Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682636
Identifier: 182682636
GI number: 182682636
Start: 2395444
End: 2395797
Strand: Reverse
Name: 182682636
Synonym: XfasM23_2124
Alternate gene names: NA
Gene position: 2395797-2395444 (Counterclockwise)
Preceding gene: 182682637
Following gene: 182682633
Centisome position: 94.48
GC content: 53.11
Gene sequence:
>354_bases GTGTTGCGCTGTACGGTTGCGGTGGTAGGGCCGTTAGGGGCAATGGTGGGTGTGATGGTTTCAGGTTGCGATGTGTGTTT TTTTAAGTTGAGAAGGGGTTGGGTGAGGGTGCTTTCTCAAGCTGAGGAGGTGATGTTGCGGTCTGTCTGTATGGTGTTGG TAGTAGGTAGTCACCAGGGTACTGGTGGCTGTTATGTCATTGTTGGTCTATTGGGTGTGTGGCTGGCCATGTGGACGCTA TGCAGTGGGATGGCTGGTTTGCTCAAAGGGGTGGGGAGGAGGTGGGGCAGGAATGTTTGTGGGGTTATCTCCGGTTTCTG TTCAGTCAGTGTCTGTGCATGGTGGTGTTGTTAG
Upstream 100 bases:
>100_bases ATTTTTCGCGCAATACGAGGATCCATCGTACGTGGCTGTTGTGGCGGTAGTGGGGTGTTTGCAGGGAGTTGTTGGGGTGT TTCTCTGGAGGTAATCGGCA
Downstream 100 bases:
>100_bases GCAAGGTTGTTGAATGAAGTTCCAGTGAGGTTTCAGGCTGGTGTTATGGGGCGTTGCTCAGTCGTGCGAGTTCTTCGGCT TGGTGTTCTTGTCGTAGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MLRCTVAVVGPLGAMVGVMVSGCDVCFFKLRRGWVRVLSQAEEVMLRSVCMVLVVGSHQGTGGCYVIVGLLGVWLAMWTL CSGMAGLLKGVGRRWGRNVCGVISGFCSVSVCAWWCC
Sequences:
>Translated_117_residues MLRCTVAVVGPLGAMVGVMVSGCDVCFFKLRRGWVRVLSQAEEVMLRSVCMVLVVGSHQGTGGCYVIVGLLGVWLAMWTL CSGMAGLLKGVGRRWGRNVCGVISGFCSVSVCAWWCC >Mature_117_residues MLRCTVAVVGPLGAMVGVMVSGCDVCFFKLRRGWVRVLSQAEEVMLRSVCMVLVVGSHQGTGGCYVIVGLLGVWLAMWTL CSGMAGLLKGVGRRWGRNVCGVISGFCSVSVCAWWCC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12495; Mature: 12495
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
9.4 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 15.4 %Cys+Met (Translated Protein) 9.4 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 15.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRCTVAVVGPLGAMVGVMVSGCDVCFFKLRRGWVRVLSQAEEVMLRSVCMVLVVGSHQG CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TGGCYVIVGLLGVWLAMWTLCSGMAGLLKGVGRRWGRNVCGVISGFCSVSVCAWWCC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLRCTVAVVGPLGAMVGVMVSGCDVCFFKLRRGWVRVLSQAEEVMLRSVCMVLVVGSHQG CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TGGCYVIVGLLGVWLAMWTLCSGMAGLLKGVGRRWGRNVCGVISGFCSVSVCAWWCC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA