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The map label for this gene is ygaF [H]

Identifier: 182682354

GI number: 182682354

Start: 2041836

End: 2042315

Strand: Direct

Name: ygaF [H]

Synonym: XfasM23_1838

Alternate gene names: 182682354

Gene position: 2041836-2042315 (Clockwise)

Preceding gene: 182682353

Following gene: 182682355

Centisome position: 80.52

GC content: 49.38

Gene sequence:

>480_bases
ATGAACATCGGCGACACCCTGAATCATTCGCTTCTCAACCACCCATTGATGCTATCGGGCGGCACCTGTAAAACACTGAG
CGACTATACCAACCAATGGCTAGTGCTCTACTTCTACCCTAAAGACAACACGCCAGGCTGCACCACAGAAGGTCTGGAGT
TCAACGTGCTACTGCCGCAATTCAAACAGATCAACGCAACTGTCCTTGGTGTCTCTCGTGATTCCGTCAAATCGCACGAC
AGCTTCTGCGCCAAACAGGGTTTCACATTCCCATTGGTCAGCGACAGTGACGCACTACTGTGCAAAGCATTTGACGTGAT
CAAAGAAAAAACAATGTACGGACGCCAAATCATTGGAATAGAACGCAGCACATTCCTGATTGGACCAACACACCGCATCG
TTGAAGCATGGCGCCAAGTCAAAGTACCAGGACACGCTGAAGAAGTACTGACCAAACTCAAAGCCCATGCCGAGCAATAA

Upstream 100 bases:

>100_bases
GAGTTCTGTGATCACCTCAATCTTGATGCCATTTTAGATCCGATGAAATTCTGAACGCTCAGGTCCCCCTTCCGCATTAT
CTCCAGACAGCACCTCACCT

Downstream 100 bases:

>100_bases
CCAGCCCTCCCTCCCGTAACACAGTTCATGGCAAGCGGCCCCTACGCCACACCAGGAATTTCAGATGACACCAGGCAAGC
GTACCTACGTACTGGACACC

Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen

Products: NA

Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MNIGDTLNHSLLNHPLMLSGGTCKTLSDYTNQWLVLYFYPKDNTPGCTTEGLEFNVLLPQFKQINATVLGVSRDSVKSHD
SFCAKQGFTFPLVSDSDALLCKAFDVIKEKTMYGRQIIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVLTKLKAHAEQ

Sequences:

>Translated_159_residues
MNIGDTLNHSLLNHPLMLSGGTCKTLSDYTNQWLVLYFYPKDNTPGCTTEGLEFNVLLPQFKQINATVLGVSRDSVKSHD
SFCAKQGFTFPLVSDSDALLCKAFDVIKEKTMYGRQIIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVLTKLKAHAEQ
>Mature_159_residues
MNIGDTLNHSLLNHPLMLSGGTCKTLSDYTNQWLVLYFYPKDNTPGCTTEGLEFNVLLPQFKQINATVLGVSRDSVKSHD
SFCAKQGFTFPLVSDSDALLCKAFDVIKEKTMYGRQIIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVLTKLKAHAEQ

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1788825, Length=137, Percent_Identity=35.036496350365, Blast_Score=90, Evalue=9e-20,
Organism=Drosophila melanogaster, GI17738015, Length=139, Percent_Identity=35.9712230215827, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 17784; Mature: 17784

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIGDTLNHSLLNHPLMLSGGTCKTLSDYTNQWLVLYFYPKDNTPGCTTEGLEFNVLLPQ
CCCCCHHHHHHHCCCEEEECCCCCHHHHCCCCEEEEEEEECCCCCCCCCCCEEEEEECCC
FKQINATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDALLCKAFDVIKEKTMYGRQIIGI
CCCCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEE
ERSTFLIGPTHRIVEAWRQVKVPGHAEEVLTKLKAHAEQ
CCCEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MNIGDTLNHSLLNHPLMLSGGTCKTLSDYTNQWLVLYFYPKDNTPGCTTEGLEFNVLLPQ
CCCCCHHHHHHHCCCEEEECCCCCHHHHCCCCEEEEEEEECCCCCCCCCCCEEEEEECCC
FKQINATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDALLCKAFDVIKEKTMYGRQIIGI
CCCCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEE
ERSTFLIGPTHRIVEAWRQVKVPGHAEEVLTKLKAHAEQ
CCCEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]