Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is cysG
Identifier: 182682454
GI number: 182682454
Start: 2171663
End: 2173099
Strand: Direct
Name: cysG
Synonym: XfasM23_1941
Alternate gene names: 182682454
Gene position: 2171663-2173099 (Clockwise)
Preceding gene: 182682451
Following gene: 182682455
Centisome position: 85.64
GC content: 61.17
Gene sequence:
>1437_bases GTGACTGCCAACGTTCTGTTCCCCTTATTTGCCAACCTACACGACCGCGCCGTCCTGGTGGTCGGCGGCGGTAAGGTTGC AGAACGCAAGACAGAGGCATTACTCAAAGTGGGCGCCTTGCCGATTATCGGCGCCCCCTCTCTGACCGCATCGTTACAGC GCTGGGCCGAAACCGGTCGCATCACGTGGCGGCAAGGGACGTTTGAAAACAGCTGGCTGCAAGAAGATATTTGGTTGGTC ATCGCCGCCACCGATCAACCCGAGGTGAACCACGCCGCGGCGCGCGCAGCACATGCGCAACGGTTATTCGTCAACGTGGT CGACGACATTGCACTCTCCAACGTGCAGGTCCCGGCCGTGGTCGAACGCGGCCCGTTGCGGATCGCGATTTCTAGCGGCG GTGGCGCACCGATGGTGGCACGCTATCTGCGACAACAACTGGAAAGCCTCATTGACGATAGTTGGGGACGACTGACCACA CTGTTCGCGCAACGCCGCGACACTATCCGCGCCCGCTATCCAAACATAGAAGCACGCCGCCGCTTCTTTGAAACCCAACT CGCCGGCCCACTCCAACGATTGCTACGCAAGCAACGCCACGCAGAGGCCGAAGCAGTGCTGGAAGCAGCACTCGCCAAGA CTCCCCCCACGGAGTCCGGCAGCGTCACCCTGGTGGGCGCTGGCGCCGGCGACGCCGGGCTACTGACCTTAAATGCACTG CGCGCCTTGAATGAAGCCGACATCATCCTCTACGACCGCCTGGTCAGCGACACCGTGTTACAGATGGCACGGCGCGATGC GGAGCAGATCGAAGTAGGCAAATCCGCAACGGGCCACAGTGTGCGCCAAGAAGACATTCACACCCTGATGCTGCAACACG CCCGTGCTGGTCAGCGTGTCGTACGGCTGAAAGGTGGCGATCCATTCGTCTTCGGTCGTGGTGGCGAGGAACTGGAATTC TTACGTACCCACGGCATCCCCTATGAGGTCATCCCCGGAATCACCGCCGCCCTTGCCTGTGCCGCCTATGCGGGTATCCC CTTGACCCACCGCGACCACGCCCAATCGCTATGCCTGATCACCGCCCATTGCCAATCCTCCCTAGATACCCTGAACTGGG CTGCACTGGCACAAGAACGTCAAACGCTGGCGTTCTACATGGGCGTGGCGGGACTACCCACCATACAGCAACGCCTGTGT GAGGCTGGACGGACCGAAACAACGCCTTTTGCACTGATCGAAAATGGCGCACGCGCGCAACAGCGGGTGCTCACAGGAAC GCTGAAAACACTCGCGCACACCGCACAGACATACGCCGTGCGTCCCCCCGCACTGCTGATCCTCGGCGAAGTCACCGCGC TGGCCGAACACCTGCATTGGTTCGGCACCACACCATTATCTGCCCCATGCCCCCCACGCACGCATCCTATAAGCTGA
Upstream 100 bases:
>100_bases GAACTTAATAACTAACGGCTATTTTCCAACTGCCTGAAGTCATTTCCTGAGATTATCAACCAGGCACTACGGTCATGACC CCCGACCTCAACTCACTATC
Downstream 100 bases:
>100_bases TTCAAAGACACACGTATCTGTGTGTACATCCTCCCCGATTACTTCCACAGAGACCTTCATGACTATCTACAACACTATCC TGGACACGATTGGCCACACA
Product: uroporphyrin-III C-methyltransferase
Products: NA
Alternate protein names: Uroporphyrinogen-III C-methyltransferase; Urogen III methylase; SUMT; Uroporphyrinogen III methylase; UROM; Precorrin-2 dehydrogenase; Sirohydrochlorin ferrochelatase
Number of amino acids: Translated: 478; Mature: 477
Protein sequence:
>478_residues MTANVLFPLFANLHDRAVLVVGGGKVAERKTEALLKVGALPIIGAPSLTASLQRWAETGRITWRQGTFENSWLQEDIWLV IAATDQPEVNHAAARAAHAQRLFVNVVDDIALSNVQVPAVVERGPLRIAISSGGGAPMVARYLRQQLESLIDDSWGRLTT LFAQRRDTIRARYPNIEARRRFFETQLAGPLQRLLRKQRHAEAEAVLEAALAKTPPTESGSVTLVGAGAGDAGLLTLNAL RALNEADIILYDRLVSDTVLQMARRDAEQIEVGKSATGHSVRQEDIHTLMLQHARAGQRVVRLKGGDPFVFGRGGEELEF LRTHGIPYEVIPGITAALACAAYAGIPLTHRDHAQSLCLITAHCQSSLDTLNWAALAQERQTLAFYMGVAGLPTIQQRLC EAGRTETTPFALIENGARAQQRVLTGTLKTLAHTAQTYAVRPPALLILGEVTALAEHLHWFGTTPLSAPCPPRTHPIS
Sequences:
>Translated_478_residues MTANVLFPLFANLHDRAVLVVGGGKVAERKTEALLKVGALPIIGAPSLTASLQRWAETGRITWRQGTFENSWLQEDIWLV IAATDQPEVNHAAARAAHAQRLFVNVVDDIALSNVQVPAVVERGPLRIAISSGGGAPMVARYLRQQLESLIDDSWGRLTT LFAQRRDTIRARYPNIEARRRFFETQLAGPLQRLLRKQRHAEAEAVLEAALAKTPPTESGSVTLVGAGAGDAGLLTLNAL RALNEADIILYDRLVSDTVLQMARRDAEQIEVGKSATGHSVRQEDIHTLMLQHARAGQRVVRLKGGDPFVFGRGGEELEF LRTHGIPYEVIPGITAALACAAYAGIPLTHRDHAQSLCLITAHCQSSLDTLNWAALAQERQTLAFYMGVAGLPTIQQRLC EAGRTETTPFALIENGARAQQRVLTGTLKTLAHTAQTYAVRPPALLILGEVTALAEHLHWFGTTPLSAPCPPRTHPIS >Mature_477_residues TANVLFPLFANLHDRAVLVVGGGKVAERKTEALLKVGALPIIGAPSLTASLQRWAETGRITWRQGTFENSWLQEDIWLVI AATDQPEVNHAAARAAHAQRLFVNVVDDIALSNVQVPAVVERGPLRIAISSGGGAPMVARYLRQQLESLIDDSWGRLTTL FAQRRDTIRARYPNIEARRRFFETQLAGPLQRLLRKQRHAEAEAVLEAALAKTPPTESGSVTLVGAGAGDAGLLTLNALR ALNEADIILYDRLVSDTVLQMARRDAEQIEVGKSATGHSVRQEDIHTLMLQHARAGQRVVRLKGGDPFVFGRGGEELEFL RTHGIPYEVIPGITAALACAAYAGIPLTHRDHAQSLCLITAHCQSSLDTLNWAALAQERQTLAFYMGVAGLPTIQQRLCE AGRTETTPFALIENGARAQQRVLTGTLKTLAHTAQTYAVRPPALLILGEVTALAEHLHWFGTTPLSAPCPPRTHPIS
Specific function: Multifunctional enzyme that catalyzes the SAM-dependent methylation of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 and then position C-12 or C-18 to form trimethylpyrrocorphin 2. It also catalyzes the conversion of precorrin-2 into si
COG id: COG0007
COG function: function code H; Uroporphyrinogen-III methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin methyltransferase family
Homologues:
Organism=Escherichia coli, GI1789768, Length=457, Percent_Identity=45.7330415754923, Blast_Score=400, Evalue=1e-112, Organism=Saccharomyces cerevisiae, GI6322922, Length=243, Percent_Identity=34.9794238683128, Blast_Score=137, Evalue=3e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CYSG_XYLF2 (B2I985)
Other databases:
- EMBL: CP001011 - RefSeq: YP_001830614.1 - ProteinModelPortal: B2I985 - SMR: B2I985 - GeneID: 6203265 - GenomeReviews: CP001011_GR - KEGG: xfn:XfasM23_1941 - HOGENOM: HBG730212 - OMA: MCRRDAE - ProtClustDB: CLSK881271 - GO: GO:0005488 - HAMAP: MF_01646 - InterPro: IPR000878 - InterPro: IPR014777 - InterPro: IPR014776 - InterPro: IPR006366 - InterPro: IPR016040 - InterPro: IPR019478 - InterPro: IPR006367 - InterPro: IPR003043 - Gene3D: G3DSA:3.40.1010.10 - Gene3D: G3DSA:3.30.950.10 - Gene3D: G3DSA:3.40.50.720 - Gene3D: G3DSA:1.10.8.210 - TIGRFAMs: TIGR01469 - TIGRFAMs: TIGR01470
Pfam domain/function: PF10414 CysG_dimeriser; PF00590 TP_methylase; SSF53790 Cor/por_Metransf
EC number: =2.1.1.107; =1.3.1.76; =4.99.1.4
Molecular weight: Translated: 51958; Mature: 51827
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: PS00839 SUMT_1; PS00840 SUMT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTANVLFPLFANLHDRAVLVVGGGKVAERKTEALLKVGALPIIGAPSLTASLQRWAETGR CCCCCHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHCCC ITWRQGTFENSWLQEDIWLVIAATDQPEVNHAAARAAHAQRLFVNVVDDIALSNVQVPAV EEEECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE VERGPLRIAISSGGGAPMVARYLRQQLESLIDDSWGRLTTLFAQRRDTIRARYPNIEARR ECCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHH RFFETQLAGPLQRLLRKQRHAEAEAVLEAALAKTPPTESGSVTLVGAGAGDAGLLTLNAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHH RALNEADIILYDRLVSDTVLQMARRDAEQIEVGKSATGHSVRQEDIHTLMLQHARAGQRV HHCCCCCEEEHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEE VRLKGGDPFVFGRGGEELEFLRTHGIPYEVIPGITAALACAAYAGIPLTHRDHAQSLCLI EEEECCCEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEEE TAHCQSSLDTLNWAALAQERQTLAFYMGVAGLPTIQQRLCEAGRTETTPFALIENGARAQ EHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEECCCHHHH QRVLTGTLKTLAHTAQTYAVRPPALLILGEVTALAEHLHWFGTTPLSAPCPPRTHPIS HHHHHHHHHHHHHHHHHEEECCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure TANVLFPLFANLHDRAVLVVGGGKVAERKTEALLKVGALPIIGAPSLTASLQRWAETGR CCCCHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHCCC ITWRQGTFENSWLQEDIWLVIAATDQPEVNHAAARAAHAQRLFVNVVDDIALSNVQVPAV EEEECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE VERGPLRIAISSGGGAPMVARYLRQQLESLIDDSWGRLTTLFAQRRDTIRARYPNIEARR ECCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHH RFFETQLAGPLQRLLRKQRHAEAEAVLEAALAKTPPTESGSVTLVGAGAGDAGLLTLNAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHH RALNEADIILYDRLVSDTVLQMARRDAEQIEVGKSATGHSVRQEDIHTLMLQHARAGQRV HHCCCCCEEEHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEE VRLKGGDPFVFGRGGEELEFLRTHGIPYEVIPGITAALACAAYAGIPLTHRDHAQSLCLI EEEECCCEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEEE TAHCQSSLDTLNWAALAQERQTLAFYMGVAGLPTIQQRLCEAGRTETTPFALIENGARAQ EHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEECCCHHHH QRVLTGTLKTLAHTAQTYAVRPPALLILGEVTALAEHLHWFGTTPLSAPCPPRTHPIS HHHHHHHHHHHHHHHHHEEECCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA