Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682341
Identifier: 182682341
GI number: 182682341
Start: 2028329
End: 2028895
Strand: Direct
Name: 182682341
Synonym: XfasM23_1824
Alternate gene names: NA
Gene position: 2028329-2028895 (Clockwise)
Preceding gene: 182682340
Following gene: 182682342
Centisome position: 79.99
GC content: 59.79
Gene sequence:
>567_bases ATGAAACTCACCCTAAAAAACGTGCGCTTAGCCTTCCCCGTGTTGTTTGAACCCAAGAAAGTCAATGGCGAAGGCGAGGC CGCCTTCTCGGCCTGCTTCCTCATCGACCCTGCTGACCCGCAAGTCAAAGCCCTTAACCAGGCCATTGACAAGATGGCCA ATGACAAATGGGGCGCTAAGGCGGCGGCCCAGCTTAAACAGATGCGTATGGGCGACAGAGTCGCCTTGCATGATGGCGAC CTGAAAGCCAGCTATGACGGGTTTGCAGGGCACCTATACGTCTCTGCGCGTAACAAGGCACGGCCACTGGTGATCGACCG TGACAGGACCCCGCTCGCCGCGCAGGACGGCAGGCCGTATGCCGGATGCTACGTCAACGCCAACATAGAACTCTGGGCGC AGGACAACAACTACGGCAAGCGGATTAACGCCTCGCTGGGGGGCGTGCAGTTCTTGCGTGATGGTGAGGCGTTCGCTGGA GGCGGTGTGGCCAGCGTGGAGGACTTCGAGGACCTGAGCAACGTCGCCGAGCTGGAGGATGTTGAAGGAGCCATGCCGTG GGGGTGA
Upstream 100 bases:
>100_bases TCGCCCTTCAGGACGCGACGGATTTCCAGGACTTGAGCGATATGCCCATCCCCCCACTCCCAGACACAGCACCCTCACTT CAATCTCAGGAGACACCGTA
Downstream 100 bases:
>100_bases ATCGGATTCACACCACTGGCAGCACACGAAACGGCAGGGCCGAGAAACGCGCACCCTCCACCGGCTTGCATCGTAAGGAC AACATCATGAATGCACCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: Phage-Like Protein; Conserved Phage-Associated Protein; APSE-2 Prophage
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MKLTLKNVRLAFPVLFEPKKVNGEGEAAFSACFLIDPADPQVKALNQAIDKMANDKWGAKAAAQLKQMRMGDRVALHDGD LKASYDGFAGHLYVSARNKARPLVIDRDRTPLAAQDGRPYAGCYVNANIELWAQDNNYGKRINASLGGVQFLRDGEAFAG GGVASVEDFEDLSNVAELEDVEGAMPWG
Sequences:
>Translated_188_residues MKLTLKNVRLAFPVLFEPKKVNGEGEAAFSACFLIDPADPQVKALNQAIDKMANDKWGAKAAAQLKQMRMGDRVALHDGD LKASYDGFAGHLYVSARNKARPLVIDRDRTPLAAQDGRPYAGCYVNANIELWAQDNNYGKRINASLGGVQFLRDGEAFAG GGVASVEDFEDLSNVAELEDVEGAMPWG >Mature_188_residues MKLTLKNVRLAFPVLFEPKKVNGEGEAAFSACFLIDPADPQVKALNQAIDKMANDKWGAKAAAQLKQMRMGDRVALHDGD LKASYDGFAGHLYVSARNKARPLVIDRDRTPLAAQDGRPYAGCYVNANIELWAQDNNYGKRINASLGGVQFLRDGEAFAG GGVASVEDFEDLSNVAELEDVEGAMPWG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20388; Mature: 20388
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTLKNVRLAFPVLFEPKKVNGEGEAAFSACFLIDPADPQVKALNQAIDKMANDKWGAK CEEEECCEEEEEEEEECCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHH AAAQLKQMRMGDRVALHDGDLKASYDGFAGHLYVSARNKARPLVIDRDRTPLAAQDGRPY HHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCE AGCYVNANIELWAQDNNYGKRINASLGGVQFLRDGEAFAGGGVASVEDFEDLSNVAELED EEEEEECCEEEEECCCCCCCEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH VEGAMPWG CCCCCCCC >Mature Secondary Structure MKLTLKNVRLAFPVLFEPKKVNGEGEAAFSACFLIDPADPQVKALNQAIDKMANDKWGAK CEEEECCEEEEEEEEECCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHH AAAQLKQMRMGDRVALHDGDLKASYDGFAGHLYVSARNKARPLVIDRDRTPLAAQDGRPY HHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCE AGCYVNANIELWAQDNNYGKRINASLGGVQFLRDGEAFAGGGVASVEDFEDLSNVAELED EEEEEECCEEEEECCCCCCCEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH VEGAMPWG CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA