Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682657
Identifier: 182682657
GI number: 182682657
Start: 2425101
End: 2425673
Strand: Reverse
Name: 182682657
Synonym: XfasM23_2147
Alternate gene names: NA
Gene position: 2425673-2425101 (Counterclockwise)
Preceding gene: 182682658
Following gene: 182682656
Centisome position: 95.66
GC content: 55.15
Gene sequence:
>573_bases ATGACCAGAGTCGAGCGTTGTCGAACGTATTGTTGTTTTCTTGTGCTATTGGTTGTGTCATCTGCAGTTTGCATCTGTGG TCAAGCACAGGACTTGGCTGTTGTATCTCCTGCGTCTATTTCTGCCCAGAAATTACTGCGTTGGCAACATATGACTCCAG CGCAGCAGGCTGATTTGCGCTTGCGTTACCGCGCTTGGCTGGCTATGGCGCCGGATGAGCATGTGCGTATTCTGAAGGCT AAGTCAGGAATTGCGTCACTATCGCCAATGCAACAGCAGGCACTACAAGCACGGTTCGCTCGATTAGATCGGATGTACAG CCGCGGTTGGTTGCTGGGTCCGCGCTTGGGTGCACACTATGCGCATCTACAACCGCTGATTGGCTACGTGCAGGAGTCCG AGCGGACCCCACTTTTGGCGTTGCTGCACGATTTGGATGATGTCCAATTGGCGCAGTTGGCGACGCTGGTTCAGCGTACT CCGCCAGCGCAATGTGATGCACTGCGTCGGGAATTGCTGGCACAGACACCGGCTGAGCGTGATGCATGGTTGCGGACACG GCTGCGACGCTAG
Upstream 100 bases:
>100_bases ATTTTTTTGCTTGGTACGTAGCTGGTCAGCCTATACCTCCAGATGAATCTGATTTAGCTCCGGTGGTAGCTTTTAGCATT CGGCACAATGGGAATCGTCG
Downstream 100 bases:
>100_bases AGGGGGAAAGCGATAAAGAATTTATATGGTGTAAAGTTAATTTCTAAAGAAAAACCACATAACGTGCCCTCATACCGATT TTGAGGCATTAAGACATCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidase Protein
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MTRVERCRTYCCFLVLLVVSSAVCICGQAQDLAVVSPASISAQKLLRWQHMTPAQQADLRLRYRAWLAMAPDEHVRILKA KSGIASLSPMQQQALQARFARLDRMYSRGWLLGPRLGAHYAHLQPLIGYVQESERTPLLALLHDLDDVQLAQLATLVQRT PPAQCDALRRELLAQTPAERDAWLRTRLRR
Sequences:
>Translated_190_residues MTRVERCRTYCCFLVLLVVSSAVCICGQAQDLAVVSPASISAQKLLRWQHMTPAQQADLRLRYRAWLAMAPDEHVRILKA KSGIASLSPMQQQALQARFARLDRMYSRGWLLGPRLGAHYAHLQPLIGYVQESERTPLLALLHDLDDVQLAQLATLVQRT PPAQCDALRRELLAQTPAERDAWLRTRLRR >Mature_189_residues TRVERCRTYCCFLVLLVVSSAVCICGQAQDLAVVSPASISAQKLLRWQHMTPAQQADLRLRYRAWLAMAPDEHVRILKAK SGIASLSPMQQQALQARFARLDRMYSRGWLLGPRLGAHYAHLQPLIGYVQESERTPLLALLHDLDDVQLAQLATLVQRTP PAQCDALRRELLAQTPAERDAWLRTRLRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21578; Mature: 21446
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRVERCRTYCCFLVLLVVSSAVCICGQAQDLAVVSPASISAQKLLRWQHMTPAQQADLR CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHCCCCHHHHHHH LRYRAWLAMAPDEHVRILKAKSGIASLSPMQQQALQARFARLDRMYSRGWLLGPRLGAHY HHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH AHLQPLIGYVQESERTPLLALLHDLDDVQLAQLATLVQRTPPAQCDALRRELLAQTPAER HHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCH DAWLRTRLRR HHHHHHHHCC >Mature Secondary Structure TRVERCRTYCCFLVLLVVSSAVCICGQAQDLAVVSPASISAQKLLRWQHMTPAQQADLR CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHCCCCHHHHHHH LRYRAWLAMAPDEHVRILKAKSGIASLSPMQQQALQARFARLDRMYSRGWLLGPRLGAHY HHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH AHLQPLIGYVQESERTPLLALLHDLDDVQLAQLATLVQRTPPAQCDALRRELLAQTPAER HHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCH DAWLRTRLRR HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA