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The map label for this gene is yxkH [H]

Identifier: 182682419

GI number: 182682419

Start: 2120476

End: 2121195

Strand: Reverse

Name: yxkH [H]

Synonym: XfasM23_1905

Alternate gene names: 182682419

Gene position: 2121195-2120476 (Counterclockwise)

Preceding gene: 182682423

Following gene: 182682418

Centisome position: 83.65

GC content: 57.08

Gene sequence:

>720_bases
ATGGCTATCCCAATTCTGATGTATCACAACATTGCGAAAGTGCCGAAGCAGGTGCGACATCTGCGCGGATTGTATGTGAC
GCCGACGGCATTCGCGCGCCAGATGTGGCTACTTCACCGGCTTGGCTATTGCTGTCTGTCGATGTCCGCCGCGATGCCGT
ATCTCCGTGGTGAGCGTTCAGGAAAGGTCATGGTGGTGACTTTGGATGATGGTTATCTGGATAATCTGCAAGCGGCGCTT
CCGGTGCTTCAGGCGCACGGTTTCAGTGCAACTTGTTACCTTGTCAGCGGTAGCCTCGCTCGCTTCAACACGTGGGATGC
GGAACGGCTCAAAGTGTGCAAACCGCTGATGAGTCCTGCGCAAGTCCGTCAATGGCATGACGCTGGGATGGAGGTGGGGG
CGCATACACGTAGTCACCCGCATCTCAGTGGGTGTACAGCAGCACAATTGCATGAAGAGATCGCCGGTTGCCGCGATGAT
TTGGAGCAGTGTATCGGTGCGCCGGTGACCCAATTCTGTTATCCATACGGTGATGTGACACCGCCGGTGATTGATGCAGT
CTGTGATGCCGGCTATGCTGCGGCGACCACGACGCGGCGTGGCCGCGTCTTCCCCGGCCAACATCTGTGGACATTGCCGC
GCGTGCCGGTATCGTACCGTCACATCCTCCCTCAGTTCGCGTTACGTACATTGACTGGTTATGAGGATCGTCGGGGATGA

Upstream 100 bases:

>100_bases
TATTTGTAGTCATGCATGGTGGGGAGGGCAGAAGACCAAGAAAAACATTGGGTAGAATGCATCCCGGGCAGGCAACTGAA
TATGGACGCTTGGGATTTTG

Downstream 100 bases:

>100_bases
AGGTGTTGTTTGTGGGAACGTCCCGTGGAGGTGGGGGGGCTGAGAGTCATTTTGTCGGCCTAGTGCGCGCGATGGCTGAG
ACCAATCACCAGAGTACGGC

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MAIPILMYHNIAKVPKQVRHLRGLYVTPTAFARQMWLLHRLGYCCLSMSAAMPYLRGERSGKVMVVTLDDGYLDNLQAAL
PVLQAHGFSATCYLVSGSLARFNTWDAERLKVCKPLMSPAQVRQWHDAGMEVGAHTRSHPHLSGCTAAQLHEEIAGCRDD
LEQCIGAPVTQFCYPYGDVTPPVIDAVCDAGYAAATTTRRGRVFPGQHLWTLPRVPVSYRHILPQFALRTLTGYEDRRG

Sequences:

>Translated_239_residues
MAIPILMYHNIAKVPKQVRHLRGLYVTPTAFARQMWLLHRLGYCCLSMSAAMPYLRGERSGKVMVVTLDDGYLDNLQAAL
PVLQAHGFSATCYLVSGSLARFNTWDAERLKVCKPLMSPAQVRQWHDAGMEVGAHTRSHPHLSGCTAAQLHEEIAGCRDD
LEQCIGAPVTQFCYPYGDVTPPVIDAVCDAGYAAATTTRRGRVFPGQHLWTLPRVPVSYRHILPQFALRTLTGYEDRRG
>Mature_238_residues
AIPILMYHNIAKVPKQVRHLRGLYVTPTAFARQMWLLHRLGYCCLSMSAAMPYLRGERSGKVMVVTLDDGYLDNLQAALP
VLQAHGFSATCYLVSGSLARFNTWDAERLKVCKPLMSPAQVRQWHDAGMEVGAHTRSHPHLSGCTAAQLHEEIAGCRDDL
EQCIGAPVTQFCYPYGDVTPPVIDAVCDAGYAAATTTRRGRVFPGQHLWTLPRVPVSYRHILPQFALRTLTGYEDRRG

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Escherichia coli, GI1786322, Length=243, Percent_Identity=26.7489711934156, Blast_Score=76, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 26608; Mature: 26477

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIPILMYHNIAKVPKQVRHLRGLYVTPTAFARQMWLLHRLGYCCLSMSAAMPYLRGERS
CCCCHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCC
GKVMVVTLDDGYLDNLQAALPVLQAHGFSATCYLVSGSLARFNTWDAERLKVCKPLMSPA
CCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHCCCCCHHHHHHHHHHCCHH
QVRQWHDAGMEVGAHTRSHPHLSGCTAAQLHEEIAGCRDDLEQCIGAPVTQFCYPYGDVT
HHHHHHHHCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCC
PPVIDAVCDAGYAAATTTRRGRVFPGQHLWTLPRVPVSYRHILPQFALRTLTGYEDRRG
HHHHHHHHCCCCHHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AIPILMYHNIAKVPKQVRHLRGLYVTPTAFARQMWLLHRLGYCCLSMSAAMPYLRGERS
CCCHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCC
GKVMVVTLDDGYLDNLQAALPVLQAHGFSATCYLVSGSLARFNTWDAERLKVCKPLMSPA
CCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHCCCCCHHHHHHHHHHCCHH
QVRQWHDAGMEVGAHTRSHPHLSGCTAAQLHEEIAGCRDDLEQCIGAPVTQFCYPYGDVT
HHHHHHHHCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCC
PPVIDAVCDAGYAAATTTRRGRVFPGQHLWTLPRVPVSYRHILPQFALRTLTGYEDRRG
HHHHHHHHCCCCHHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]