Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is ftsI [H]
Identifier: 182682487
GI number: 182682487
Start: 2215309
End: 2217150
Strand: Reverse
Name: ftsI [H]
Synonym: XfasM23_1974
Alternate gene names: 182682487
Gene position: 2217150-2215309 (Counterclockwise)
Preceding gene: 182682488
Following gene: 182682486
Centisome position: 87.44
GC content: 54.13
Gene sequence:
>1842_bases ATGAAGAACCGTAATAACCGCTTCCGCAGTCATTTCAATTTGCGTGGTCGGTTGTTGCTGGTCGGTACAGCGCTGGGCCT GTGTTCAATGACGTTGATCGCCAGTGCTGCCTACGTGCAGTTGATTAATAGTGATTTCTATCAGCGTCAGGCCCAAGCGC GCTACTTGCGTGAGCTACCGATTCCGACCTCGCGTGGAATGATTACAGATCGCAATGGTGAGCCGTTGGCGGTTTCTACG CCGGTCGAGTCGATTTGGGGAAATCCACAGGAACTATTGCGGAATCCTGATGCCATCTCGAAGTTGGCCAAGGTACTTGA TGTCCCGATGGAAGAACTGCGTACTCGTTTGTTGCAGAAGGCCGATAAAGAGTTCATGTATTTGAAGCGCCGGATCAATC CTGACGTTGCACATCACGTTCTTGGGTTGCAAATTCCTGGGGTATTCGCGCAGCGTGAATTCAGGCGTTTCTACCCTCAG AGTGAGGCAATGGCGCATGTATTGGGTTTTACCAATATTGATGACCGTGGCCAGGAAGGTCTGGAGCTGTCATTTGATGA TTGGTTGACAGGTAAGCCTGGTAGCAAGCGTGTGGTACGTGATGCGCGTGGCGCGATTGTGGAGAGTGTGGATGCGATCC GGTCGGCACAGCCGGGTAAGGATTTGGTGTTGACGATTGATCGTCGTATTCAATTTCTTGCTTATAAGGAACTGCGCAAC GCCATTATTGAAAATCAAGCGGCTGGCGGTTCGATTGTCGTCATGGATGTGAACAATGGCGAGATTTTAGCCATGGTCAA TTTGCCGACCTACAACCCTAACGCGGTGAACGGGATTAATTCTTCAGCACGGCGTAATCGTGCGGTGACGGATCTGGTTG AGCCAGGTTCGACGATGAAGCCGTTGACGGTTGCGACCGCGCTGCAAGCGGGTGTGGTGACCCCTGATACGGTCATTGAT ACCAATCCTGGTTATCTGTCACTGGGACGTTTTACCATCCGCGATGTGCCGCGTAATAACGGTGTGCTCAATGTGACTGG TGTGATTACGCGCAGTTCCAATATTGGTGCTGCCAAGATCGTCGCCAAGGTGCCGGACAAAACGTTCTACGAATTGGTGC AAGGTTTTGGTTACGGGACAGCGCCTCATAGCGGTTTTCCTGGTGAATCCAGCGGTGTGTTGCCTTTACCGGCACGTTGG AGCGGTACTTCCAAGACCACTATGTCTTACGGTTACGGTCTGTCTGTGACGCCGTTGCAAATTGCGCAGGCGTACGCGAC GTTGGGCAATGGCGGCAAGCTAGTCCCGCCGACGTTTGTGAAAGGCCATCATGCCGAGGCACGTCAAGTCGTTGATGCCA AGGTTGCACAGCAAGTGATTGGGATGATGGAAACGGTGGTCACACGTGGAGGGGCTAAGGCCGCGGCGATCCTTGGCTAC CATGTTGCTGGAAAGACGGGCACGGCGCGCAAAACGGGCGCTAATGGCTACGAATCCGGTCATTACAATGCGCTGTTTGC TGGTTTGGTACCTGCCACGCGCCCGCGTTTCGCCACGGTCATTGTGATCAACGATCCGCAGGGTAAGGCGTATTACGGTG GCTTGGTATCTGCACCCGTGTTCCATCGGGTGATGGAGGGGGCGCTACGGTTGATGGATGTGCCTCCTGACGACATTCAA TCATGGTTGGCTGCGCAGGCTGCAGGAAAAACTGGGCGGACGCCACCGCGGCAGGTCGATCCCGATCCGGCATTAGTACC CGATGCTGCCGATGAGGTCGCCGCTGGTATTCCTACGACGGTGACACCATCGCCGTCTGCGATTCATAGAGATCGCCAAT GA
Upstream 100 bases:
>100_bases AGCAAGCGACGTGGGCCGAAGCCAATCGGGTTGATCAGGTTGCACGTGAGCGCTTAGGGATGAGATTCCCGGAAAGCAAA GAGATCGTTGTGGTGCGTCC
Downstream 100 bases:
>100_bases GGCGTTCTATGCCATTGGCGCAGCTATTGCCCGATATTCCGCAAGCGCGTGATGTCGTGATCTCTGGTTTGGTGATGGAT AGCCGTGAGGTGCAGCCGGG
Product: peptidoglycan glycosyltransferase
Products: NA
Alternate protein names: Penicillin-binding protein 3; PBP-3; Peptidoglycan glycosyltransferase 3 [H]
Number of amino acids: Translated: 613; Mature: 613
Protein sequence:
>613_residues MKNRNNRFRSHFNLRGRLLLVGTALGLCSMTLIASAAYVQLINSDFYQRQAQARYLRELPIPTSRGMITDRNGEPLAVST PVESIWGNPQELLRNPDAISKLAKVLDVPMEELRTRLLQKADKEFMYLKRRINPDVAHHVLGLQIPGVFAQREFRRFYPQ SEAMAHVLGFTNIDDRGQEGLELSFDDWLTGKPGSKRVVRDARGAIVESVDAIRSAQPGKDLVLTIDRRIQFLAYKELRN AIIENQAAGGSIVVMDVNNGEILAMVNLPTYNPNAVNGINSSARRNRAVTDLVEPGSTMKPLTVATALQAGVVTPDTVID TNPGYLSLGRFTIRDVPRNNGVLNVTGVITRSSNIGAAKIVAKVPDKTFYELVQGFGYGTAPHSGFPGESSGVLPLPARW SGTSKTTMSYGYGLSVTPLQIAQAYATLGNGGKLVPPTFVKGHHAEARQVVDAKVAQQVIGMMETVVTRGGAKAAAILGY HVAGKTGTARKTGANGYESGHYNALFAGLVPATRPRFATVIVINDPQGKAYYGGLVSAPVFHRVMEGALRLMDVPPDDIQ SWLAAQAAGKTGRTPPRQVDPDPALVPDAADEVAAGIPTTVTPSPSAIHRDRQ
Sequences:
>Translated_613_residues MKNRNNRFRSHFNLRGRLLLVGTALGLCSMTLIASAAYVQLINSDFYQRQAQARYLRELPIPTSRGMITDRNGEPLAVST PVESIWGNPQELLRNPDAISKLAKVLDVPMEELRTRLLQKADKEFMYLKRRINPDVAHHVLGLQIPGVFAQREFRRFYPQ SEAMAHVLGFTNIDDRGQEGLELSFDDWLTGKPGSKRVVRDARGAIVESVDAIRSAQPGKDLVLTIDRRIQFLAYKELRN AIIENQAAGGSIVVMDVNNGEILAMVNLPTYNPNAVNGINSSARRNRAVTDLVEPGSTMKPLTVATALQAGVVTPDTVID TNPGYLSLGRFTIRDVPRNNGVLNVTGVITRSSNIGAAKIVAKVPDKTFYELVQGFGYGTAPHSGFPGESSGVLPLPARW SGTSKTTMSYGYGLSVTPLQIAQAYATLGNGGKLVPPTFVKGHHAEARQVVDAKVAQQVIGMMETVVTRGGAKAAAILGY HVAGKTGTARKTGANGYESGHYNALFAGLVPATRPRFATVIVINDPQGKAYYGGLVSAPVFHRVMEGALRLMDVPPDDIQ SWLAAQAAGKTGRTPPRQVDPDPALVPDAADEVAAGIPTTVTPSPSAIHRDRQ >Mature_613_residues MKNRNNRFRSHFNLRGRLLLVGTALGLCSMTLIASAAYVQLINSDFYQRQAQARYLRELPIPTSRGMITDRNGEPLAVST PVESIWGNPQELLRNPDAISKLAKVLDVPMEELRTRLLQKADKEFMYLKRRINPDVAHHVLGLQIPGVFAQREFRRFYPQ SEAMAHVLGFTNIDDRGQEGLELSFDDWLTGKPGSKRVVRDARGAIVESVDAIRSAQPGKDLVLTIDRRIQFLAYKELRN AIIENQAAGGSIVVMDVNNGEILAMVNLPTYNPNAVNGINSSARRNRAVTDLVEPGSTMKPLTVATALQAGVVTPDTVID TNPGYLSLGRFTIRDVPRNNGVLNVTGVITRSSNIGAAKIVAKVPDKTFYELVQGFGYGTAPHSGFPGESSGVLPLPARW SGTSKTTMSYGYGLSVTPLQIAQAYATLGNGGKLVPPTFVKGHHAEARQVVDAKVAQQVIGMMETVVTRGGAKAAAILGY HVAGKTGTARKTGANGYESGHYNALFAGLVPATRPRFATVIVINDPQGKAYYGGLVSAPVFHRVMEGALRLMDVPPDDIQ SWLAAQAAGKTGRTPPRQVDPDPALVPDAADEVAAGIPTTVTPSPSAIHRDRQ
Specific function: Cell wall formation. Essential for the formation of a septum of the murein sacculus. Synthesis of cross-linked peptidoglycan from the lipid intermediates [H]
COG id: COG0768
COG function: function code M; Cell division protein FtsI/penicillin-binding protein 2
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side. Note=The bulk of the molecule, except for the N-terminal membrane anchor region, protrudes into the periplasmic space, where it acts on murein (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transpeptidase family [H]
Homologues:
Organism=Escherichia coli, GI1786272, Length=581, Percent_Identity=42.6850258175559, Blast_Score=458, Evalue=1e-130, Organism=Escherichia coli, GI1786854, Length=587, Percent_Identity=25.2129471890971, Blast_Score=142, Evalue=6e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR005311 - InterPro: IPR001460 [H]
Pfam domain/function: PF03717 PBP_dimer; PF00905 Transpeptidase [H]
EC number: =2.4.1.129 [H]
Molecular weight: Translated: 66182; Mature: 66182
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNRNNRFRSHFNLRGRLLLVGTALGLCSMTLIASAAYVQLINSDFYQRQAQARYLRELP CCCCCCHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IPTSRGMITDRNGEPLAVSTPVESIWGNPQELLRNPDAISKLAKVLDVPMEELRTRLLQK CCCCCCEEECCCCCCEEEECCHHHHCCCHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHH ADKEFMYLKRRINPDVAHHVLGLQIPGVFAQREFRRFYPQSEAMAHVLGFTNIDDRGQEG HHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCC LELSFDDWLTGKPGSKRVVRDARGAIVESVDAIRSAQPGKDLVLTIDRRIQFLAYKELRN CEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHH AIIENQAAGGSIVVMDVNNGEILAMVNLPTYNPNAVNGINSSARRNRAVTDLVEPGSTMK HHHHCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHCCCHHHHHCCCCCCC PLTVATALQAGVVTPDTVIDTNPGYLSLGRFTIRDVPRNNGVLNVTGVITRSSNIGAAKI CHHHHHHHHCCCCCCCCEEECCCCEEEECCEEEEECCCCCCEEEEEEEEEECCCCCHHHH VAKVPDKTFYELVQGFGYGTAPHSGFPGESSGVLPLPARWSGTSKTTMSYGYGLSVTPLQ EEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEECCCCCCCCHHH IAQAYATLGNGGKLVPPTFVKGHHAEARQVVDAKVAQQVIGMMETVVTRGGAKAAAILGY HHHHHHHHCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE HVAGKTGTARKTGANGYESGHYNALFAGLVPATRPRFATVIVINDPQGKAYYGGLVSAPV EECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEECCCCCEEECCHHHHHH FHRVMEGALRLMDVPPDDIQSWLAAQAAGKTGRTPPRQVDPDPALVPDAADEVAAGIPTT HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCC VTPSPSAIHRDRQ CCCCCHHHCCCCC >Mature Secondary Structure MKNRNNRFRSHFNLRGRLLLVGTALGLCSMTLIASAAYVQLINSDFYQRQAQARYLRELP CCCCCCHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC IPTSRGMITDRNGEPLAVSTPVESIWGNPQELLRNPDAISKLAKVLDVPMEELRTRLLQK CCCCCCEEECCCCCCEEEECCHHHHCCCHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHH ADKEFMYLKRRINPDVAHHVLGLQIPGVFAQREFRRFYPQSEAMAHVLGFTNIDDRGQEG HHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCC LELSFDDWLTGKPGSKRVVRDARGAIVESVDAIRSAQPGKDLVLTIDRRIQFLAYKELRN CEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHH AIIENQAAGGSIVVMDVNNGEILAMVNLPTYNPNAVNGINSSARRNRAVTDLVEPGSTMK HHHHCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHCCCHHHHHCCCCCCC PLTVATALQAGVVTPDTVIDTNPGYLSLGRFTIRDVPRNNGVLNVTGVITRSSNIGAAKI CHHHHHHHHCCCCCCCCEEECCCCEEEECCEEEEECCCCCCEEEEEEEEEECCCCCHHHH VAKVPDKTFYELVQGFGYGTAPHSGFPGESSGVLPLPARWSGTSKTTMSYGYGLSVTPLQ EEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEECCCCCCCCHHH IAQAYATLGNGGKLVPPTFVKGHHAEARQVVDAKVAQQVIGMMETVVTRGGAKAAAILGY HHHHHHHHCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE HVAGKTGTARKTGANGYESGHYNALFAGLVPATRPRFATVIVINDPQGKAYYGGLVSAPV EECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEECCCCCEEECCHHHHHH FHRVMEGALRLMDVPPDDIQSWLAAQAAGKTGRTPPRQVDPDPALVPDAADEVAAGIPTT HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCC VTPSPSAIHRDRQ CCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]