Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is ylaK [H]
Identifier: 182682355
GI number: 182682355
Start: 2043494
End: 2043781
Strand: Direct
Name: ylaK [H]
Synonym: XfasM23_1840
Alternate gene names: 182682355
Gene position: 2043494-2043781 (Clockwise)
Preceding gene: 182682354
Following gene: 182682366
Centisome position: 80.59
GC content: 55.21
Gene sequence:
>288_bases ATGAACTTCATGAGCGGGCGTACCTTTTTATCGCGCCACCTCATTCTGAACGAAGCACAGAACCTCACCCCCAAGCAAAT GAAGACCCTCATCACCCGAGGAGGCCCAGGCACCAAAATCGTCTGCCTCGGTAACGCCGAACAAATCGATACCCCTTACC TGACAGAAACCACCTCTGGTCTCACCTATGCCATTGACCGCTTCAAACAATGGCCCCACAGCGCACACGTGACTTTGCGC CGTGGCGAACGTTCACGCCTGGCCGACTACGCATCGGAAGCCTTGTAA
Upstream 100 bases:
>100_bases TACCGACAACCTTGAAGTACTCACACATCTCCATGAAGGGAGTGCCTAGGGCCGTGCAGCAACCAACGACCTACTCACCA GTCGCATCAAGATCCGCTCC
Downstream 100 bases:
>100_bases AAGGCAACTGAGATACGCTGTAACACCCCGCCACCACACCCCGACTCCCCCGGCCGACAACCCAACACACATTGACAATC CCCCCAGCGACTCCCTAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MNFMSGRTFLSRHLILNEAQNLTPKQMKTLITRGGPGTKIVCLGNAEQIDTPYLTETTSGLTYAIDRFKQWPHSAHVTLR RGERSRLADYASEAL
Sequences:
>Translated_95_residues MNFMSGRTFLSRHLILNEAQNLTPKQMKTLITRGGPGTKIVCLGNAEQIDTPYLTETTSGLTYAIDRFKQWPHSAHVTLR RGERSRLADYASEAL >Mature_95_residues MNFMSGRTFLSRHLILNEAQNLTPKQMKTLITRGGPGTKIVCLGNAEQIDTPYLTETTSGLTYAIDRFKQWPHSAHVTLR RGERSRLADYASEAL
Specific function: Unknown
COG id: COG1875
COG function: function code T; Predicted ATPase related to phosphate starvation-inducible protein PhoH
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PINc domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 - InterPro: IPR006596 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 10694; Mature: 10694
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFMSGRTFLSRHLILNEAQNLTPKQMKTLITRGGPGTKIVCLGNAEQIDTPYLTETTSG CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCC LTYAIDRFKQWPHSAHVTLRRGERSRLADYASEAL HHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCC >Mature Secondary Structure MNFMSGRTFLSRHLILNEAQNLTPKQMKTLITRGGPGTKIVCLGNAEQIDTPYLTETTSG CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCC LTYAIDRFKQWPHSAHVTLRRGERSRLADYASEAL HHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]