Definition Xylella fastidiosa M23 chromosome, complete genome.
Accession NC_010577
Length 2,535,690

Click here to switch to the map view.

The map label for this gene is 182682340

Identifier: 182682340

GI number: 182682340

Start: 2027052

End: 2028329

Strand: Direct

Name: 182682340

Synonym: XfasM23_1823

Alternate gene names: NA

Gene position: 2027052-2028329 (Clockwise)

Preceding gene: 182682339

Following gene: 182682341

Centisome position: 79.94

GC content: 59.0

Gene sequence:

>1278_bases
ATGAGCCAGCACGCCATGTTATCCCCGAGCAGTGCGCATCGTTGGTTGCACTGTCCGGCAAGTGTTGCGTTAACGCGCAC
CTGCAAAGACGACGCTAGCCCATTTGCCGATGAAGGCACCGTGGCCCATACGGTGGCTGCCGACGCATTACGCACCGGCT
CCGATGCCAGCGCGTACGTGGGGGCATGCCATGAGGTCAACGGCCACCGCTGGGAAGTCACCGCAGAGATGGCGGCGTAC
GTGCAGGAGTATGTGGACTATGTACGCGCCATTGCGGGGGTGCGCCTGGTCGAGCAGCCCCTACGCATTGCCTCCATCAC
TGGGGAGCAAGACGCTAAAGGCACCGCTGATGTGGTGATTTTAGCGGGGGATGAGCTAACCATCGTTGATCTCAAATACG
GCAGAGGCGTCAAAGTCTTCGCCGAAGGCAATGAGCAATTGCAGCTGTATGCGCTGGCAGCGCTGAGTGAATTTGGAGGG
GTGGAAGCCTTTCAGCACGTGCGGCTAGTGATCGTGCAACCACGGCTTGGGCATGCCGATGAGTGGGTGCGCACCCTCCC
CCAGATGGAGGATTTTAGGCGGAAAGTTGCGCAAGGCGCAGCGCGGTGTAGGGCTGCGATGTGGCACTACAACAACGTAG
GCGAATTGCCTTCAGAGTATTTCGGCCCCGCAGAAACGCCCTGCCGGTTTTGCAAGGCCAAAGCGAGCTGCCCTGCGTTG
GCCACGCATGTACTGAACACGGTGGCAGATGATTTTGTCGACCTCACAAAGCCCATTGTCCCGCAGCTCAGCTACGCGCA
GCTGCGCACGTTTGACAACACCACACTGGCCTGCCTGTTTGGCGCAACAGAGTTAATCGAATCCTGGTGCAAATCTATTC
GCGACAGGGCAGCAGCGGAGTTGCTTTCAGGTCAGCCCGTGCCTGGATACAAGGTGGTTCAAGGCCGACAGGGGCCGCGC
CGTTGGGCGGACATGACCGCCGCTGAAGCCATGCTCAAACAGCTGCGCATCAAATTCAAAGACATGTACGACGTGTCTCT
CATCAGCCCCACGCGTGCCGAGAAACTCCACCAGGTCGGAGTCATTGGTGATCGCCAGTGGCCAAAGCTCCAACCGCTCA
TTCATAGGTCAACAGGGGCGCCCATTGTTGTTCCCACATCGGATAAACGCCCCGCGCTCGCCCTTCAGGACGCGACGGAT
TTCCAGGACTTGAGCGATATGCCCATCCCCCCACTCCCAGACACAGCACCCTCACTTCAATCTCAGGAGACACCGTAA

Upstream 100 bases:

>100_bases
GCCTCTCTCAAATCCCTCCGGAGTTGTACCCAACGCTGATGGAGCGCATCGAAGGATTTTACATCGCCCACGAACGCGGT
TTGCCCTTAGAGGCTGAGAC

Downstream 100 bases:

>100_bases
TGAAACTCACCCTAAAAAACGTGCGCTTAGCCTTCCCCGTGTTGTTTGAACCCAAGAAAGTCAATGGCGAAGGCGAGGCC
GCCTTCTCGGCCTGCTTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 425; Mature: 424

Protein sequence:

>425_residues
MSQHAMLSPSSAHRWLHCPASVALTRTCKDDASPFADEGTVAHTVAADALRTGSDASAYVGACHEVNGHRWEVTAEMAAY
VQEYVDYVRAIAGVRLVEQPLRIASITGEQDAKGTADVVILAGDELTIVDLKYGRGVKVFAEGNEQLQLYALAALSEFGG
VEAFQHVRLVIVQPRLGHADEWVRTLPQMEDFRRKVAQGAARCRAAMWHYNNVGELPSEYFGPAETPCRFCKAKASCPAL
ATHVLNTVADDFVDLTKPIVPQLSYAQLRTFDNTTLACLFGATELIESWCKSIRDRAAAELLSGQPVPGYKVVQGRQGPR
RWADMTAAEAMLKQLRIKFKDMYDVSLISPTRAEKLHQVGVIGDRQWPKLQPLIHRSTGAPIVVPTSDKRPALALQDATD
FQDLSDMPIPPLPDTAPSLQSQETP

Sequences:

>Translated_425_residues
MSQHAMLSPSSAHRWLHCPASVALTRTCKDDASPFADEGTVAHTVAADALRTGSDASAYVGACHEVNGHRWEVTAEMAAY
VQEYVDYVRAIAGVRLVEQPLRIASITGEQDAKGTADVVILAGDELTIVDLKYGRGVKVFAEGNEQLQLYALAALSEFGG
VEAFQHVRLVIVQPRLGHADEWVRTLPQMEDFRRKVAQGAARCRAAMWHYNNVGELPSEYFGPAETPCRFCKAKASCPAL
ATHVLNTVADDFVDLTKPIVPQLSYAQLRTFDNTTLACLFGATELIESWCKSIRDRAAAELLSGQPVPGYKVVQGRQGPR
RWADMTAAEAMLKQLRIKFKDMYDVSLISPTRAEKLHQVGVIGDRQWPKLQPLIHRSTGAPIVVPTSDKRPALALQDATD
FQDLSDMPIPPLPDTAPSLQSQETP
>Mature_424_residues
SQHAMLSPSSAHRWLHCPASVALTRTCKDDASPFADEGTVAHTVAADALRTGSDASAYVGACHEVNGHRWEVTAEMAAYV
QEYVDYVRAIAGVRLVEQPLRIASITGEQDAKGTADVVILAGDELTIVDLKYGRGVKVFAEGNEQLQLYALAALSEFGGV
EAFQHVRLVIVQPRLGHADEWVRTLPQMEDFRRKVAQGAARCRAAMWHYNNVGELPSEYFGPAETPCRFCKAKASCPALA
THVLNTVADDFVDLTKPIVPQLSYAQLRTFDNTTLACLFGATELIESWCKSIRDRAAAELLSGQPVPGYKVVQGRQGPRR
WADMTAAEAMLKQLRIKFKDMYDVSLISPTRAEKLHQVGVIGDRQWPKLQPLIHRSTGAPIVVPTSDKRPALALQDATDF
QDLSDMPIPPLPDTAPSLQSQETP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46569; Mature: 46438

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQHAMLSPSSAHRWLHCPASVALTRTCKDDASPFADEGTVAHTVAADALRTGSDASAYV
CCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHH
GACHEVNGHRWEVTAEMAAYVQEYVDYVRAIAGVRLVEQPLRIASITGEQDAKGTADVVI
HHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEECCCCCCCCCCCCEEE
LAGDELTIVDLKYGRGVKVFAEGNEQLQLYALAALSEFGGVEAFQHVRLVIVQPRLGHAD
EECCCEEEEEEECCCCEEEEECCCCEEEEHHHHHHHHHCCHHHHCCEEEEEECCCCCCHH
EWVRTLPQMEDFRRKVAQGAARCRAAMWHYNNVGELPSEYFGPAETPCRFCKAKASCPAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHCCCCHHH
ATHVLNTVADDFVDLTKPIVPQLSYAQLRTFDNTTLACLFGATELIESWCKSIRDRAAAE
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
LLSGQPVPGYKVVQGRQGPRRWADMTAAEAMLKQLRIKFKDMYDVSLISPTRAEKLHQVG
HHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCHHHHHHHHHC
VIGDRQWPKLQPLIHRSTGAPIVVPTSDKRPALALQDATDFQDLSDMPIPPLPDTAPSLQ
CCCCCCCCCCCHHHCCCCCCCEEEECCCCCCCEEECCCCCHHHCCCCCCCCCCCCCCCCC
SQETP
CCCCC
>Mature Secondary Structure 
SQHAMLSPSSAHRWLHCPASVALTRTCKDDASPFADEGTVAHTVAADALRTGSDASAYV
CCCCCCCCCCCCCEEECCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHH
GACHEVNGHRWEVTAEMAAYVQEYVDYVRAIAGVRLVEQPLRIASITGEQDAKGTADVVI
HHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEECCCCCCCCCCCCEEE
LAGDELTIVDLKYGRGVKVFAEGNEQLQLYALAALSEFGGVEAFQHVRLVIVQPRLGHAD
EECCCEEEEEEECCCCEEEEECCCCEEEEHHHHHHHHHCCHHHHCCEEEEEECCCCCCHH
EWVRTLPQMEDFRRKVAQGAARCRAAMWHYNNVGELPSEYFGPAETPCRFCKAKASCPAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHCCCCHHH
ATHVLNTVADDFVDLTKPIVPQLSYAQLRTFDNTTLACLFGATELIESWCKSIRDRAAAE
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
LLSGQPVPGYKVVQGRQGPRRWADMTAAEAMLKQLRIKFKDMYDVSLISPTRAEKLHQVG
HHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCHHHHHHHHHC
VIGDRQWPKLQPLIHRSTGAPIVVPTSDKRPALALQDATDFQDLSDMPIPPLPDTAPSLQ
CCCCCCCCCCCHHHCCCCCCCEEEECCCCCCCEEECCCCCHHHCCCCCCCCCCCCCCCCC
SQETP
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA