Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682456
Identifier: 182682456
GI number: 182682456
Start: 2174128
End: 2174760
Strand: Direct
Name: 182682456
Synonym: XfasM23_1943
Alternate gene names: NA
Gene position: 2174128-2174760 (Clockwise)
Preceding gene: 182682455
Following gene: 182682458
Centisome position: 85.74
GC content: 56.56
Gene sequence:
>633_bases ATGTTCCTGAGCTGGCGCAGCGCAACACGCTCCACGGCCGATGTGTCCTCCATCGCACAACAAATGGACACGTCGCATGG ACTCCACAGCAATCATCGCCACCCAAGCAAGCCTATCCCGTGCAGTACAGTCACACGAAGCACAAAACTAAAGAACATTA GGAACATTCACAGCCGCAGATACAGCGCACCTCACGCGTTCATCCCATCGCTATCATTAGCGGCTACCATCCCCGCTGCC AACACCCCCGCAGATGGCGTTGCAACACGTAGCACACACTCCTGCGCTTGCCGATACACACACGCAAAGCCCCACTGCGA TCTGGTCGCCAAACAGCACATCAAACGCAACGTGGCCCATCTGGCCAGCGCATCATCCTGCATGGATGCAGAGCACCCTC AGCAAGGCCGACTTAACCATGTCAACATCCGACCCCTATGGGTGCGGATGCCGCCAATCCCATTGGCGGCGTTGTTACAA CATAGGCATCTCAACGGAAGACATCCGTTTGCACACCGCAAGTGGCGCTGCATCACAACAATGCACTGCCCAACACATCG GGATGCCCAGCGGCAAAGAAACCCGCACCGTGGAAATTTTGCGATTGAAACACGCGGCGCAGCAAAGCCGTGA
Upstream 100 bases:
>100_bases CCAGATACCGGCGAACGTTACTTCTCCACCCCTCTGTTCGCTGACATCAATGAGCATTCAGACGACGCGTGGTTAGCCAG TCTCGGCTGAACACAGCAGA
Downstream 100 bases:
>100_bases CTGATGCCGAGGCTGAATACTTCAATTAGCTCGGCGACAAAACGTCTGCCAAGCCGATGAGGTGTCATTGGAATATGGAT GCTTTTGTTAAGAAACTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MFLSWRSATRSTADVSSIAQQMDTSHGLHSNHRHPSKPIPCSTVTRSTKLKNIRNIHSRRYSAPHAFIPSLSLAATIPAA NTPADGVATRSTHSCACRYTHAKPHCDLVAKQHIKRNVAHLASASSCMDAEHPQQGRLNHVNIRPLWVRMPPIPLAALLQ HRHLNGRHPFAHRKWRCITTMHCPTHRDAQRQRNPHRGNFAIETRGAAKP
Sequences:
>Translated_210_residues MFLSWRSATRSTADVSSIAQQMDTSHGLHSNHRHPSKPIPCSTVTRSTKLKNIRNIHSRRYSAPHAFIPSLSLAATIPAA NTPADGVATRSTHSCACRYTHAKPHCDLVAKQHIKRNVAHLASASSCMDAEHPQQGRLNHVNIRPLWVRMPPIPLAALLQ HRHLNGRHPFAHRKWRCITTMHCPTHRDAQRQRNPHRGNFAIETRGAAKP >Mature_210_residues MFLSWRSATRSTADVSSIAQQMDTSHGLHSNHRHPSKPIPCSTVTRSTKLKNIRNIHSRRYSAPHAFIPSLSLAATIPAA NTPADGVATRSTHSCACRYTHAKPHCDLVAKQHIKRNVAHLASASSCMDAEHPQQGRLNHVNIRPLWVRMPPIPLAALLQ HRHLNGRHPFAHRKWRCITTMHCPTHRDAQRQRNPHRGNFAIETRGAAKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23540; Mature: 23540
Theoretical pI: Translated: 11.92; Mature: 11.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLSWRSATRSTADVSSIAQQMDTSHGLHSNHRHPSKPIPCSTVTRSTKLKNIRNIHSRR CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH YSAPHAFIPSLSLAATIPAANTPADGVATRSTHSCACRYTHAKPHCDLVAKQHIKRNVAH CCCCCHHCCCCHHEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH LASASSCMDAEHPQQGRLNHVNIRPLWVRMPPIPLAALLQHRHLNGRHPFAHRKWRCITT HHHHHHHHCCCCCCCCCCEEECCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCEEEEEE MHCPTHRDAQRQRNPHRGNFAIETRGAAKP EECCCCCHHHHHCCCCCCCEEEECCCCCCC >Mature Secondary Structure MFLSWRSATRSTADVSSIAQQMDTSHGLHSNHRHPSKPIPCSTVTRSTKLKNIRNIHSRR CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH YSAPHAFIPSLSLAATIPAANTPADGVATRSTHSCACRYTHAKPHCDLVAKQHIKRNVAH CCCCCHHCCCCHHEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH LASASSCMDAEHPQQGRLNHVNIRPLWVRMPPIPLAALLQHRHLNGRHPFAHRKWRCITT HHHHHHHHCCCCCCCCCCEEECCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCEEEEEE MHCPTHRDAQRQRNPHRGNFAIETRGAAKP EECCCCCHHHHHCCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA