGTGGTGTCTCCTACAAGTGAGCAAGTTGATGGT
CAGCCAAGCAAATAG

Upstream 100 bases:

>100_bases
TGCTGATTCGGCGGCCATTCAATCTGTATTGTCTGTTGCTTCCCGCATAATTCGTCATTGCTCGGTAGTACCGGGTGCCG
TTTTCTTTCCGGAGTGCTGC

Downstream 100 bases:

>100_bases
CATGGTGTGCCGTATTGTTAGGGGGCTGTCTGTGGTTTTTTAAAAATGTTCGGATGATGTGTTGCATGTGGTTTTGTATG
AATGATGGTGTCCTGGGTGT

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MRVVGLSLAISVVLLSFSLSAKNPSGVVMSPPVEEMEMPESNDVNVPLDEIRRFVSVYNAIKQAYVDPVNDRKLMHSAVR
GLLSDLDPHSTYFDKEDADAFDEQTSGVYDGIGVELQEQSDNTLKVIAPIDDTPAARAGLRPGDLIVAINGKPLANVDAM
KPLRGAPGSQVTLTIVRDKNGKPFDMTIKRETIHIASVRSRMLEPGYGYIRISVFQADTGNDFHKHLGQLKQQAGGKLRG
LLLDLRSNPGGLLTAAVQVADALLDKGNIVSTRGRISASDTRFDATLGDLLDGLPLVVLVDAGSASASEVLVGALSDNHR
ARVIGSCTFGKGSVQTLLPLDNGDSVKLTTARYYTPSGRSIQARGIVPDLLLKPDGVGAADLSGSGIDRSEAGLPGHLRG
TDEGVPGCTSSDPLPGDTPIMTALLELKQPGSAVQAKKAIPVKVVSDVKSATKSPLSVFGKDRAVKRVPVVSPTSEQVDG
QPSK

Sequences:

>Translated_484_residues
MRVVGLSLAISVVLLSFSLSAKNPSGVVMSPPVEEMEMPESNDVNVPLDEIRRFVSVYNAIKQAYVDPVNDRKLMHSAVR
GLLSDLDPHSTYFDKEDADAFDEQTSGVYDGIGVELQEQSDNTLKVIAPIDDTPAARAGLRPGDLIVAINGKPLANVDAM
KPLRGAPGSQVTLTIVRDKNGKPFDMTIKRETIHIASVRSRMLEPGYGYIRISVFQADTGNDFHKHLGQLKQQAGGKLRG
LLLDLRSNPGGLLTAAVQVADALLDKGNIVSTRGRISASDTRFDATLGDLLDGLPLVVLVDAGSASASEVLVGALSDNHR
ARVIGSCTFGKGSVQTLLPLDNGDSVKLTTARYYTPSGRSIQARGIVPDLLLKPDGVGAADLSGSGIDRSEAGLPGHLRG
TDEGVPGCTSSDPLPGDTPIMTALLELKQPGSAVQAKKAIPVKVVSDVKSATKSPLSVFGKDRAVKRVPVVSPTSEQVDG
QPSK
>Mature_484_residues
MRVVGLSLAISVVLLSFSLSAKNPSGVVMSPPVEEMEMPESNDVNVPLDEIRRFVSVYNAIKQAYVDPVNDRKLMHSAVR
GLLSDLDPHSTYFDKEDADAFDEQTSGVYDGIGVELQEQSDNTLKVIAPIDDTPAARAGLRPGDLIVAINGKPLANVDAM
KPLRGAPGSQVTLTIVRDKNGKPFDMTIKRETIHIASVRSRMLEPGYGYIRISVFQADTGNDFHKHLGQLKQQAGGKLRG
LLLDLRSNPGGLLTAAVQVADALLDKGNIVSTRGRISASDTRFDATLGDLLDGLPLVVLVDAGSASASEVLVGALSDNHR
ARVIGSCTFGKGSVQTLLPLDNGDSVKLTTARYYTPSGRSIQARGIVPDLLLKPDGVGAADLSGSGIDRSEAGLPGHLRG
TDEGVPGCTSSDPLPGDTPIMTALLELKQPGSAVQAKKAIPVKVVSDVKSATKSPLSVFGKDRAVKRVPVVSPTSEQVDG
QPSK

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=331, Percent_Identity=31.1178247734139, Blast_Score=122, Evalue=7e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 51090; Mature: 51090

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVGLSLAISVVLLSFSLSAKNPSGVVMSPPVEEMEMPESNDVNVPLDEIRRFVSVYNA
CEEEEHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHCCCCCCCCCCCHHHHHHHHHHHHH
IKQAYVDPVNDRKLMHSAVRGLLSDLDPHSTYFDKEDADAFDEQTSGVYDGIGVELQEQS
HHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEECCC
DNTLKVIAPIDDTPAARAGLRPGDLIVAINGKPLANVDAMKPLRGAPGSQVTLTIVRDKN
CCEEEEEECCCCCCHHHCCCCCCCEEEEECCCCCCCCHHCCCCCCCCCCEEEEEEEECCC
GKPFDMTIKRETIHIASVRSRMLEPGYGYIRISVFQADTGNDFHKHLGQLKQQAGGKLRG
CCCEEEEEECCEEEHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCEEE
LLLDLRSNPGGLLTAAVQVADALLDKGNIVSTRGRISASDTRFDATLGDLLDGLPLVVLV
EEEEECCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEE
DAGSASASEVLVGALSDNHRARVIGSCTFGKGSVQTLLPLDNGDSVKLTTARYYTPSGRS
ECCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCEEEEECCCCCEEEEEEEEEECCCCCE
IQARGIVPDLLLKPDGVGAADLSGSGIDRSEAGLPGHLRGTDEGVPGCTSSDPLPGDTPI
EEECCCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
MTALLELKQPGSAVQAKKAIPVKVVSDVKSATKSPLSVFGKDRAVKRVPVVSPTSEQVDG
HHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHCCCHHHHCCCCCEEECCCCCCCHHHCCC
QPSK
CCCC
>Mature Secondary Structure
MRVVGLSLAISVVLLSFSLSAKNPSGVVMSPPVEEMEMPESNDVNVPLDEIRRFVSVYNA
CEEEEHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHCCCCCCCCCCCHHHHHHHHHHHHH
IKQAYVDPVNDRKLMHSAVRGLLSDLDPHSTYFDKEDADAFDEQTSGVYDGIGVELQEQS
HHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEECCC
DNTLKVIAPIDDTPAARAGLRPGDLIVAINGKPLANVDAMKPLRGAPGSQVTLTIVRDKN
CCEEEEEECCCCCCHHHCCCCCCCEEEEECCCCCCCCHHCCCCCCCCCCEEEEEEEECCC
GKPFDMTIKRETIHIASVRSRMLEPGYGYIRISVFQADTGNDFHKHLGQLKQQAGGKLRG
CCCEEEEEECCEEEHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCEEE
LLLDLRSNPGGLLTAAVQVADALLDKGNIVSTRGRISASDTRFDATLGDLLDGLPLVVLV
EEEEECCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEE
DAGSASASEVLVGALSDNHRARVIGSCTFGKGSVQTLLPLDNGDSVKLTTARYYTPSGRS
ECCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCEEEEECCCCCEEEEEEEEEECCCCCE
IQARGIVPDLLLKPDGVGAADLSGSGIDRSEAGLPGHLRGTDEGVPGCTSSDPLPGDTPI
EEECCCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
MTALLELKQPGSAVQAKKAIPVKVVSDVKSATKSPLSVFGKDRAVKRVPVVSPTSEQVDG
HHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHCCCHHHHCCCCCEEECCCCCCCHHHCCC
QPSK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]