Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682301
Identifier: 182682301
GI number: 182682301
Start: 1980231
End: 1980989
Strand: Reverse
Name: 182682301
Synonym: XfasM23_1784
Alternate gene names: NA
Gene position: 1980989-1980231 (Counterclockwise)
Preceding gene: 182682302
Following gene: 182682300
Centisome position: 78.12
GC content: 47.83
Gene sequence:
>759_bases ATGAATTCGATTTTGTCCATACGCATCAACCAGGCTGCGTGTATCCAGGTCCGTAAGTTTCTATTTTTTCATCTTTGGTT GCCGTTAGTTGGGGTGATGTTGTTATCCGGTCTGTTGATGGGGTTAGCAGGCGATCAGTCGCTAGCTGACTTGTTGTACC GTCTCGAAGGTGGACAGTGGTTGCTTAAGCAGCATTGGATCACCGAGTATCTTATTCATCGTGTTGGTAAGTGGCTTAGT ATCGTTGCTGGGTTGTGCTTATTGGCAGGTATGTTAGTGAGGTGTCGGGGAGGGCTGGCAGGGTGTCGTTATTTGCGTGC GTCTTTGTATGTCGTCGTGACGTTGGTACTGTCTACTAGTCTTATTTCATTGGTAAAACGTCTTACTGGTATGGATTGTC CTTGGGATTTGGTGCGTTATGGCGGTGGATTTCCATTCATTGGTTTGTTTGAGAGTCGCCATGGTTTGAAGGCGTCAGGC TGCTTTCCTGCAGGCCATGCCAGTGCAGGTTATGCTTGGGTGTGCCTGTATTTTGCAGCGTGGGGGGTGTGTCCGGCTTG GCGCTGGTTAGGTTTAATGATCGGTTTGGTTGCTGGTCTTATTTTTGGTATTTCACAGCAGTTGCGTGGTGCACATTTTC TTTCCCATGATCTATGGTCACTGACCATCTGTTGGTTGGTTGCTTTGGGCTTTTTCTACCTCTTTTTTGTTTCTCCCGCA GTAAGGGTAGTCTCTGCGCAACAAAGGGCAATGACATGA
Upstream 100 bases:
>100_bases GAGATTCACATTTTTTCTAATTTTAATCTTCTTTAAGTGGCATTCTTTTATACGTGATACCCAACATTTATATATTGTGT CTATATAGGCATTGACTTAC
Downstream 100 bases:
>100_bases GTTTTTCAACATTTGTTCTTGTGTTACGGCGTCGGATGAGTGAGTTTAACTGGCGTGTGCGCCCGGAAGTTTCTACTGAG AGTGTAGTGCTCTGTACTAG
Product: hypothetical protein
Products: NA
Alternate protein names: PAP2 Family Protein; Phosphoesterase PA-Phosphatase ; Transmembrane Protein; PAP2 Superfamily Protein-Like Protein; PAP2 Superfamily; Phosphoesterase; Pap2 Superfamily Protein-Like Protein; Phosphoesterase PA-Phosphatase-Like; Phosphoesterase PA-Phosphatase Related Protein; PAP2 Superfamily Membrane Protein
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MNSILSIRINQAACIQVRKFLFFHLWLPLVGVMLLSGLLMGLAGDQSLADLLYRLEGGQWLLKQHWITEYLIHRVGKWLS IVAGLCLLAGMLVRCRGGLAGCRYLRASLYVVVTLVLSTSLISLVKRLTGMDCPWDLVRYGGGFPFIGLFESRHGLKASG CFPAGHASAGYAWVCLYFAAWGVCPAWRWLGLMIGLVAGLIFGISQQLRGAHFLSHDLWSLTICWLVALGFFYLFFVSPA VRVVSAQQRAMT
Sequences:
>Translated_252_residues MNSILSIRINQAACIQVRKFLFFHLWLPLVGVMLLSGLLMGLAGDQSLADLLYRLEGGQWLLKQHWITEYLIHRVGKWLS IVAGLCLLAGMLVRCRGGLAGCRYLRASLYVVVTLVLSTSLISLVKRLTGMDCPWDLVRYGGGFPFIGLFESRHGLKASG CFPAGHASAGYAWVCLYFAAWGVCPAWRWLGLMIGLVAGLIFGISQQLRGAHFLSHDLWSLTICWLVALGFFYLFFVSPA VRVVSAQQRAMT >Mature_252_residues MNSILSIRINQAACIQVRKFLFFHLWLPLVGVMLLSGLLMGLAGDQSLADLLYRLEGGQWLLKQHWITEYLIHRVGKWLS IVAGLCLLAGMLVRCRGGLAGCRYLRASLYVVVTLVLSTSLISLVKRLTGMDCPWDLVRYGGGFPFIGLFESRHGLKASG CFPAGHASAGYAWVCLYFAAWGVCPAWRWLGLMIGLVAGLIFGISQQLRGAHFLSHDLWSLTICWLVALGFFYLFFVSPA VRVVSAQQRAMT
Specific function: Unknown
COG id: COG3907
COG function: function code R; PAP2 (acid phosphatase) superfamily protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27944; Mature: 27944
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSILSIRINQAACIQVRKFLFFHLWLPLVGVMLLSGLLMGLAGDQSLADLLYRLEGGQW CCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHH LLKQHWITEYLIHRVGKWLSIVAGLCLLAGMLVRCRGGLAGCRYLRASLYVVVTLVLSTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LISLVKRLTGMDCPWDLVRYGGGFPFIGLFESRHGLKASGCFPAGHASAGYAWVCLYFAA HHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH WGVCPAWRWLGLMIGLVAGLIFGISQQLRGAHFLSHDLWSLTICWLVALGFFYLFFVSPA HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRVVSAQQRAMT HHHHHHHHHCCC >Mature Secondary Structure MNSILSIRINQAACIQVRKFLFFHLWLPLVGVMLLSGLLMGLAGDQSLADLLYRLEGGQW CCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHH LLKQHWITEYLIHRVGKWLSIVAGLCLLAGMLVRCRGGLAGCRYLRASLYVVVTLVLSTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LISLVKRLTGMDCPWDLVRYGGGFPFIGLFESRHGLKASGCFPAGHASAGYAWVCLYFAA HHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH WGVCPAWRWLGLMIGLVAGLIFGISQQLRGAHFLSHDLWSLTICWLVALGFFYLFFVSPA HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRVVSAQQRAMT HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA