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The map label for this gene is pilA [H]

Identifier: 182682545

GI number: 182682545

Start: 2274352

End: 2274792

Strand: Direct

Name: pilA [H]

Synonym: XfasM23_2033

Alternate gene names: 182682545

Gene position: 2274352-2274792 (Clockwise)

Preceding gene: 182682543

Following gene: 182682546

Centisome position: 89.69

GC content: 53.51

Gene sequence:

>441_bases
ATGAAAAAGCAACAAGGCTTCACTTTGATCGAGCTGATGATCGTCATTGCGATCATCGCCATCCTGGCAGCGATCGCTCT
GCCCATGTACCAAAATTATGTCGCCAGGTCTCAAGTCGCAGCGGCACTAGCCGAGATCACACCGGGCCGAACACAAGCCG
AAATCCGTATGGCTGATGGACAGGCTTCAAACACTCCTAACGCTATTGGACTACGCAGCCCGACCACTCGTTGCAGCCTC
GTTGTGGTGGACATCACAACTACTGGCGGCGCAATCGTATGTACGATGATTGGTAATGGTCAGGTCAACAATCAAACTAT
CACCTTGACCCGCATCGCTGATAACAACGCAGGCCAAGGTGGCGTCAATACTGGGGGGAACTGGACCTGCACCACAACCG
CGCCTGCAGCGTTAACTCCAGCAGGCTGCACTGGAACTTAA

Upstream 100 bases:

>100_bases
TCACACTATTGGCACGCCTCCTGCTTAAGTCATCTTGCCAGTGCTGGACAACGCATTCAGCAACGCTGGATTTCTTACCA
ACGCTATTTAAGGATTCATC

Downstream 100 bases:

>100_bases
TTAACACCAGCAACAACACGATTCATGGGTAAATGCTCACATTCACCTAAGGTAATCGGTGTCAAGTAAGAAGCCCGCCA
TCATGGCGGGCTTCTTGGTC

Product: fimbrial protein pilin

Products: NA

Alternate protein names: Pilin [H]

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MKKQQGFTLIELMIVIAIIAILAAIALPMYQNYVARSQVAAALAEITPGRTQAEIRMADGQASNTPNAIGLRSPTTRCSL
VVVDITTTGGAIVCTMIGNGQVNNQTITLTRIADNNAGQGGVNTGGNWTCTTTAPAALTPAGCTGT

Sequences:

>Translated_146_residues
MKKQQGFTLIELMIVIAIIAILAAIALPMYQNYVARSQVAAALAEITPGRTQAEIRMADGQASNTPNAIGLRSPTTRCSL
VVVDITTTGGAIVCTMIGNGQVNNQTITLTRIADNNAGQGGVNTGGNWTCTTTAPAALTPAGCTGT
>Mature_146_residues
MKKQQGFTLIELMIVIAIIAILAAIALPMYQNYVARSQVAAALAEITPGRTQAEIRMADGQASNTPNAIGLRSPTTRCSL
VVVDITTTGGAIVCTMIGNGQVNNQTITLTRIADNNAGQGGVNTGGNWTCTTTAPAALTPAGCTGT

Specific function: Not Yet Known. [C]

COG id: COG4969

COG function: function code NU; Tfp pilus assembly protein, major pilin PilA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-Me-Phe pilin family [H]

Homologues:

Organism=Escherichia coli, GI1786297, Length=145, Percent_Identity=35.8620689655172, Blast_Score=70, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000983
- InterPro:   IPR001082
- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl; PF00114 Pilin [H]

EC number: NA

Molecular weight: Translated: 14977; Mature: 14977

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQQGFTLIELMIVIAIIAILAAIALPMYQNYVARSQVAAALAEITPGRTQAEIRMADG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC
QASNTPNAIGLRSPTTRCSLVVVDITTTGGAIVCTMIGNGQVNNQTITLTRIADNNAGQG
CCCCCCCEEECCCCCCEEEEEEEEEECCCCEEEEEEECCCEECCEEEEEEEEECCCCCCC
GVNTGGNWTCTTTAPAALTPAGCTGT
CCCCCCCEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKQQGFTLIELMIVIAIIAILAAIALPMYQNYVARSQVAAALAEITPGRTQAEIRMADG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC
QASNTPNAIGLRSPTTRCSLVVVDITTTGGAIVCTMIGNGQVNNQTITLTRIADNNAGQG
CCCCCCCEEECCCCCCEEEEEEEEEECCCCEEEEEEECCCEECCEEEEEEEEECCCCCCC
GVNTGGNWTCTTTAPAALTPAGCTGT
CCCCCCCEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7905475 [H]