Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is estA [H]
Identifier: 182682498
GI number: 182682498
Start: 2224015
End: 2225808
Strand: Direct
Name: estA [H]
Synonym: XfasM23_1985
Alternate gene names: 182682498
Gene position: 2224015-2225808 (Clockwise)
Preceding gene: 182682474
Following gene: 182682507
Centisome position: 87.71
GC content: 54.96
Gene sequence:
>1794_bases ATGACCTCCAATTTCACACGCTCCCTCCTCGCCTTTGCCATCACGTTGACAACCACACAGGGCATCGCGAAACCAGCCTT TCAACAAACCATCTTTTTCGGCGACAGCCTGAGTGACAGCGGCTACTACCGCCCGCTCCTACCGAACGAAATACAAGCCA TCACCGGCAAATTCACCACCAACCCCGGCTGGGTCTGGTCTGAATACGTTGCCAGCTATTATGGAAGCAATGCCTCCCCC AATGGCAACAGCCAAAGCGGCAACAATTACGCCGCTGGTGGCGCACACATAAATGAACCTTCAATCAGCATATTGGGCGA AGCACCATCACTAACATCTCAAACGAACGCCTATCTCAGTGCTCATGGGGGCAAGGCTGATCCAAGCGCGCTATACACCC TCTGGGGTGGCGCTAACGACCTGCTCGACACGTTAACAACTCCAGAACAAATACACACCATCATCGGCAATGCAACCACC GCAGAAATAAGCCTGGTGAGCACATTGAAAAATGCTGGCGCACATTACATCCTAGTCGCAGCAATCCCTGATCTTGGTTT GGCACCTCGCGCCCGAAACACAGGGACCACCGCGCAAAGCACTGCTGCGGCCACCGCCTATAACACAACACTATTCACTG CCCTGAAATCGGCAGGGTTGCAGGTCATCCCGATCGACACCTTCCACTTATTACAGGAATTAATCACCTCACCGGCAACC TACGGCTTCAGCAACACCACCGACACGGCATGCACCCTACAATTGCCACTGTGCAACCCCACGACCCTGGTCGACGCAAA TGCACCCAACACCTATGCATTCGCCGATGACATCCACCCAACCACCGCAGCACACCACATGTTGGGCCAGTACGCGATTT CAATCTTGGAAGCGCCACGGCTCCAGCAAGTGCTGACACGCTCGGCTCAAGGGATCGCCCGCGCCCGCGCCTACCAAGTT GCCTGGCATCTGGACGGCACACCGCAGCAGGATGGCCTGCACTGGTGGGGCAGCATGCGCAGCGACTCACAGCGCAATGA CAGTAACGACCTGTACAAAAGCGTTGCACCGGCCGGCCTCTTCGGATTTGACTGGCACAGCGGCCAAATCGTGTCCGGTG GCTTTATCGGCTACGGACGTATGCATGCCGACTTCAGCAATGGAAACGGCACCTTCAAGCAAAAAGACACCACCTTGGGC GGCTTTTCAGGCTGGTATACCGGTCCCGTCTGGGTCAATGCCCAAATCAGTTACACCTTGCTGAACTACGACATCAAACG CGAAGTACAACTCGGTCCAGCCACACGGATACACCGTGGTTCCCCCAATGGCAGCAACCTGACCGTTGCACTGAATGCCA GTTACGAGATGGGCGAAGGTCGGCTGCGCTATGGCTCAGTGGCTGGACTGACCTGGCAAAAAACCAAATTGGAAAGCTAC ACCGAACAAAACGCCAGCAGCACCGCGCTGGGTTATGCCGATCAGCAACTCAACTCACTGCTTGGGCGCGTCGGCTTGCA GATGCGACTGGAAGGAAACGTCGTCACCCCGTACTTACAGGTGACCTACGATCACGAATTCAAGAAACAACAAAACCAAG CCAATGCATGGCTGCAAACCATGCCAGAAGCGGGTATCTATTCCGTGCCGGGACTGACATTCAATCGCAACTACGCCAGC ATCGTACTCGGTGCACGCACCAAAATTGGACATCTACAGAGCAACGTTGGCCTCACCACCAGTACAGAGAAGAACGCACG CGATGTCACGTTATTCGTCAACGGCAATTTTTAA
Upstream 100 bases:
>100_bases TTCCATCAAGAACAAATTATGAACAATAACCACATACACTACTCAACATACCCATTGGTTGCAGCACCCACCGTCAATTT TTGAATAAAACACCCTCATC
Downstream 100 bases:
>100_bases AATACCGCCAGTCTATGCAACAACACACCTTCGAGGTAACCACCGAACTCCCGTCGTTGCCTCCATAGTCAAGGAAGCAT AGACTGCCGGGCGTACCGCA
Product: outer membrane autotransporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 597; Mature: 596
Protein sequence:
>597_residues MTSNFTRSLLAFAITLTTTQGIAKPAFQQTIFFGDSLSDSGYYRPLLPNEIQAITGKFTTNPGWVWSEYVASYYGSNASP NGNSQSGNNYAAGGAHINEPSISILGEAPSLTSQTNAYLSAHGGKADPSALYTLWGGANDLLDTLTTPEQIHTIIGNATT AEISLVSTLKNAGAHYILVAAIPDLGLAPRARNTGTTAQSTAAATAYNTTLFTALKSAGLQVIPIDTFHLLQELITSPAT YGFSNTTDTACTLQLPLCNPTTLVDANAPNTYAFADDIHPTTAAHHMLGQYAISILEAPRLQQVLTRSAQGIARARAYQV AWHLDGTPQQDGLHWWGSMRSDSQRNDSNDLYKSVAPAGLFGFDWHSGQIVSGGFIGYGRMHADFSNGNGTFKQKDTTLG GFSGWYTGPVWVNAQISYTLLNYDIKREVQLGPATRIHRGSPNGSNLTVALNASYEMGEGRLRYGSVAGLTWQKTKLESY TEQNASSTALGYADQQLNSLLGRVGLQMRLEGNVVTPYLQVTYDHEFKKQQNQANAWLQTMPEAGIYSVPGLTFNRNYAS IVLGARTKIGHLQSNVGLTTSTEKNARDVTLFVNGNF
Sequences:
>Translated_597_residues MTSNFTRSLLAFAITLTTTQGIAKPAFQQTIFFGDSLSDSGYYRPLLPNEIQAITGKFTTNPGWVWSEYVASYYGSNASP NGNSQSGNNYAAGGAHINEPSISILGEAPSLTSQTNAYLSAHGGKADPSALYTLWGGANDLLDTLTTPEQIHTIIGNATT AEISLVSTLKNAGAHYILVAAIPDLGLAPRARNTGTTAQSTAAATAYNTTLFTALKSAGLQVIPIDTFHLLQELITSPAT YGFSNTTDTACTLQLPLCNPTTLVDANAPNTYAFADDIHPTTAAHHMLGQYAISILEAPRLQQVLTRSAQGIARARAYQV AWHLDGTPQQDGLHWWGSMRSDSQRNDSNDLYKSVAPAGLFGFDWHSGQIVSGGFIGYGRMHADFSNGNGTFKQKDTTLG GFSGWYTGPVWVNAQISYTLLNYDIKREVQLGPATRIHRGSPNGSNLTVALNASYEMGEGRLRYGSVAGLTWQKTKLESY TEQNASSTALGYADQQLNSLLGRVGLQMRLEGNVVTPYLQVTYDHEFKKQQNQANAWLQTMPEAGIYSVPGLTFNRNYAS IVLGARTKIGHLQSNVGLTTSTEKNARDVTLFVNGNF >Mature_596_residues TSNFTRSLLAFAITLTTTQGIAKPAFQQTIFFGDSLSDSGYYRPLLPNEIQAITGKFTTNPGWVWSEYVASYYGSNASPN GNSQSGNNYAAGGAHINEPSISILGEAPSLTSQTNAYLSAHGGKADPSALYTLWGGANDLLDTLTTPEQIHTIIGNATTA EISLVSTLKNAGAHYILVAAIPDLGLAPRARNTGTTAQSTAAATAYNTTLFTALKSAGLQVIPIDTFHLLQELITSPATY GFSNTTDTACTLQLPLCNPTTLVDANAPNTYAFADDIHPTTAAHHMLGQYAISILEAPRLQQVLTRSAQGIARARAYQVA WHLDGTPQQDGLHWWGSMRSDSQRNDSNDLYKSVAPAGLFGFDWHSGQIVSGGFIGYGRMHADFSNGNGTFKQKDTTLGG FSGWYTGPVWVNAQISYTLLNYDIKREVQLGPATRIHRGSPNGSNLTVALNASYEMGEGRLRYGSVAGLTWQKTKLESYT EQNASSTALGYADQQLNSLLGRVGLQMRLEGNVVTPYLQVTYDHEFKKQQNQANAWLQTMPEAGIYSVPGLTFNRNYASI VLGARTKIGHLQSNVGLTTSTEKNARDVTLFVNGNF
Specific function: Unknown
COG id: COG3240
COG function: function code IR; Phospholipase/lecithinase/hemolysin
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005546 - InterPro: IPR013830 - InterPro: IPR013831 - InterPro: IPR017186 - InterPro: IPR001087 - InterPro: IPR008265 - InterPro: IPR006315 [H]
Pfam domain/function: PF03797 Autotransporter; PF00657 Lipase_GDSL [H]
EC number: =3.1.1.1 [H]
Molecular weight: Translated: 64345; Mature: 64214
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSNFTRSLLAFAITLTTTQGIAKPAFQQTIFFGDSLSDSGYYRPLLPNEIQAITGKFTT CCCHHHHHHHHHEEEEECCCCCCCHHHHHEEEECCCCCCCCCCCCCCCCCHHHEECEEEC NPGWVWSEYVASYYGSNASPNGNSQSGNNYAAGGAHINEPSISILGEAPSLTSQTNAYLS CCCCHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCEECCCCEEEEECCCCCCCCCCEEEE AHGGKADPSALYTLWGGANDLLDTLTTPEQIHTIIGNATTAEISLVSTLKNAGAHYILVA ECCCCCCCCEEEEEECCCHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEE AIPDLGLAPRARNTGTTAQSTAAATAYNTTLFTALKSAGLQVIPIDTFHLLQELITSPAT ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHCCCCC YGFSNTTDTACTLQLPLCNPTTLVDANAPNTYAFADDIHPTTAAHHMLGQYAISILEAPR CCCCCCCCCEEEEEEECCCCCEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCHH LQQVLTRSAQGIARARAYQVAWHLDGTPQQDGLHWWGSMRSDSQRNDSNDLYKSVAPAGL HHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCEEECCCCCCCCCCCCHHHHHHHCCCCE FGFDWHSGQIVSGGFIGYGRMHADFSNGNGTFKQKDTTLGGFSGWYTGPVWVNAQISYTL EEEECCCCEEEECCEEEECEEEEEECCCCCCEEECCCCCCCCCCCCCCCEEEEEEEEEEE LNYDIKREVQLGPATRIHRGSPNGSNLTVALNASYEMGEGRLRYGSVAGLTWQKTKLESY EEECEEEEEECCCCCEEECCCCCCCEEEEEEECCEECCCCEEEECEEECCEEEHHHHHHH TEQNASSTALGYADQQLNSLLGRVGLQMRLEGNVVTPYLQVTYDHEFKKQQNQANAWLQT HHCCCCCCEECCHHHHHHHHHHHCCEEEEECCCEECCEEEEEECCHHHHHHHHHHHHHHH MPEAGIYSVPGLTFNRNYASIVLGARTKIGHLQSNVGLTTSTEKNARDVTLFVNGNF CCCCCCEECCCEEECCCEEEEEEECCCHHHHHHCCCCCEECCCCCCCEEEEEEECCC >Mature Secondary Structure TSNFTRSLLAFAITLTTTQGIAKPAFQQTIFFGDSLSDSGYYRPLLPNEIQAITGKFTT CCHHHHHHHHHEEEEECCCCCCCHHHHHEEEECCCCCCCCCCCCCCCCCHHHEECEEEC NPGWVWSEYVASYYGSNASPNGNSQSGNNYAAGGAHINEPSISILGEAPSLTSQTNAYLS CCCCHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCEECCCCEEEEECCCCCCCCCCEEEE AHGGKADPSALYTLWGGANDLLDTLTTPEQIHTIIGNATTAEISLVSTLKNAGAHYILVA ECCCCCCCCEEEEEECCCHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEE AIPDLGLAPRARNTGTTAQSTAAATAYNTTLFTALKSAGLQVIPIDTFHLLQELITSPAT ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHCCCCC YGFSNTTDTACTLQLPLCNPTTLVDANAPNTYAFADDIHPTTAAHHMLGQYAISILEAPR CCCCCCCCCEEEEEEECCCCCEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCHH LQQVLTRSAQGIARARAYQVAWHLDGTPQQDGLHWWGSMRSDSQRNDSNDLYKSVAPAGL HHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCEEECCCCCCCCCCCCHHHHHHHCCCCE FGFDWHSGQIVSGGFIGYGRMHADFSNGNGTFKQKDTTLGGFSGWYTGPVWVNAQISYTL EEEECCCCEEEECCEEEECEEEEEECCCCCCEEECCCCCCCCCCCCCCCEEEEEEEEEEE LNYDIKREVQLGPATRIHRGSPNGSNLTVALNASYEMGEGRLRYGSVAGLTWQKTKLESY EEECEEEEEECCCCCEEECCCCCCCEEEEEEECCEECCCCEEEECEEECCEEEHHHHHHH TEQNASSTALGYADQQLNSLLGRVGLQMRLEGNVVTPYLQVTYDHEFKKQQNQANAWLQT HHCCCCCCEECCHHHHHHHHHHHCCEEEEECCCEECCEEEEEECCHHHHHHHHHHHHHHH MPEAGIYSVPGLTFNRNYASIVLGARTKIGHLQSNVGLTTSTEKNARDVTLFVNGNF CCCCCCEECCCEEECCCEEEEEEECCCHHHHHHCCCCCEECCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10559163; 10984043 [H]