Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182682444
Identifier: 182682444
GI number: 182682444
Start: 2155957
End: 2156169
Strand: Reverse
Name: 182682444
Synonym: XfasM23_1930
Alternate gene names: NA
Gene position: 2156169-2155957 (Counterclockwise)
Preceding gene: 182682447
Following gene: 182682438
Centisome position: 85.03
GC content: 55.87
Gene sequence:
>213_bases TTGTACGGCGGTGATGGGGCGCCAGTCATTGTGCAGGCGCTGGTGTGGCTGGGTCCGCTAGCTGGGGATGGAGGCATCCA TGAGGTGCTGTTCATAGACAGTGTTGATGGCGCTGTTGCCATTGGGGCAGTGGTGTTGCGTGGTGACACGTTGCGTGAAA TATCAATCTATCCATCTGTGCAATGCATTGGTGATGCGTTGGGTGGCTGTTGA
Upstream 100 bases:
>100_bases GGGGGAAGGGAGGCAATGGTGATGTCATGGGGTGATGTGCAGTGCACACCGACACACAGATGGTAGGGGGCTATGTGGCG GGTATCCCTTTCCTGCTGTC
Downstream 100 bases:
>100_bases TGCTGGTGTGCGTGGCTGTGAGTGTTGCTGGGGTCATCTTCGCGGATTCTTCACACGAGGGGATGTGCTGTCGGGCACAG TACGCACCAAATTATTTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 70
Protein sequence:
>70_residues MYGGDGAPVIVQALVWLGPLAGDGGIHEVLFIDSVDGAVAIGAVVLRGDTLREISIYPSVQCIGDALGGC
Sequences:
>Translated_70_residues MYGGDGAPVIVQALVWLGPLAGDGGIHEVLFIDSVDGAVAIGAVVLRGDTLREISIYPSVQCIGDALGGC >Mature_70_residues MYGGDGAPVIVQALVWLGPLAGDGGIHEVLFIDSVDGAVAIGAVVLRGDTLREISIYPSVQCIGDALGGC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7039; Mature: 7039
Theoretical pI: Translated: 3.81; Mature: 3.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYGGDGAPVIVQALVWLGPLAGDGGIHEVLFIDSVDGAVAIGAVVLRGDTLREISIYPSV CCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHEEEEEEECCCCEEEEECCCCH QCIGDALGGC HHHHHHHCCC >Mature Secondary Structure MYGGDGAPVIVQALVWLGPLAGDGGIHEVLFIDSVDGAVAIGAVVLRGDTLREISIYPSV CCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHEEEEEEECCCCEEEEECCCCH QCIGDALGGC HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA