Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182682399
Identifier: 182682399
GI number: 182682399
Start: 2089147
End: 2089671
Strand: Direct
Name: 182682399
Synonym: XfasM23_1885
Alternate gene names: NA
Gene position: 2089147-2089671 (Clockwise)
Preceding gene: 182682398
Following gene: 182682400
Centisome position: 82.39
GC content: 56.57
Gene sequence:
>525_bases ATGCGTGCCTCCCTAACCGCCCTACTTACGACACTGCCGACACTCATCTGCTTGGCTACCGAACACCCCCATCTCACACC TCCCGACTTGGAAGCACTGATCGAATGCCGCCAACGTGCCATCGACTACGCCCAACTCGTCCCCCTCCTTGAAGACCCAC CCAAAGCCACCACACTAGGTTGGCACCCCCTACCGGCAACCAACCCCTTCATGACCGAATACACACTCCATACCCCCATT CACGTATTCGGCTACCAGACCAAACATATCGCCCTATCGGGTGGCAGCATCATCGCCATCCTTGACCTAACCGACCCACG CCCACTGGCACGCACCCTACGACTAGACACCGCAATCGATACCCCCAAAAAAACCATATTCGGACGCGAACTCACCAGCA CTAACACCACCAACCCCAAGACCGGCCAACCCGCCATCGAATCGATCGTACTCAACGTTTCAAACGTTACCTCACACCCT GGGAAAACCTTAGTGGGCTGTACCTACAGCCTCGACGACCCCTAA
Upstream 100 bases:
>100_bases GGAACCACGAAGACCATCAAGAAGCCGATGCCATGGAACAACTTGAACGCGAGATCCTAGCCAATCTCGGCATCAGCGAC CCCTACCTCGGAGAATACTG
Downstream 100 bases:
>100_bases CACCTGCCATGACTTTTCAGAAGCACGTAGCCCATACCCAGCCTGCTAAACTTGCAACAACGCCCAGTCCACCGGGTACT GCAACCACACCTTCATTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MRASLTALLTTLPTLICLATEHPHLTPPDLEALIECRQRAIDYAQLVPLLEDPPKATTLGWHPLPATNPFMTEYTLHTPI HVFGYQTKHIALSGGSIIAILDLTDPRPLARTLRLDTAIDTPKKTIFGRELTSTNTTNPKTGQPAIESIVLNVSNVTSHP GKTLVGCTYSLDDP
Sequences:
>Translated_174_residues MRASLTALLTTLPTLICLATEHPHLTPPDLEALIECRQRAIDYAQLVPLLEDPPKATTLGWHPLPATNPFMTEYTLHTPI HVFGYQTKHIALSGGSIIAILDLTDPRPLARTLRLDTAIDTPKKTIFGRELTSTNTTNPKTGQPAIESIVLNVSNVTSHP GKTLVGCTYSLDDP >Mature_174_residues MRASLTALLTTLPTLICLATEHPHLTPPDLEALIECRQRAIDYAQLVPLLEDPPKATTLGWHPLPATNPFMTEYTLHTPI HVFGYQTKHIALSGGSIIAILDLTDPRPLARTLRLDTAIDTPKKTIFGRELTSTNTTNPKTGQPAIESIVLNVSNVTSHP GKTLVGCTYSLDDP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18951; Mature: 18951
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRASLTALLTTLPTLICLATEHPHLTPPDLEALIECRQRAIDYAQLVPLLEDPPKATTLG CCCHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCC WHPLPATNPFMTEYTLHTPIHVFGYQTKHIALSGGSIIAILDLTDPRPLARTLRLDTAID CCCCCCCCCCEEEEEECCCEEEEEECEEEEEEECCCEEEEEECCCCCHHHHHHHHCCCCC TPKKTIFGRELTSTNTTNPKTGQPAIESIVLNVSNVTSHPGKTLVGCTYSLDDP CCCHHHCCCCCCCCCCCCCCCCCHHHHHHEEEHHHCCCCCCCEEEEEEEECCCC >Mature Secondary Structure MRASLTALLTTLPTLICLATEHPHLTPPDLEALIECRQRAIDYAQLVPLLEDPPKATTLG CCCHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCC WHPLPATNPFMTEYTLHTPIHVFGYQTKHIALSGGSIIAILDLTDPRPLARTLRLDTAID CCCCCCCCCCEEEEEECCCEEEEEECEEEEEEECCCEEEEEECCCCCHHHHHHHHCCCCC TPKKTIFGRELTSTNTTNPKTGQPAIESIVLNVSNVTSHPGKTLVGCTYSLDDP CCCHHHCCCCCCCCCCCCCCCCCHHHHHHEEEHHHCCCCCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA