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The map label for this gene is regB [H]

Identifier: 182682575

GI number: 182682575

Start: 2315175

End: 2316392

Strand: Direct

Name: regB [H]

Synonym: XfasM23_2063

Alternate gene names: 182682575

Gene position: 2315175-2316392 (Clockwise)

Preceding gene: 182682572

Following gene: 182682576

Centisome position: 91.3

GC content: 55.67

Gene sequence:

>1218_bases
ATGCATACCTCTGCCACTTCATTCTTACGCACTCTGTGTACCTTGCGCTGGGTCGCCACTGCCGGACAGGTAGTGACCAT
CCTGATGGCCACCCATGCGATGGGCTTAGCATTGCCACAGGGGCCGCTGTGGGCCGGGGTTTGCACGCTGGCACTGTTTA
ACCTATATGCACAGCGACGCATTTCACACACCCATGTCACTTCACCGAACATCGAATTCAGCCATATCCTGGTCGATGTC
ACCGTACTCACCTGGATGGTCGGCTGGAGTGGCGGCATCAGCAATCCGTTCGGCTCACTGTTCCTGGTCCTGATCGCACT
GGCAGCGTTAGCGTTGCCGTTACGCTGGGCCATGGCAGTCGCGGCCGCTTGCGTCAGTGGCTACTTAGTCAGCGCCGCAT
TCGGCCTGCCACTACCACACAACCACTTCAACCCTCTCACCTTGCATATGTGGGGGATGGCGGCTAACTTTCTGCTCTCA
ACGGTAATGGTCCTGGTATTCACCACATGGCTGGCACAGGCACTACACGCCAGAGAACGTGAGATCTCGCTACTGCGTGA
ACGTTTCACACGCAATGAAGGCATCATCGCCCTGGCAACCCATGCAGCATCGGTTGCACACGAACTCAATACTCCATTAG
CTACCATGACGTTGCTCGCCGACGATGTCGCCGAGCAATGCCAGCAACTTGAGTTGTGCGAGGATTTGGAAACGCTACGC
GAGCTACTGACGCAATGCCGCAACCGTGTGCTGACACTCGCCGCACCCGCCGACAAGCTCAACGTTGATATCCAAGTGCA
TAACGTTCTAGATCAGTGGCAACTAATGCATCCGACGATCCATCTGAAACACAACGAGGATGCACCGCTACAATTGATGC
TGGAACCTGGAGTAGGCCACCTCATCATGGTGCTTCTCAATAATGCCGCCGACGCTGGCGAACGCAGTGACAGGCGGCAA
GTTGATTTGAATCTCCATATTCAGGATGGCCAGTTATACGGTGAGGTGCGCGACTATGGCTCTGGTTTCGAAACGCCCCA
GGGACTCTTACCAGGGATGCTGTTCCACACCCAAAAAGCAAATAGCATGGGCGTTGGTCTGGCATTGTCCCATGCGACCG
TCGAACGTCTGCAAGGCGACATCTGGATGCAACCCGCCAAAGGACGCGGCACACGAGTAAGCTTTCGAGTGCCCTTGAAG
GAAACATCCACGGCATGA

Upstream 100 bases:

>100_bases
AGCACACTCAGCCAGCACACAGACAACCCACATCAATCATATGCTGGTCATGCAAAAGTTTCTCCCAAAGCACCCCACAA
CCTAAATATGATGCAGACGC

Downstream 100 bases:

>100_bases
ATCACTCCGCCGCCAAGATCGGCTTGCTAGTCGACGACGACACACTCTATCTGCGCACCCTACAGCGCAGTTTGGGACGC
CGTGGCGTAGACACCGTGAC

Product: integral membrane sensor signal transduction histidine kinase

Products: NA

Alternate protein names: Protein prrB [H]

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MHTSATSFLRTLCTLRWVATAGQVVTILMATHAMGLALPQGPLWAGVCTLALFNLYAQRRISHTHVTSPNIEFSHILVDV
TVLTWMVGWSGGISNPFGSLFLVLIALAALALPLRWAMAVAAACVSGYLVSAAFGLPLPHNHFNPLTLHMWGMAANFLLS
TVMVLVFTTWLAQALHAREREISLLRERFTRNEGIIALATHAASVAHELNTPLATMTLLADDVAEQCQQLELCEDLETLR
ELLTQCRNRVLTLAAPADKLNVDIQVHNVLDQWQLMHPTIHLKHNEDAPLQLMLEPGVGHLIMVLLNNAADAGERSDRRQ
VDLNLHIQDGQLYGEVRDYGSGFETPQGLLPGMLFHTQKANSMGVGLALSHATVERLQGDIWMQPAKGRGTRVSFRVPLK
ETSTA

Sequences:

>Translated_405_residues
MHTSATSFLRTLCTLRWVATAGQVVTILMATHAMGLALPQGPLWAGVCTLALFNLYAQRRISHTHVTSPNIEFSHILVDV
TVLTWMVGWSGGISNPFGSLFLVLIALAALALPLRWAMAVAAACVSGYLVSAAFGLPLPHNHFNPLTLHMWGMAANFLLS
TVMVLVFTTWLAQALHAREREISLLRERFTRNEGIIALATHAASVAHELNTPLATMTLLADDVAEQCQQLELCEDLETLR
ELLTQCRNRVLTLAAPADKLNVDIQVHNVLDQWQLMHPTIHLKHNEDAPLQLMLEPGVGHLIMVLLNNAADAGERSDRRQ
VDLNLHIQDGQLYGEVRDYGSGFETPQGLLPGMLFHTQKANSMGVGLALSHATVERLQGDIWMQPAKGRGTRVSFRVPLK
ETSTA
>Mature_405_residues
MHTSATSFLRTLCTLRWVATAGQVVTILMATHAMGLALPQGPLWAGVCTLALFNLYAQRRISHTHVTSPNIEFSHILVDV
TVLTWMVGWSGGISNPFGSLFLVLIALAALALPLRWAMAVAAACVSGYLVSAAFGLPLPHNHFNPLTLHMWGMAANFLLS
TVMVLVFTTWLAQALHAREREISLLRERFTRNEGIIALATHAASVAHELNTPLATMTLLADDVAEQCQQLELCEDLETLR
ELLTQCRNRVLTLAAPADKLNVDIQVHNVLDQWQLMHPTIHLKHNEDAPLQLMLEPGVGHLIMVLLNNAADAGERSDRRQ
VDLNLHIQDGQLYGEVRDYGSGFETPQGLLPGMLFHTQKANSMGVGLALSHATVERLQGDIWMQPAKGRGTRVSFRVPLK
ETSTA

Specific function: Member of the two-component regulatory system RegB/RegA. Involved in the positive regulation of photosynthesis gene expression in response to anaerobiosis. Also involved in positive regulation of the cbbI and cbbII Calvin cycle CO2 fixation operons, as we

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 44491; Mature: 44491

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTSATSFLRTLCTLRWVATAGQVVTILMATHAMGLALPQGPLWAGVCTLALFNLYAQRR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
ISHTHVTSPNIEFSHILVDVTVLTWMVGWSGGISNPFGSLFLVLIALAALALPLRWAMAV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AAACVSGYLVSAAFGLPLPHNHFNPLTLHMWGMAANFLLSTVMVLVFTTWLAQALHARER
HHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EISLLRERFTRNEGIIALATHAASVAHELNTPLATMTLLADDVAEQCQQLELCEDLETLR
HHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELLTQCRNRVLTLAAPADKLNVDIQVHNVLDQWQLMHPTIHLKHNEDAPLQLMLEPGVGH
HHHHHHHHCEEEEECCCCCCEEEEEEHHHHHHHHHHCCEEEEECCCCCCEEEEECCCCHH
LIMVLLNNAADAGERSDRRQVDLNLHIQDGQLYGEVRDYGSGFETPQGLLPGMLFHTQKA
HHHHHHHCCCCCCCCCCCEEEEEEEEEECCHHHHHHHHCCCCCCCCHHHCCHHHHCCCCC
NSMGVGLALSHATVERLQGDIWMQPAKGRGTRVSFRVPLKETSTA
CCCCCEEEHHHHHHHHHCCCEEECCCCCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MHTSATSFLRTLCTLRWVATAGQVVTILMATHAMGLALPQGPLWAGVCTLALFNLYAQRR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
ISHTHVTSPNIEFSHILVDVTVLTWMVGWSGGISNPFGSLFLVLIALAALALPLRWAMAV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AAACVSGYLVSAAFGLPLPHNHFNPLTLHMWGMAANFLLSTVMVLVFTTWLAQALHARER
HHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EISLLRERFTRNEGIIALATHAASVAHELNTPLATMTLLADDVAEQCQQLELCEDLETLR
HHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELLTQCRNRVLTLAAPADKLNVDIQVHNVLDQWQLMHPTIHLKHNEDAPLQLMLEPGVGH
HHHHHHHHCEEEEECCCCCCEEEEEEHHHHHHHHHHCCEEEEECCCCCCEEEEECCCCHH
LIMVLLNNAADAGERSDRRQVDLNLHIQDGQLYGEVRDYGSGFETPQGLLPGMLFHTQKA
HHHHHHHCCCCCCCCCCCEEEEEEEEEECCHHHHHHHHCCCCCCCCHHHCCHHHHCCCCC
NSMGVGLALSHATVERLQGDIWMQPAKGRGTRVSFRVPLKETSTA
CCCCCEEEHHHHHHHHHCCCEEECCCCCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7751278; 10358089 [H]