Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682401
Identifier: 182682401
GI number: 182682401
Start: 2090771
End: 2091871
Strand: Direct
Name: 182682401
Synonym: XfasM23_1887
Alternate gene names: NA
Gene position: 2090771-2091871 (Clockwise)
Preceding gene: 182682400
Following gene: 182682402
Centisome position: 82.45
GC content: 60.85
Gene sequence:
>1101_bases ATGCAGCCCGGCCAACTCTTCTTCGAACACTTCGGCCACGATGCAATCATCGTCGCCGACCCAATCAGCGGCCAATCCCT CTCCTACAACTTCGGCTACTTCGACCCCCTGGAACCTGACTTCCTCCGTCGTGTCATCCGCGGCGAAATGCTTTATTACC TCATCTCACTTCCCTTAGAAGAAGACCTCGACGAATACCTCAACACCGGGCGCAGCATCACCATCCAATGGCTGGACCTG CCCCCTGAACAAGCCACCACACTCGCACAGACACTGGAAATTCGCAGCCAGCCAGAGTATGCCCGCTATCACTACGACCT CATCACTGCCAACTGCGCCACAATGCTGCGCGACAGCCTGGACCAGGCGATGGGCGGCACACTGAAAACACAACTGACAC AACACACACACCGCAACACCTACCGCAGCGAAGTCATCCGCCTGGCCTCGCCAACCCCCTGGATGTGGCTCGGACTTGAC CTGGTGATGGGTCCATACGCCGACCAGCCACTCTCACCCTGGGAAGAATCCTTCATACCCATGCGCCTGGCCCAACACCT GACCCAAGTGCACAACAGCGCCGGACGCCCCCTAGTACAACAAACCCAGATCATCCTACCCCACCACCCCACCAGCCCCT CCCCACACCCCCTCCCCCGCCCCTGGACGTGGTGGCTCCTTGGCCTTGGCATAGCAACACTGACACTCCTACTCGCACCA CACCACCCACGCCGCCTGACCCTACTGGCACTCCCATTCTGGTTGATCTGCACCCTCGGCGGACTCCTCCTCATCTACCT GTGGGGCTTCACCATCCACCAGGCCGCCTGGGCCAACCACAACCTCCTCCTCCTCAACCCACTGAGCCTGCTCCTGATCG TCGGCGGTATCGCCTGGTTATGCGGCAGAACACCCGGCCGCTGTTTCGATCTCCTCCTATGGAGCAACGCCGCCGCCAGC CTCGCCGCACTGCTCACCTACTGGCTCCCCGCCTACACCCAACACAACCTCCCATGGATCGGCCTGCTCCTTCCAAACCA CCTCACCCTGGCCTGGACACTGCACCGCCGCCTCACCACAGCAACACATCACCCAAAATGA
Upstream 100 bases:
>100_bases AACCCACCGCCTCCTGCGTGTCCTATCCCTACTCCTCTGTACCTGGCTGCTACTGACACCCAGCGCCGCTGCCCATCCCC CACGCATTGGCATCGCCACA
Downstream 100 bases:
>100_bases CCACACCCCAGCCCCCACAACACCCCTCTCCTGAAAACCCAGCCTGTGTCATCACCTGCGCCTACTACGACCCACAAAAC CAGCGCCATGACATCCACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MQPGQLFFEHFGHDAIIVADPISGQSLSYNFGYFDPLEPDFLRRVIRGEMLYYLISLPLEEDLDEYLNTGRSITIQWLDL PPEQATTLAQTLEIRSQPEYARYHYDLITANCATMLRDSLDQAMGGTLKTQLTQHTHRNTYRSEVIRLASPTPWMWLGLD LVMGPYADQPLSPWEESFIPMRLAQHLTQVHNSAGRPLVQQTQIILPHHPTSPSPHPLPRPWTWWLLGLGIATLTLLLAP HHPRRLTLLALPFWLICTLGGLLLIYLWGFTIHQAAWANHNLLLLNPLSLLLIVGGIAWLCGRTPGRCFDLLLWSNAAAS LAALLTYWLPAYTQHNLPWIGLLLPNHLTLAWTLHRRLTTATHHPK
Sequences:
>Translated_366_residues MQPGQLFFEHFGHDAIIVADPISGQSLSYNFGYFDPLEPDFLRRVIRGEMLYYLISLPLEEDLDEYLNTGRSITIQWLDL PPEQATTLAQTLEIRSQPEYARYHYDLITANCATMLRDSLDQAMGGTLKTQLTQHTHRNTYRSEVIRLASPTPWMWLGLD LVMGPYADQPLSPWEESFIPMRLAQHLTQVHNSAGRPLVQQTQIILPHHPTSPSPHPLPRPWTWWLLGLGIATLTLLLAP HHPRRLTLLALPFWLICTLGGLLLIYLWGFTIHQAAWANHNLLLLNPLSLLLIVGGIAWLCGRTPGRCFDLLLWSNAAAS LAALLTYWLPAYTQHNLPWIGLLLPNHLTLAWTLHRRLTTATHHPK >Mature_366_residues MQPGQLFFEHFGHDAIIVADPISGQSLSYNFGYFDPLEPDFLRRVIRGEMLYYLISLPLEEDLDEYLNTGRSITIQWLDL PPEQATTLAQTLEIRSQPEYARYHYDLITANCATMLRDSLDQAMGGTLKTQLTQHTHRNTYRSEVIRLASPTPWMWLGLD LVMGPYADQPLSPWEESFIPMRLAQHLTQVHNSAGRPLVQQTQIILPHHPTSPSPHPLPRPWTWWLLGLGIATLTLLLAP HHPRRLTLLALPFWLICTLGGLLLIYLWGFTIHQAAWANHNLLLLNPLSLLLIVGGIAWLCGRTPGRCFDLLLWSNAAAS LAALLTYWLPAYTQHNLPWIGLLLPNHLTLAWTLHRRLTTATHHPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41692; Mature: 41692
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPGQLFFEHFGHDAIIVADPISGQSLSYNFGYFDPLEPDFLRRVIRGEMLYYLISLPLE CCCHHHHHHHCCCCEEEEECCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCH EDLDEYLNTGRSITIQWLDLPPEQATTLAQTLEIRSQPEYARYHYDLITANCATMLRDSL HHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH DQAMGGTLKTQLTQHTHRNTYRSEVIRLASPTPWMWLGLDLVMGPYADQPLSPWEESFIP HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHCCCCCCCCCCCHHHHHHH MRLAQHLTQVHNSAGRPLVQQTQIILPHHPTSPSPHPLPRPWTWWLLGLGIATLTLLLAP HHHHHHHHHHHHHCCCCCHHHCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC HHPRRLTLLALPFWLICTLGGLLLIYLWGFTIHQAAWANHNLLLLNPLSLLLIVGGIAWL CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHH CGRTPGRCFDLLLWSNAAASLAALLTYWLPAYTQHNLPWIGLLLPNHLTLAWTLHRRLTT HCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEHHHHHHC ATHHPK CCCCCC >Mature Secondary Structure MQPGQLFFEHFGHDAIIVADPISGQSLSYNFGYFDPLEPDFLRRVIRGEMLYYLISLPLE CCCHHHHHHHCCCCEEEEECCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCH EDLDEYLNTGRSITIQWLDLPPEQATTLAQTLEIRSQPEYARYHYDLITANCATMLRDSL HHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH DQAMGGTLKTQLTQHTHRNTYRSEVIRLASPTPWMWLGLDLVMGPYADQPLSPWEESFIP HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHCCCCCCCCCCCHHHHHHH MRLAQHLTQVHNSAGRPLVQQTQIILPHHPTSPSPHPLPRPWTWWLLGLGIATLTLLLAP HHHHHHHHHHHHHCCCCCHHHCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC HHPRRLTLLALPFWLICTLGGLLLIYLWGFTIHQAAWANHNLLLLNPLSLLLIVGGIAWL CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHH CGRTPGRCFDLLLWSNAAASLAALLTYWLPAYTQHNLPWIGLLLPNHLTLAWTLHRRLTT HCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEHHHHHHC ATHHPK CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA