Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182682474
Identifier: 182682474
GI number: 182682474
Start: 2201050
End: 2201490
Strand: Direct
Name: 182682474
Synonym: XfasM23_1961
Alternate gene names: NA
Gene position: 2201050-2201490 (Clockwise)
Preceding gene: 182682470
Following gene: 182682498
Centisome position: 86.8
GC content: 45.8
Gene sequence:
>441_bases ATGTCTAATCTGAAATCCAACGCTAACAGCCCTTCCCCCTTTCAGACCGCCATTGAAGCGGTACTGAATGAAAAAAACGT CTCCACCTTCCATCGGGCCATATGGCTCGATAGGCTGGATCATCAGCTGCGCTCCCATCTGCCAGAAACGCTGGCAAATC AATGCCGATTGGCCAACGTCAATGGTAAAAAACTTGTTTTTCTGGTCGAATCACCTGCTTGGCACACAAAATTACGACTT TCCGAATCTCAGCTTCTAGACGCGGCCAAATCCATCGGACTCATGGCCACTCAGGTAAGCATCAAAACGTTAGCGTCTGC TTTACCCTTTACTAAAGAACGCGTAAAGGAAAAAAACGAAGCAGTTAATGCAACAATGCCTAAAGGCTTACAAGAAGCGT TAAAATCCCTTTATGGACCAATGCATCTGCAGAAAAACTGA
Upstream 100 bases:
>100_bases GTTCCTCTGAGAAGTCGCGGAACCGACGGACAGAGCACTCAAATCGGGTTTCATACGATTTAAGTTTGATTCTTCTTACT AATGCCATACGATTTTTTTC
Downstream 100 bases:
>100_bases AATCCGAGAACCGATGACTCCTTTACTTAATCGCAAAAATTTACGGCATTGGAACCACGCGACCTGGCGCATAGTAACTG GTATCGGCTCTTGATTCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MSNLKSNANSPSPFQTAIEAVLNEKNVSTFHRAIWLDRLDHQLRSHLPETLANQCRLANVNGKKLVFLVESPAWHTKLRL SESQLLDAAKSIGLMATQVSIKTLASALPFTKERVKEKNEAVNATMPKGLQEALKSLYGPMHLQKN
Sequences:
>Translated_146_residues MSNLKSNANSPSPFQTAIEAVLNEKNVSTFHRAIWLDRLDHQLRSHLPETLANQCRLANVNGKKLVFLVESPAWHTKLRL SESQLLDAAKSIGLMATQVSIKTLASALPFTKERVKEKNEAVNATMPKGLQEALKSLYGPMHLQKN >Mature_145_residues SNLKSNANSPSPFQTAIEAVLNEKNVSTFHRAIWLDRLDHQLRSHLPETLANQCRLANVNGKKLVFLVESPAWHTKLRLS ESQLLDAAKSIGLMATQVSIKTLASALPFTKERVKEKNEAVNATMPKGLQEALKSLYGPMHLQKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16256; Mature: 16125
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLKSNANSPSPFQTAIEAVLNEKNVSTFHRAIWLDRLDHQLRSHLPETLANQCRLANV CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHCEECCC NGKKLVFLVESPAWHTKLRLSESQLLDAAKSIGLMATQVSIKTLASALPFTKERVKEKNE CCCEEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH AVNATMPKGLQEALKSLYGPMHLQKN HHCCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SNLKSNANSPSPFQTAIEAVLNEKNVSTFHRAIWLDRLDHQLRSHLPETLANQCRLANV CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHCEECCC NGKKLVFLVESPAWHTKLRLSESQLLDAAKSIGLMATQVSIKTLASALPFTKERVKEKNE CCCEEEEEECCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH AVNATMPKGLQEALKSLYGPMHLQKN HHCCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA