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The map label for this gene is 182682633

Identifier: 182682633

GI number: 182682633

Start: 2391293

End: 2392972

Strand: Reverse

Name: 182682633

Synonym: XfasM23_2121

Alternate gene names: NA

Gene position: 2392972-2391293 (Counterclockwise)

Preceding gene: 182682636

Following gene: 182682632

Centisome position: 94.37

GC content: 54.64

Gene sequence:

>1680_bases
ATGCTCGTGCCGATTCGCATCCTTACAGTTCCATTGTTGTTTTTTATCGTGTTTCCCGCAGTTGCTGCTCGCGCGGCTTT
TGGCGATCCGGCGACTCAGGTGAGTCCTTGGTTGGGGCCCGTTTTGGTGGCCGAGTTTGAATTGCAATCTGGGCAGCTGA
GCAATGCGGCGAGATGGTATTTGCAGGCTGCACGTTTTCAGCCTGGGAATGTCGGTCTCGTTGAGCGTGCCGCTCGCATT
GCGATGTTGGCGGGTGATGATGTCGGTGCGGAGCGTGCTTTAGCGATCTGGGGTGTCCGCGCGCCTAAGTCGTTGTCAAT
GCGTGAGGTCGAAGTATCACTCGCTATGCGTCGCCAGCAGGTCAATATGGCGCGCCATGGGCTTACCGGGTTGCTGCGTA
ATCCTGATCCCCGTAGTTGGCGTTATGCGTTGATTGCACTCAACAATGGCGGCCGTGATCCGCAGCTGTCGGTTAGGTTG
ATGGAGGAGTTGGTTCGCCGCGGTGATATCCCTAATCGGATTGAGGTCTGGCAGGAGTTTGGTCGTTTGGCGTTGCGTTT
GGAGCAGCCGATATTGGTGAAGCACATCATCGACCAGTTGATGCTGCGCTTTCCTAAGGATCCACGTGTGGCGTTGTTGC
AGGCTGCTCAGTTGCAGCAGGCGGGTAAGCGTAAGCAGGCTCTTTCTAAGCTAAAGGAGGTTGAGCGGCGTGCGGTAGCT
GATGTGGATCTGCGTGGGGCATTAGCTTTGACTTATGAAGGCATGGGTGAAGGTAAGGCTGCTGCACGGGTGCTTGCCAC
TGGTCCGCAGGATGTTCAAACCTATGGTTTGCGTGCTTCGTTGCTAGCTCGCCAGCAGGAGAGGCAGGCGTTGATTGCTT
TGTATGAGGAGTTGAGTGGTGGGAGCGGGACGCATGAGCCGGAGAAGCGTCTTCTGTTAGGTAAGATTGCTGAGTTTCTG
ATGCGTTACGAGGATGCGCTTTCTTGGTATCACGGGGTGTTGGATGGGGAGCTGCGTGGTGAGGCGGTGTTGCGTGCGGT
CAGCGTGTTATTTGAGTTGAAGCGCTATGATGAGGCGTTCGATGAGGTGCATCGCTTGCAGGGGGATGCTGCGATTGATG
ATGAGCAGCGTCGCGATGCTTATTTGGTTGAGGCTGAGTTAAAACAGCGCTTGGGTGACTCTGCAGGTGAGTTGAACGCT
TTTGCGCGTGGATTGGATGAGTTTCCTAACGACAGTGAGCTTCTTTATGTGCGTGCGCTGGCTTGGGAGCGTCGTGATGA
CATCGTTCAGGCTGAGGCCGATTTGCGTAAGTTGCTGGTTGCCGATCCGGGCAATGTGGTCGCGTTGAATGCGCTTGGTT
ATACCTTGGCCAACCATACGATCCGCTACAAGGAGGCGTTGGCGTTGATTGATCGTGCCCGTGCGGCTGAGCCTGATAAT
CCTTCGATTATCGATAGTTACGGTTGGGTCATTTATCGACTGGGACGGGTTAAGGAGGCTTTGGTGGAGCTTAAGCGTGC
TTGGTCTTTAGCTAAGGAGCCAGAGATTGCTGTGCATGTCGGTGAGGTGCTGTGGGCGGATGGTCAGCGCGAGGAGGCAC
GGTACTATTTTGAGGAAGCGCGTAAATTGGATCCGGATAATTTGGTGTTGCGCCATGTACTGGAAAAGTTTGGGTTATGA

Upstream 100 bases:

>100_bases
TTTGATGGTTCAGTCCGAGTACCCACAACGTCATCGTTCAGTTACTTGCTATAAGCTGCTTGTTATTCATGTCCTCCATT
TTACGGTCCGGTTGCTCCCG

Downstream 100 bases:

>100_bases
AGGTGTATTTGCATGATGTGAATAGGGGCTTGGGTGTGTTCTTGTTGGCAGTCTCTTTTTTGTTGCCTGGGTGTAGCAGC
AGTGGTGGCCGGCGTGCGTC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MLVPIRILTVPLLFFIVFPAVAARAAFGDPATQVSPWLGPVLVAEFELQSGQLSNAARWYLQAARFQPGNVGLVERAARI
AMLAGDDVGAERALAIWGVRAPKSLSMREVEVSLAMRRQQVNMARHGLTGLLRNPDPRSWRYALIALNNGGRDPQLSVRL
MEELVRRGDIPNRIEVWQEFGRLALRLEQPILVKHIIDQLMLRFPKDPRVALLQAAQLQQAGKRKQALSKLKEVERRAVA
DVDLRGALALTYEGMGEGKAAARVLATGPQDVQTYGLRASLLARQQERQALIALYEELSGGSGTHEPEKRLLLGKIAEFL
MRYEDALSWYHGVLDGELRGEAVLRAVSVLFELKRYDEAFDEVHRLQGDAAIDDEQRRDAYLVEAELKQRLGDSAGELNA
FARGLDEFPNDSELLYVRALAWERRDDIVQAEADLRKLLVADPGNVVALNALGYTLANHTIRYKEALALIDRARAAEPDN
PSIIDSYGWVIYRLGRVKEALVELKRAWSLAKEPEIAVHVGEVLWADGQREEARYYFEEARKLDPDNLVLRHVLEKFGL

Sequences:

>Translated_559_residues
MLVPIRILTVPLLFFIVFPAVAARAAFGDPATQVSPWLGPVLVAEFELQSGQLSNAARWYLQAARFQPGNVGLVERAARI
AMLAGDDVGAERALAIWGVRAPKSLSMREVEVSLAMRRQQVNMARHGLTGLLRNPDPRSWRYALIALNNGGRDPQLSVRL
MEELVRRGDIPNRIEVWQEFGRLALRLEQPILVKHIIDQLMLRFPKDPRVALLQAAQLQQAGKRKQALSKLKEVERRAVA
DVDLRGALALTYEGMGEGKAAARVLATGPQDVQTYGLRASLLARQQERQALIALYEELSGGSGTHEPEKRLLLGKIAEFL
MRYEDALSWYHGVLDGELRGEAVLRAVSVLFELKRYDEAFDEVHRLQGDAAIDDEQRRDAYLVEAELKQRLGDSAGELNA
FARGLDEFPNDSELLYVRALAWERRDDIVQAEADLRKLLVADPGNVVALNALGYTLANHTIRYKEALALIDRARAAEPDN
PSIIDSYGWVIYRLGRVKEALVELKRAWSLAKEPEIAVHVGEVLWADGQREEARYYFEEARKLDPDNLVLRHVLEKFGL
>Mature_559_residues
MLVPIRILTVPLLFFIVFPAVAARAAFGDPATQVSPWLGPVLVAEFELQSGQLSNAARWYLQAARFQPGNVGLVERAARI
AMLAGDDVGAERALAIWGVRAPKSLSMREVEVSLAMRRQQVNMARHGLTGLLRNPDPRSWRYALIALNNGGRDPQLSVRL
MEELVRRGDIPNRIEVWQEFGRLALRLEQPILVKHIIDQLMLRFPKDPRVALLQAAQLQQAGKRKQALSKLKEVERRAVA
DVDLRGALALTYEGMGEGKAAARVLATGPQDVQTYGLRASLLARQQERQALIALYEELSGGSGTHEPEKRLLLGKIAEFL
MRYEDALSWYHGVLDGELRGEAVLRAVSVLFELKRYDEAFDEVHRLQGDAAIDDEQRRDAYLVEAELKQRLGDSAGELNA
FARGLDEFPNDSELLYVRALAWERRDDIVQAEADLRKLLVADPGNVVALNALGYTLANHTIRYKEALALIDRARAAEPDN
PSIIDSYGWVIYRLGRVKEALVELKRAWSLAKEPEIAVHVGEVLWADGQREEARYYFEEARKLDPDNLVLRHVLEKFGL

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011717
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR013105
- InterPro:   IPR019734 [H]

Pfam domain/function: PF07719 TPR_2; PF07721 TPR_4 [H]

EC number: NA

Molecular weight: Translated: 62743; Mature: 62743

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVPIRILTVPLLFFIVFPAVAARAAFGDPATQVSPWLGPVLVAEFELQSGQLSNAARWY
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHEEEECCCCCCHHHHHHH
LQAARFQPGNVGLVERAARIAMLAGDDVGAERALAIWGVRAPKSLSMREVEVSLAMRRQQ
HHHHCCCCCCCHHHHHHHHHHEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH
VNMARHGLTGLLRNPDPRSWRYALIALNNGGRDPQLSVRLMEELVRRGDIPNRIEVWQEF
HHHHHHCCHHHCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
GRLALRLEQPILVKHIIDQLMLRFPKDPRVALLQAAQLQQAGKRKQALSKLKEVERRAVA
HHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVDLRGALALTYEGMGEGKAAARVLATGPQDVQTYGLRASLLARQQERQALIALYEELSG
CCCCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GSGTHEPEKRLLLGKIAEFLMRYEDALSWYHGVLDGELRGEAVLRAVSVLFELKRYDEAF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DEVHRLQGDAAIDDEQRRDAYLVEAELKQRLGDSAGELNAFARGLDEFPNDSELLYVRAL
HHHHHHCCCCCCCCHHCCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEHH
AWERRDDIVQAEADLRKLLVADPGNVVALNALGYTLANHTIRYKEALALIDRARAAEPDN
HHHHHHHHHHHHHHHHHHHEECCCCEEEEHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCC
PSIIDSYGWVIYRLGRVKEALVELKRAWSLAKEPEIAVHVGEVLWADGQREEARYYFEEA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCCCHHHHHHHHHHH
RKLDPDNLVLRHVLEKFGL
HCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLVPIRILTVPLLFFIVFPAVAARAAFGDPATQVSPWLGPVLVAEFELQSGQLSNAARWY
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHEEEECCCCCCHHHHHHH
LQAARFQPGNVGLVERAARIAMLAGDDVGAERALAIWGVRAPKSLSMREVEVSLAMRRQQ
HHHHCCCCCCCHHHHHHHHHHEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH
VNMARHGLTGLLRNPDPRSWRYALIALNNGGRDPQLSVRLMEELVRRGDIPNRIEVWQEF
HHHHHHCCHHHCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
GRLALRLEQPILVKHIIDQLMLRFPKDPRVALLQAAQLQQAGKRKQALSKLKEVERRAVA
HHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DVDLRGALALTYEGMGEGKAAARVLATGPQDVQTYGLRASLLARQQERQALIALYEELSG
CCCCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GSGTHEPEKRLLLGKIAEFLMRYEDALSWYHGVLDGELRGEAVLRAVSVLFELKRYDEAF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DEVHRLQGDAAIDDEQRRDAYLVEAELKQRLGDSAGELNAFARGLDEFPNDSELLYVRAL
HHHHHHCCCCCCCCHHCCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEHH
AWERRDDIVQAEADLRKLLVADPGNVVALNALGYTLANHTIRYKEALALIDRARAAEPDN
HHHHHHHHHHHHHHHHHHHEECCCCEEEEHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCC
PSIIDSYGWVIYRLGRVKEALVELKRAWSLAKEPEIAVHVGEVLWADGQREEARYYFEEA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHCCCCCHHHHHHHHHHH
RKLDPDNLVLRHVLEKFGL
HCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7883699; 10984043 [H]