Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682339
Identifier: 182682339
GI number: 182682339
Start: 2026558
End: 2027055
Strand: Direct
Name: 182682339
Synonym: XfasM23_1822
Alternate gene names: NA
Gene position: 2026558-2027055 (Clockwise)
Preceding gene: 182682338
Following gene: 182682340
Centisome position: 79.92
GC content: 58.43
Gene sequence:
>498_bases ATGCGCTGTGGTGACAACGGACAACACATCGACACGGAACACCCCACACACGAGAGAAAAAAGCCCATGTTTCCTATCAC CGTCACGATTACCGATCAGGCCCAATTAAACGCTGTGTTAGCGGTGCTTAACCCGCCCCGCAGCACGAGCAGCCCCGCGC AACCTGTGCTTGACACTACACCGCGCAGCGATAGCGCCCCCAGCCCTCCACCGGCGGCACCTCCTCCCCCAACGGATGTG GCGCAACCGGCGGCCAATCCTGCTGCTGCTCAGAGCACAACGGACGCTATGAGCACGCCTGGGTATCTTGAGGCGGCGAA GGCGTTAACGGCCCTGTCTAAAGAGCTTGGCAATACATACGCCAAAGACGTGTTGAAGTCATTTGGCGTGGCTGGCCTCT CTCAAATCCCTCCGGAGTTGTACCCAACGCTGATGGAGCGCATCGAAGGATTTTACATCGCCCACGAACGCGGTTTGCCC TTAGAGGCTGAGACATGA
Upstream 100 bases:
>100_bases GTGGAGCGTTTTACGCCTGTGGAAAGGGAGTTGTTATCGCGTCTTAAAGGCTTGCTAGAAGACTACGAAGAGGTGCGTGA CGCACTGGAGCAAGACGGCG
Downstream 100 bases:
>100_bases GCCAGCACGCCATGTTATCCCCGAGCAGTGCGCATCGTTGGTTGCACTGTCCGGCAAGTGTTGCGTTAACGCGCACCTGC AAAGACGACGCTAGCCCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MRCGDNGQHIDTEHPTHERKKPMFPITVTITDQAQLNAVLAVLNPPRSTSSPAQPVLDTTPRSDSAPSPPPAAPPPPTDV AQPAANPAAAQSTTDAMSTPGYLEAAKALTALSKELGNTYAKDVLKSFGVAGLSQIPPELYPTLMERIEGFYIAHERGLP LEAET
Sequences:
>Translated_165_residues MRCGDNGQHIDTEHPTHERKKPMFPITVTITDQAQLNAVLAVLNPPRSTSSPAQPVLDTTPRSDSAPSPPPAAPPPPTDV AQPAANPAAAQSTTDAMSTPGYLEAAKALTALSKELGNTYAKDVLKSFGVAGLSQIPPELYPTLMERIEGFYIAHERGLP LEAET >Mature_165_residues MRCGDNGQHIDTEHPTHERKKPMFPITVTITDQAQLNAVLAVLNPPRSTSSPAQPVLDTTPRSDSAPSPPPAAPPPPTDV AQPAANPAAAQSTTDAMSTPGYLEAAKALTALSKELGNTYAKDVLKSFGVAGLSQIPPELYPTLMERIEGFYIAHERGLP LEAET
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17461; Mature: 17461
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCGDNGQHIDTEHPTHERKKPMFPITVTITDQAQLNAVLAVLNPPRSTSSPAQPVLDTT CCCCCCCCCCCCCCCCCHHCCCCCEEEEEEECCHHHHEEEEEECCCCCCCCCCCCCCCCC PRSDSAPSPPPAAPPPPTDVAQPAANPAAAQSTTDAMSTPGYLEAAKALTALSKELGNTY CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHH AKDVLKSFGVAGLSQIPPELYPTLMERIEGFYIAHERGLPLEAET HHHHHHHHCCCCHHHCCHHHHHHHHHHHCCEEEECCCCCCCCCCC >Mature Secondary Structure MRCGDNGQHIDTEHPTHERKKPMFPITVTITDQAQLNAVLAVLNPPRSTSSPAQPVLDTT CCCCCCCCCCCCCCCCCHHCCCCCEEEEEEECCHHHHEEEEEECCCCCCCCCCCCCCCCC PRSDSAPSPPPAAPPPPTDVAQPAANPAAAQSTTDAMSTPGYLEAAKALTALSKELGNTY CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHH AKDVLKSFGVAGLSQIPPELYPTLMERIEGFYIAHERGLPLEAET HHHHHHHHCCCCHHHCCHHHHHHHHHHHCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA