Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182682535
Identifier: 182682535
GI number: 182682535
Start: 2264164
End: 2264442
Strand: Direct
Name: 182682535
Synonym: XfasM23_2022
Alternate gene names: NA
Gene position: 2264164-2264442 (Clockwise)
Preceding gene: 182682525
Following gene: 182682536
Centisome position: 89.29
GC content: 51.25
Gene sequence:
>279_bases ATGCCTGTCCCTGTCTTCCTGCAATCCAACCATTTCCGATACTTGTTTGAACCACGCAAACCCCGCCATCCCATAGCGCG ACTTATGGCAAGCACCGCAGGTCTTACCATTTTGATAGCTCTTGTGTTATTCAGTGTTTTCGTTGGCGCAGCAATGGTTC TTGGAGGAGTCGCATGGAAACTATTAGTGGGTCAGCGTCGGCGTACTCATGCTGAAGTTGGCACACAGACTATCGAAGGG AAGTACCGCGTCATTCACAAGCCCGATGCCCCACTGTGA
Upstream 100 bases:
>100_bases GAGATGATGCTATAAGCGAACGCTTATTAACATTTTCTTCACTCAGCGGCATTAGATGACCACCATACTAGGGTTGTTCC AGAGGTAATCTATATCTTCT
Downstream 100 bases:
>100_bases AGTTAACAGTCTACTTTTACCAAATTCTAGGAACCAGCTGGATGCGGTACAACACCGGTTGTTTCATGATTGATTTTGAC TTCAGACCGCTGTTTAGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MPVPVFLQSNHFRYLFEPRKPRHPIARLMASTAGLTILIALVLFSVFVGAAMVLGGVAWKLLVGQRRRTHAEVGTQTIEG KYRVIHKPDAPL
Sequences:
>Translated_92_residues MPVPVFLQSNHFRYLFEPRKPRHPIARLMASTAGLTILIALVLFSVFVGAAMVLGGVAWKLLVGQRRRTHAEVGTQTIEG KYRVIHKPDAPL >Mature_91_residues PVPVFLQSNHFRYLFEPRKPRHPIARLMASTAGLTILIALVLFSVFVGAAMVLGGVAWKLLVGQRRRTHAEVGTQTIEGK YRVIHKPDAPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10259; Mature: 10128
Theoretical pI: Translated: 11.82; Mature: 11.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVPVFLQSNHFRYLFEPRKPRHPIARLMASTAGLTILIALVLFSVFVGAAMVLGGVAWK CCCCEEEECCCEEEEECCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH LLVGQRRRTHAEVGTQTIEGKYRVIHKPDAPL HHHCCHHHHHHHHCCEECCCCEEEEECCCCCC >Mature Secondary Structure PVPVFLQSNHFRYLFEPRKPRHPIARLMASTAGLTILIALVLFSVFVGAAMVLGGVAWK CCCEEEECCCEEEEECCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH LLVGQRRRTHAEVGTQTIEGKYRVIHKPDAPL HHHCCHHHHHHHHCCEECCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA