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The map label for this gene is pilA [H]

Identifier: 182682543

GI number: 182682543

Start: 2272597

End: 2273043

Strand: Direct

Name: pilA [H]

Synonym: XfasM23_2031

Alternate gene names: 182682543

Gene position: 2272597-2273043 (Clockwise)

Preceding gene: 182682539

Following gene: 182682545

Centisome position: 89.62

GC content: 49.44

Gene sequence:

>447_bases
ATGAAAAAGCAACAAGGTTTTAACTTAATCGAACTAATGATCGTCATTGCAATCATTGCTGTTCTGGCGGCCATCGCTCT
GCCCATGTACCAAAATTATGTTGCCAGATCCCAAGTCACCGCGGGACTGGCTGACATTACACCGGGTAAGGTGCAAGCCG
AGTCTCTGATTGCTGATGGGAAGAGTACAACCAATGCGAGCGATATTGGACTGCGCACCGACACCACTCGTTGTGGGATT
ACCGTTAAAGTCGAAAACACCGGACTTGCCAACATCACATGTACGATTAAGGGCAATTCTCAGGTGAATGGTCAAACCAT
CGCTTGGAATCGTAGCGTCGATAACTCCGCGGGCACCAATGGCGCCAATAATGGAGGTCAGTGGACATGCAACACCACTG
TGACATCCGATGCACTGAGACCTTTCGGCTGCACTGCCGCTAAATAA

Upstream 100 bases:

>100_bases
TATCCAGTTTAACTGGCAGCGCAGCAATAAACCCCCACACATGAATTCTCTTCATCCATACGTTTAATGAGTGACCAAAC
TTTTTATTGAAGGTATACAC

Downstream 100 bases:

>100_bases
TGAATACACACAGCAACACGATCAATGCTGAGTGACCACGTTCGCCTAACGTGATAGATCCGGTGAGAAGCCCGCCTTGA
TGGCGGGCGCTTTGATAATA

Product: fimbrial protein pilin

Products: NA

Alternate protein names: Pilin [H]

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MKKQQGFNLIELMIVIAIIAVLAAIALPMYQNYVARSQVTAGLADITPGKVQAESLIADGKSTTNASDIGLRTDTTRCGI
TVKVENTGLANITCTIKGNSQVNGQTIAWNRSVDNSAGTNGANNGGQWTCNTTVTSDALRPFGCTAAK

Sequences:

>Translated_148_residues
MKKQQGFNLIELMIVIAIIAVLAAIALPMYQNYVARSQVTAGLADITPGKVQAESLIADGKSTTNASDIGLRTDTTRCGI
TVKVENTGLANITCTIKGNSQVNGQTIAWNRSVDNSAGTNGANNGGQWTCNTTVTSDALRPFGCTAAK
>Mature_148_residues
MKKQQGFNLIELMIVIAIIAVLAAIALPMYQNYVARSQVTAGLADITPGKVQAESLIADGKSTTNASDIGLRTDTTRCGI
TVKVENTGLANITCTIKGNSQVNGQTIAWNRSVDNSAGTNGANNGGQWTCNTTVTSDALRPFGCTAAK

Specific function: Not Yet Known. [C]

COG id: COG4969

COG function: function code NU; Tfp pilus assembly protein, major pilin PilA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-Me-Phe pilin family [H]

Homologues:

Organism=Escherichia coli, GI1786297, Length=140, Percent_Identity=34.2857142857143, Blast_Score=74, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000983
- InterPro:   IPR001082
- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl; PF00114 Pilin [H]

EC number: NA

Molecular weight: Translated: 15449; Mature: 15449

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQQGFNLIELMIVIAIIAVLAAIALPMYQNYVARSQVTAGLADITPGKVQAESLIADG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHCCC
KSTTNASDIGLRTDTTRCGITVKVENTGLANITCTIKGNSQVNGQTIAWNRSVDNSAGTN
CCCCCCCCCCEECCCCCCCEEEEECCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCC
GANNGGQWTCNTTVTSDALRPFGCTAAK
CCCCCCCEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKQQGFNLIELMIVIAIIAVLAAIALPMYQNYVARSQVTAGLADITPGKVQAESLIADG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHCCC
KSTTNASDIGLRTDTTRCGITVKVENTGLANITCTIKGNSQVNGQTIAWNRSVDNSAGTN
CCCCCCCCCCEECCCCCCCEEEEECCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCC
GANNGGQWTCNTTVTSDALRPFGCTAAK
CCCCCCCEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7905475 [H]