Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682658
Identifier: 182682658
GI number: 182682658
Start: 2425670
End: 2426635
Strand: Reverse
Name: 182682658
Synonym: XfasM23_2148
Alternate gene names: NA
Gene position: 2426635-2425670 (Counterclockwise)
Preceding gene: 182682660
Following gene: 182682657
Centisome position: 95.7
GC content: 53.42
Gene sequence:
>966_bases ATGACCGCTGTTCCCAAAGTTGCAATTACTTCTCCCGCTGCACTATTGGCTTTTCTACGTGGTGTTGAGCGTCGTGCCGT CGTACTTGTTGAATTACAGACAGGTACCATGTCTGCGGCACAGGCGGTGTTGCCTGCTGCCATCAGGATTTTCGGTGCTG AGGCTGTAGATTGCCCCTTTGCTGAATGGTCGATACGTTTTTGGAGTTTGCTGTGTGGTGCCCCAGTGCTGCGTCGGCCG CCTCTTACAGGGCAACGCTGGCCAAAAGAGTTGGTGTCCTTGCAAGCCATGGCAGTAGAAGATCGGCTTGCACTGCTGTT GCGAATCGTTGCTGGCCTGGATGAGGCTCAGGCTGCGGTAGTGTTAGGGAAGCCGTTGGAAACTTATTACCAAGCGCTAG CGCGTGCCTGTCCGCGTGATGTGCAGGGTCGCCCTAACCCAGCGGCTTGGCGTGCATTGGCCGAAGCGGCTCAGCAGCGG GTACGGAGTCTATCCATCAAGCGTCTTGTCACGACGACTGTGCTTCCGTCTCCATCACCCAAGATTAGTGTTGCTGAGTC TGCTGTTTCACGATTCCCTGCGCCCATAAGGTTTGAGCGGAATTGGGTCGTAATAGCCGGATTGACCTTGGGGGTGATAT TCATGTTGAATTTGGCTTGGAACCGGAATATATGGTCAGTGCCAGATCCCCAATATGTCTCCAAGGGTTTTCCTGCCGTG TTACCTCTTCTAGAAGATTCGCCAGTAGTTATCGAAGCACTGCCAGACTACGTATCGTCGGCGTCGCCACAGGTGATATC GCCAGATCTTGCTGATCGCGCCATGCTTGAAGATAGTGCCTTGGAAGCGGCGCGTCAGGCAGATTTTTTTGCTTGGTACG TAGCTGGTCAGCCTATACCTCCAGATGAATCTGATTTAGCTCCGGTGGTAGCTTTTAGCATTCGGCACAATGGGAATCGT CGATGA
Upstream 100 bases:
>100_bases GGTGAGCTCAATACATGGATTGGGAGTGCTAGATCAAAAGTGCTTTAAGAGGTCGTCTGCCCCCTATTGACCGCTATCAT GCTTGGATACTGGAGTATCC
Downstream 100 bases:
>100_bases CCAGAGTCGAGCGTTGTCGAACGTATTGTTGTTTTCTTGTGCTATTGGTTGTGTCATCTGCAGTTTGCATCTGTGGTCAA GCACAGGACTTGGCTGTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MTAVPKVAITSPAALLAFLRGVERRAVVLVELQTGTMSAAQAVLPAAIRIFGAEAVDCPFAEWSIRFWSLLCGAPVLRRP PLTGQRWPKELVSLQAMAVEDRLALLLRIVAGLDEAQAAVVLGKPLETYYQALARACPRDVQGRPNPAAWRALAEAAQQR VRSLSIKRLVTTTVLPSPSPKISVAESAVSRFPAPIRFERNWVVIAGLTLGVIFMLNLAWNRNIWSVPDPQYVSKGFPAV LPLLEDSPVVIEALPDYVSSASPQVISPDLADRAMLEDSALEAARQADFFAWYVAGQPIPPDESDLAPVVAFSIRHNGNR R
Sequences:
>Translated_321_residues MTAVPKVAITSPAALLAFLRGVERRAVVLVELQTGTMSAAQAVLPAAIRIFGAEAVDCPFAEWSIRFWSLLCGAPVLRRP PLTGQRWPKELVSLQAMAVEDRLALLLRIVAGLDEAQAAVVLGKPLETYYQALARACPRDVQGRPNPAAWRALAEAAQQR VRSLSIKRLVTTTVLPSPSPKISVAESAVSRFPAPIRFERNWVVIAGLTLGVIFMLNLAWNRNIWSVPDPQYVSKGFPAV LPLLEDSPVVIEALPDYVSSASPQVISPDLADRAMLEDSALEAARQADFFAWYVAGQPIPPDESDLAPVVAFSIRHNGNR R >Mature_320_residues TAVPKVAITSPAALLAFLRGVERRAVVLVELQTGTMSAAQAVLPAAIRIFGAEAVDCPFAEWSIRFWSLLCGAPVLRRPP LTGQRWPKELVSLQAMAVEDRLALLLRIVAGLDEAQAAVVLGKPLETYYQALARACPRDVQGRPNPAAWRALAEAAQQRV RSLSIKRLVTTTVLPSPSPKISVAESAVSRFPAPIRFERNWVVIAGLTLGVIFMLNLAWNRNIWSVPDPQYVSKGFPAVL PLLEDSPVVIEALPDYVSSASPQVISPDLADRAMLEDSALEAARQADFFAWYVAGQPIPPDESDLAPVVAFSIRHNGNRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34912; Mature: 34781
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVPKVAITSPAALLAFLRGVERRAVVLVELQTGTMSAAQAVLPAAIRIFGAEAVDCPF CCCCCCCHHCCHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCC AEWSIRFWSLLCGAPVLRRPPLTGQRWPKELVSLQAMAVEDRLALLLRIVAGLDEAQAAV HHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEE VLGKPLETYYQALARACPRDVQGRPNPAAWRALAEAAQQRVRSLSIKRLVTTTVLPSPSP EECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC KISVAESAVSRFPAPIRFERNWVVIAGLTLGVIFMLNLAWNRNIWSVPDPQYVSKGFPAV CHHHHHHHHHHCCCCEEECCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCE LPLLEDSPVVIEALPDYVSSASPQVISPDLADRAMLEDSALEAARQADFFAWYVAGQPIP EHHCCCCCCCEEHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC PDESDLAPVVAFSIRHNGNRR CCCCCCCCEEEEEEECCCCCC >Mature Secondary Structure TAVPKVAITSPAALLAFLRGVERRAVVLVELQTGTMSAAQAVLPAAIRIFGAEAVDCPF CCCCCCHHCCHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCC AEWSIRFWSLLCGAPVLRRPPLTGQRWPKELVSLQAMAVEDRLALLLRIVAGLDEAQAAV HHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEE VLGKPLETYYQALARACPRDVQGRPNPAAWRALAEAAQQRVRSLSIKRLVTTTVLPSPSP EECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC KISVAESAVSRFPAPIRFERNWVVIAGLTLGVIFMLNLAWNRNIWSVPDPQYVSKGFPAV CHHHHHHHHHHCCCCEEECCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCE LPLLEDSPVVIEALPDYVSSASPQVISPDLADRAMLEDSALEAARQADFFAWYVAGQPIP EHHCCCCCCCEEHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC PDESDLAPVVAFSIRHNGNRR CCCCCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA